Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31967
(691 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC57A7.04c |pabp||mRNA export shuttling protein |Schizosacchar... 125 5e-30
SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr 1|||... 73 4e-14
SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces... 72 7e-14
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 60 3e-10
SPAC22E12.02 |||RNA-binding protein|Schizosaccharomyces pombe|ch... 58 2e-09
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 54 3e-08
SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyce... 53 3e-08
SPAC328.05 |||RNA-binding protein involved in export of mRNAs|Sc... 50 2e-07
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 48 1e-06
SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protei... 48 1e-06
SPBC23E6.01c ||SPBPJ758.01|RNA-binding protein, rrm type|Schizos... 47 3e-06
SPBC1861.04c |||RNA-binding protein Prp24|Schizosaccharomyces po... 44 2e-05
SPBC16E9.12c |pab2||poly|Schizosaccharomyces pombe|chr 2|||Manual 43 4e-05
SPAC17A2.09c |csx1||RNA-binding protein Csx1|Schizosaccharomyces... 43 5e-05
SPBC146.07 |prp2|mis11|U2AF large subunit |Schizosaccharomyces p... 42 8e-05
SPBC660.15 |||mRNA cleavage factor complex subunit |Schizosaccha... 41 2e-04
SPBC29A10.02 |spo5|mrb1, mug12, SPBC365.18|meiotic RNA-binding p... 40 4e-04
SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces po... 39 6e-04
SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 39 6e-04
SPAC3G6.04 |rnp24||RNA-binding protein Rnp24|Schizosaccharomyces... 39 8e-04
SPBC4F6.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 38 0.002
SPBC18H10.03 |tif35||translation initiation factor eIF3g|Schizos... 38 0.002
SPAC2F7.11 |nrd1|msa2|RNA-binding protein Nrd1|Schizosaccharomyc... 37 0.003
SPBC1D7.04 |mlo3||RNA annealing factor Mlo3|Schizosaccharomyces ... 36 0.004
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 35 0.013
SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p... 34 0.022
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 33 0.039
SPBC887.05c |cwf29||RNA-binding protein Cwf29|Schizosaccharomyce... 33 0.051
SPAC23A1.09 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 31 0.16
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 31 0.21
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.36
SPBC16A3.18 |cip1||RNA-binding protein Cip1|Schizosaccharomyces ... 29 0.84
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 29 0.84
SPAC12G12.03 |cip2||RNA-binding protein Cip2|Schizosaccharomyces... 28 1.1
SPBC13G1.14c |||RNA-binding protein|Schizosaccharomyces pombe|ch... 28 1.5
SPAC1952.17c ||SPAC890.01c|GTPase activating protein|Schizosacch... 28 1.5
SPBC18H10.04c |sce3|tif48|translation initiation factor eIF4B|Sc... 27 1.9
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 27 1.9
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 27 3.4
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 3.4
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 27 3.4
SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|c... 26 4.5
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 26 4.5
SPBP16F5.06 |||ribosome biogenesis protein Nop6|Schizosaccharomy... 26 4.5
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 26 5.9
SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces... 26 5.9
SPBC32F12.08c |duo1||DASH complex subunit Duo1 |Schizosaccharomy... 25 7.8
SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|ch... 25 7.8
>SPAC57A7.04c |pabp||mRNA export shuttling protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 653
Score = 125 bits (302), Expect = 5e-30
Identities = 58/85 (68%), Positives = 72/85 (84%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEM 177
NL++KNL D +DDERL+ EF+ FGTITSAK+M E G+SKGFGFVC+++PEEA KAVTEM
Sbjct: 365 NLFIKNLQDEVDDERLKAEFSAFGTITSAKIMTDEQGKSKGFGFVCYTTPEEANKAVTEM 424
Query: 178 NGRIVGTKPLYVALAQRKEDRKAHL 252
N R++ KPLYVALAQRKE R++ L
Sbjct: 425 NQRMLAGKPLYVALAQRKEVRRSQL 449
Score = 68.9 bits (161), Expect = 6e-13
Identities = 32/83 (38%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = +1
Query: 1 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEM 177
N+++KNLD ID++ L F+ FG I S KV +++ G +KG+GFV F S E A A+ +
Sbjct: 169 NVFIKNLDPAIDNKALHDTFSAFGKILSCKVAVDELGNAKGYGFVHFDSVESANAAIEHV 228
Query: 178 NGRIVGTKPLYVALAQRKEDRKA 246
NG ++ K +YV + +R++
Sbjct: 229 NGMLLNDKKVYVGHHVSRRERQS 251
Score = 66.1 bits (154), Expect = 5e-12
Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG-RSKGFGFVCFSSPEEATKAVTEM 177
N+Y+KNLD I ++ F FG ITS ++ + + +GFGFV +++ E A KAV E+
Sbjct: 262 NVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQNDKPRGFGFVNYANHECAQKAVDEL 321
Query: 178 NGRIVGTKPLYVALAQRKEDRKAHL 252
N + K LYV AQ+K +R+ L
Sbjct: 322 NDKEYKGKKLYVGRAQKKHEREEEL 346
>SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr
1|||Manual
Length = 710
Score = 72.9 bits (171), Expect = 4e-14
Identities = 39/84 (46%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Frame = +1
Query: 1 NLYVKNLDDTIDD--ERLRKEFAPFGTITSAKVML--EDGRSKGFGFVCFSSPEEATKAV 168
NLYVKNLDDT+ +L F+PFG+I S+ + G SKG+GFV F E A +A
Sbjct: 383 NLYVKNLDDTVITCKSQLEDLFSPFGSILSSMLACYPNSGISKGYGFVAFRQIEAAVRAK 442
Query: 169 TEMNGRIVGTKPLYVALAQRKEDR 240
+NG +VG K ++V A+RK DR
Sbjct: 443 DTLNGMMVGKKRIFVCFAERKSDR 466
Score = 29.9 bits (64), Expect = 0.36
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 14/84 (16%)
Frame = +1
Query: 4 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG-----RSKGF---------GFVCFS 141
+YV N+D + DE + K F+ +G + S L D ++K F GFV F
Sbjct: 19 IYVGNIDSRLSDEEIIKHFSKYGQVESIFRRLLDSFYPKEKAKPFKPPKNGVQYGFVKFV 78
Query: 142 SPEEATKAVTEMNGRIVGTKPLYV 213
+ E + + + G +G + L +
Sbjct: 79 NAESIEEVLKDAKGMTLGQRKLTI 102
>SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 609
Score = 72.1 bits (169), Expect = 7e-14
Identities = 39/89 (43%), Positives = 56/89 (62%), Gaps = 4/89 (4%)
Frame = +1
Query: 1 NLYVKNLDDTI--DDERLRKEFAPFGTITSAKVMLEDGR--SKGFGFVCFSSPEEATKAV 168
NL+VKNLDD I + ++L + F+ FG I S + SKG+GFV FS P EA +A+
Sbjct: 420 NLFVKNLDDNIVGNTQQLEELFSKFGRIKSCTLASYPSTEISKGYGFVSFSHPFEAVQAI 479
Query: 169 TEMNGRIVGTKPLYVALAQRKEDRKAHLT 255
+NG + G K L+V A+++EDRK L+
Sbjct: 480 NTLNGVLFGKKRLFVNYAEKREDRKKRLS 508
Score = 30.3 bits (65), Expect = 0.27
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 7/68 (10%)
Frame = +1
Query: 1 NLYVKNLDDTIDDERLRKEFAPFGT------ITSAKVMLEDGRSKG-FGFVCFSSPEEAT 159
++YV NL T L + F PFG ++ K D +S F F+ F + A
Sbjct: 21 SIYVGNLPSTCQSSDLHELFEPFGNFSKFHMLSRKKNKSTDSKSPTLFAFITFENKCSAD 80
Query: 160 KAVTEMNG 183
A+ +NG
Sbjct: 81 NAIASLNG 88
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 60.1 bits (139), Expect = 3e-10
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Frame = +1
Query: 1 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTE 174
NL+V NLD +D+ L F+ G + A + D GRSKG+GFV + S E A A+
Sbjct: 100 NLFVGNLDPLVDERVLYDTFSALGQLVKAPQVARDENGRSKGYGFVSYDSFETADAAIEA 159
Query: 175 MNGRIVGTKPLYVALAQRKEDR 240
MN + + KP+ V+ A ++E +
Sbjct: 160 MNNQFLMNKPITVSYAFKREGK 181
>SPAC22E12.02 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 57.6 bits (133), Expect = 2e-09
Identities = 25/74 (33%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Frame = +1
Query: 4 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMN 180
L+V NL + ++DE L + F+ + ++ KV+ + +G+++GFGFV F ++ KA E N
Sbjct: 32 LFVGNLGNDVNDESLYQAFSEYPSLVKTKVVRDREGKTRGFGFVSFKDSDQFLKAWREKN 91
Query: 181 GRIVGTKPLYVALA 222
G+ +G++P+ ++ A
Sbjct: 92 GKYIGSRPVKLSRA 105
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 53.6 bits (123), Expect = 3e-08
Identities = 29/70 (41%), Positives = 45/70 (64%), Gaps = 7/70 (10%)
Frame = +1
Query: 4 LYVKNLDDTIDDERLRKEFAPFGTITSAKVML--EDGRSKGFGFVCFSSPEEATKAVT-- 171
++V L +DD+ L +EF +GTI A+V++ + GRSKG+G+V F +PE A AV
Sbjct: 265 VFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAKAAVAAN 324
Query: 172 ---EMNGRIV 192
E++GR+V
Sbjct: 325 GTKEIDGRMV 334
Score = 42.7 bits (96), Expect = 5e-05
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +1
Query: 4 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 177
++V NL ++ L F G I S ++ + GR KGFG+V FS + A K V EM
Sbjct: 368 VFVGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKKCV-EM 426
Query: 178 NGRIVGTKP 204
NG + +P
Sbjct: 427 NGHFIAGRP 435
>SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 297
Score = 53.2 bits (122), Expect = 3e-08
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Frame = +1
Query: 1 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTE 174
+L+V + + ++ L++ F+ FGT+T ++M E S+GFGF+ FS+ EEAT A+
Sbjct: 102 DLFVSGIASRMQEDELQQIFSKFGTVTHVRIMREPVTKASRGFGFLSFSTVEEATSAIDN 161
Query: 175 MNGRIVGTKPLYVALAQR 228
+N + + L V A+R
Sbjct: 162 LNSQEFYGRVLNVQKAKR 179
>SPAC328.05 |||RNA-binding protein involved in export of
mRNAs|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 50.4 bits (115), Expect = 2e-07
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +1
Query: 4 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMN 180
+YV NL D L F G++ A++ E GRSKGFG V F + +A ++ ++N
Sbjct: 282 IYVGNLPWATSDRNLLDLFTDIGSVIRARIAYEPTGRSKGFGVVQFENENDAASSIEKLN 341
Query: 181 GRIVGTKPLYVALA 222
G G +PL ++ A
Sbjct: 342 GYRYGGRPLQLSYA 355
Score = 31.1 bits (67), Expect = 0.16
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +1
Query: 46 LRKEFAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 222
L+ F G++ A + + ++GRS+G G V SS +EA A+ ++ + L V L
Sbjct: 199 LKDLFRQAGSVIRADIQMNQEGRSRGIGIVVMSSMKEAMHAIQMLHNTDFMGRTLEVRL- 257
Query: 223 QRKEDRKAH 249
DR AH
Sbjct: 258 ----DRFAH 262
Score = 30.3 bits (65), Expect = 0.27
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +1
Query: 4 LYVKNLDDTIDDERLRKEFAPFGTITSAKVM-LEDGRSKGFGFVCFSSPEEATKAV-TEM 177
+YV NL + L++ G + + +++ L +G SKG + +S+ EEA A+ T
Sbjct: 68 VYVGNLSYQVRWFELKEFMGQVGNVLNCEILNLPNGLSKGCAIIEYSTAEEARTAIKTLS 127
Query: 178 NGRIVG 195
N + +G
Sbjct: 128 NQKFMG 133
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 48.0 bits (109), Expect = 1e-06
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +1
Query: 4 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMN 180
L V N+ + DE ++ F PFG I + +D RSKGFG++ + +P A A+ +MN
Sbjct: 342 LCVSNIHFNLTDEDVKAIFEPFGDIEFVHLQRDDQNRSKGFGYIQYRNPISARNALEKMN 401
Query: 181 GRIVGTKPLYVALAQRK 231
G + + + V L K
Sbjct: 402 GFDLAGRNMRVCLGNDK 418
>SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protein
Tgc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 348
Score = 48.0 bits (109), Expect = 1e-06
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Frame = +1
Query: 10 VKNLDDTIDDERLR---KEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 180
+K + D + R R + P+ I K+ E R +GFGFV F++ E+ ++A+ EMN
Sbjct: 221 LKEMFDAYNPTRARIAVRSLPPY-IIRRIKLRGEQRRGRGFGFVSFANAEDQSRAIEEMN 279
Query: 181 GRIVGTKPLYVALAQRKEDRK 243
G+ VG L V A +ED++
Sbjct: 280 GKQVGDLTLVVKSAVFREDKQ 300
Score = 30.7 bits (66), Expect = 0.21
Identities = 18/85 (21%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Frame = +1
Query: 4 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRS------KGFGFVCFSSPEEATKA 165
++V L + +R F GT+ + R G FV F++ E+ KA
Sbjct: 46 VFVGRLSTSTKKSEIRSLFETVGTVRKVTIPFRRVRRGTRLVPSGIAFVTFNNQEDVDKA 105
Query: 166 VTEMNGRIVGTKPLYVALAQRKEDR 240
+ +NG+ + + + V A+ +++
Sbjct: 106 IETLNGKTLDDREIVVQKARPVQEQ 130
>SPBC23E6.01c ||SPBPJ758.01|RNA-binding protein, rrm
type|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 46.8 bits (106), Expect = 3e-06
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Frame = +1
Query: 1 NLYVKNLDDTIDDERLRKEFAP-FGTITSAKVMLEDGR--SKGFGFVCFSSPEEATKAVT 171
+++V +L +++ + FA + + SAK+M + S+G+GFV F+ + A+
Sbjct: 187 SIFVGDLSPNVNEFDVYSLFASRYNSCKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALA 246
Query: 172 EMNGRIVGTKPLYVALAQRKEDRKAHL 252
EM G+I G +P+ V LA K KAH+
Sbjct: 247 EMQGQICGDRPIRVGLATPKS--KAHV 271
>SPBC1861.04c |||RNA-binding protein Prp24|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1014
Score = 44.4 bits (100), Expect = 2e-05
Identities = 21/77 (27%), Positives = 45/77 (58%)
Frame = +1
Query: 4 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 183
LYV N+D ++++ + F +G + S ++ + KGFG+V ++ ++A A++ G
Sbjct: 759 LYVTNIDFKVNEKDVETFFRDYGQVESVRIPKRFNQHKGFGYVVMTTNQDAENALSAA-G 817
Query: 184 RIVGTKPLYVALAQRKE 234
+ +G + L V L++ +E
Sbjct: 818 KQLGNRVLNVVLSKPRE 834
Score = 28.3 bits (60), Expect = 1.1
Identities = 21/71 (29%), Positives = 37/71 (52%)
Frame = +1
Query: 1 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 180
+L V N+D T+++ RLR F +G + +V+L +G V F +A KA +
Sbjct: 875 SLGVTNVDGTVNEARLRSLFESYGKL--YRVVLHP-EHEG-AVVEFLDIHDAGKASLALE 930
Query: 181 GRIVGTKPLYV 213
G +G + L++
Sbjct: 931 GHEIGGRLLHI 941
>SPBC16E9.12c |pab2||poly|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 43.2 bits (97), Expect = 4e-05
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Frame = +1
Query: 1 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTE 174
++YV N+D ++ E L+ FA G++ ++ + G KGF ++ FS P A+
Sbjct: 56 SVYVGNVDYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKGFAYIEFSEPSLVPNALL- 114
Query: 175 MNGRIVGTKPLYV 213
+NG ++ +PL V
Sbjct: 115 LNGSMLHERPLKV 127
>SPAC17A2.09c |csx1||RNA-binding protein Csx1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 632
Score = 42.7 bits (96), Expect = 5e-05
Identities = 24/71 (33%), Positives = 37/71 (52%)
Frame = +1
Query: 4 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 183
++V L + ++ L+ F PFG I + K+ KG GFV +S A KA+ M G
Sbjct: 299 VFVGGLASNLSEKDLQVCFQPFGRILNIKIPF----GKGCGFVQYSEKSAAEKAINTMQG 354
Query: 184 RIVGTKPLYVA 216
+VGT + +A
Sbjct: 355 ALVGTSHIRLA 365
Score = 42.3 bits (95), Expect = 6e-05
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Frame = +1
Query: 1 NLYVKNLDDTIDDERLRKEFAP-FGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVT 171
+++V +L T +D L F + + TSAK++++ G S+ +GFV FSS +E A+
Sbjct: 183 SIFVGDLLPTTEDSDLFMTFRSIYPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHALM 242
Query: 172 EMNGRIVGTKPLYVALAQRK 231
M G + +PL +++A K
Sbjct: 243 HMQGYLCQGRPLRISVASPK 262
>SPBC146.07 |prp2|mis11|U2AF large subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 517
Score = 41.9 bits (94), Expect = 8e-05
Identities = 19/63 (30%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Frame = +1
Query: 4 LYVKNLDDTIDDERLRKEFAPFGTITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEM 177
+Y+ NL + ++++ + PFG + S +++ + DG SKGF F F +P +A A++ +
Sbjct: 312 IYISNLPLNLGEDQVVELLKPFGDLLSFQLIKNIADGSSKGFCFCEFKNPSDAEVAISGL 371
Query: 178 NGR 186
+G+
Sbjct: 372 DGK 374
>SPBC660.15 |||mRNA cleavage factor complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 40.7 bits (91), Expect = 2e-04
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Frame = +1
Query: 4 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTE- 174
+++ L+ D+ LR F FG + VM + GRS+GFGF+ F +P+ + +++
Sbjct: 165 MFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEVMSKE 224
Query: 175 --MNGRIVGTK 201
++G+I+ K
Sbjct: 225 HHLDGKIIDPK 235
Score = 36.7 bits (81), Expect = 0.003
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Frame = +1
Query: 4 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEM 177
++V + +E R F FG + A +M++ GR +GFGFV + + E A +A
Sbjct: 249 MFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFGFVTYEN-ESAVEATMSQ 307
Query: 178 NGRIVGTKPLYVALAQRKED-RKAH 249
+ KP+ V A K R +H
Sbjct: 308 PYITIHGKPVEVKRATPKASLRDSH 332
>SPBC29A10.02 |spo5|mrb1, mug12, SPBC365.18|meiotic RNA-binding
protein 1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 567
Score = 39.5 bits (88), Expect = 4e-04
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 1 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVML--EDGRSKGFGFVCFSSPEEATKAVTE 174
N+Y++ L DE L FG ++S+K ++ E KG+GF CF + A ++
Sbjct: 297 NVYIRGLPPNTSDENLLLYTNRFGKVSSSKAIIDMETNLCKGYGFACFEEEKSALICISA 356
Query: 175 M 177
M
Sbjct: 357 M 357
Score = 28.3 bits (60), Expect = 1.1
Identities = 18/83 (21%), Positives = 35/83 (42%), Gaps = 2/83 (2%)
Frame = +1
Query: 1 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 180
NLY+ NL ++ + F P I++ + +S+G GF + A + + N
Sbjct: 385 NLYISNLPLHWNESDISTLFKPSKIISNRVLRDSKEQSRGVGFARMQDRKTAEDIINKFN 444
Query: 181 GRIV--GTKPLYVALAQRKEDRK 243
++ PL + A + +K
Sbjct: 445 NFVLDPALPPLQIRFADSTDQKK 467
>SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 833
Score = 39.1 bits (87), Expect = 6e-04
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Frame = +1
Query: 4 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED-----GR--SKGFGFVCFSSPEEATK 162
+YVKNL+ + E +K F P SA + + G+ S GFGFV F A
Sbjct: 621 IYVKNLNFSTKQEEFQKVFKPLEGYLSAVIRAKPDPKRPGKYLSMGFGFVEFKDKASAVA 680
Query: 163 AVTEMNGRIVGTKPLYVALAQRKEDRKAHL 252
A+ MNG ++ L + L+ + D A +
Sbjct: 681 AMHAMNGFVLDGHKLEIKLSHQGVDAAAEV 710
Score = 36.3 bits (80), Expect = 0.004
Identities = 18/78 (23%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 4 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 177
L+++NL + ++ L+ F PFG + + ++ KGF ++ F ++A +A E+
Sbjct: 325 LFLRNLTYSCAEDDLKSLFGPFGQLEQVHMPIDKKTNNPKGFAYIDFHDADDAVRAYLEL 384
Query: 178 NGRIVGTKPLYVALAQRK 231
+ + + L+V A+ +
Sbjct: 385 DAKPFQGRLLHVLPAKAR 402
Score = 30.3 bits (65), Expect = 0.27
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 7/87 (8%)
Frame = +1
Query: 4 LYVKNLDDTIDDERLRKEFAPF----GTITSAKVM-LEDGRSKGFGFVCFSSPEEATKAV 168
+ +KN+ D E+L IT V ++G S+ F F+ F + E+A KA+
Sbjct: 4 IIIKNIPRYYDKEKLSTYLKSLPQLDAEITDVSVAKTKEGVSRRFAFIGFKNEEDADKAI 63
Query: 169 TEMNGRIVGTKPLYV--ALAQRKEDRK 243
+N V T + V AL R + K
Sbjct: 64 RYLNKSYVETSRIEVHRALDYRSANEK 90
>SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 422
Score = 39.1 bits (87), Expect = 6e-04
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +1
Query: 4 LYVKNLDDTIDDERLRKEFAPFGTITSAKVML--EDGRSKGFGFVCFSSPEEATKAVTEM 177
+YV N+ + +E++ F G + S ++++ E G+ KG+GF + P A AV +
Sbjct: 7 VYVGNIPYEMAEEQVIDIFKQSGPVKSFQLVIDPESGQPKGYGFCEYHDPATAASAVRNL 66
Query: 178 NGRIVGTKPLYV 213
N GT+ L V
Sbjct: 67 NNYDAGTRRLRV 78
>SPAC3G6.04 |rnp24||RNA-binding protein Rnp24|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 369
Score = 38.7 bits (86), Expect = 8e-04
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +1
Query: 4 LYVKNLDDTIDDERLRKEFAPFGTITSAKVM-LED-GRSKGFGFVCFSSPEEATKAV 168
L+V NLD D L++ F G I ++M ED G+ KGFGFV F + KA+
Sbjct: 230 LFVGNLDFETTDADLKEHFGQVGQIRRVRLMTFEDTGKCKGFGFVDFPDIDTCMKAM 286
>SPBC4F6.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 674
Score = 37.5 bits (83), Expect = 0.002
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +1
Query: 4 LYVKNLDDTIDD-ERLRKEFAPFGTITSAKVMLEDG-RSKGFGFVCFSSPEEATKAVTEM 177
L ++NL +I + L F+ FG + K+ + G R GF FV + A +A+ +
Sbjct: 109 LIIRNLPWSIKKPQHLEPHFSKFGKVREIKIPTKGGGRMCGFAFVWMKDRKAAEEAMNSL 168
Query: 178 NGRIVGTKPLYVALAQRKE 234
NG + +P+ V A K+
Sbjct: 169 NGTEIDGRPIAVDWAVSKD 187
Score = 36.7 bits (81), Expect = 0.003
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +1
Query: 22 DDTIDDERLRKEFAPFGTITSAKVMLED---GRSKGFGFVCFSSPEEATKAVTEMNGRIV 192
++ +D K G + AKV E GRSKGFGF+ F S + A A+ +NGR +
Sbjct: 505 EENLDKGHRLKRGKSGGVLKQAKVETEKAGAGRSKGFGFMQFISHKYALMALRWLNGREI 564
Query: 193 GTKPL 207
K +
Sbjct: 565 TVKKI 569
>SPBC18H10.03 |tif35||translation initiation factor
eIF3g|Schizosaccharomyces pombe|chr 2|||Manual
Length = 282
Score = 37.5 bits (83), Expect = 0.002
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 4 LYVKNLDDTIDDERLRKEFAPFGTITSAKVML--EDGRSKGFGFVCFSSPEEATKAVTEM 177
L V NL D +E LR F FG I + E GR+KGF FV + + A KA +
Sbjct: 204 LRVTNLSDDTREEELRDLFRRFGGIQRVYLAKDKETGRAKGFAFVSYYDRDCAIKARDRL 263
Query: 178 NG 183
+G
Sbjct: 264 DG 265
>SPAC2F7.11 |nrd1|msa2|RNA-binding protein Nrd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 529
Score = 36.7 bits (81), Expect = 0.003
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +1
Query: 1 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAV 168
N+Y+ N DD++ ERL+++F FG I R K FV F+S A A+
Sbjct: 415 NIYIGNADDSLTIERLKEDFEEFGEIEYVNFF----REKNCAFVNFTSLASAINAI 466
>SPBC1D7.04 |mlo3||RNA annealing factor Mlo3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 199
Score = 36.3 bits (80), Expect = 0.004
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +1
Query: 103 DGRSKGFGFVCFSSPEEATKAVTEMNGRIV-GTKPLYVAL 219
+GRSKG + FS P +AT+A + GR+V GT+ + V +
Sbjct: 92 NGRSKGIATIIFSRPGDATRAYEQYEGRLVDGTRKMKVEI 131
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 34.7 bits (76), Expect = 0.013
Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 5/94 (5%)
Frame = +1
Query: 406 TPRWNAQPPVRPITQAASAYANMQPTYRPAPRA---PAQSTIRTSLGA--RPITGQQGVA 570
TP + PP+ P ++ + PAP P+ T+ + + RPI
Sbjct: 223 TPTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNP 282
Query: 571 AAAASIRPPLLSQSSRPANYKYTPNMRNPPAPQP 672
A ++ +PPL SSR + N + PP P P
Sbjct: 283 AINSTSKPPLPPPSSRVSAAALAANKKRPPPPPP 316
Score = 31.5 bits (68), Expect = 0.12
Identities = 34/120 (28%), Positives = 48/120 (40%), Gaps = 1/120 (0%)
Frame = +1
Query: 316 PSGASGFFVPSLPPAPRYYGPAQMTQIRPTTPRWNAQPPVRPITQAASAYANMQPTYRPA 495
PS + P+ PP P P M +T ++PP+ P + SA A RP
Sbjct: 259 PSNGTVSSPPNSPPRP--IAPVSMNPAINST----SKPPLPPPSSRVSAAALAANKKRPP 312
Query: 496 PRAPAQSTIRTSLGARPITGQQGVAAAAASIRPPLLSQSSRPA-NYKYTPNMRNPPAPQP 672
P P R + G PI G ++ +S+ PP S A + P R+ P P P
Sbjct: 313 PPPPPS---RRNRGKPPI----GNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPP 365
Score = 31.1 bits (67), Expect = 0.16
Identities = 26/84 (30%), Positives = 31/84 (36%), Gaps = 1/84 (1%)
Frame = +1
Query: 343 PSLPPAPRYYGPAQMTQIRPTTPRWNAQPPVRPITQAASAYANMQPTYRPA-PRAPAQST 519
PSLPP+ P + P P P+ P A A P PA P APA +
Sbjct: 429 PSLPPS----APPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Query: 520 IRTSLGARPITGQQGVAAAAASIR 591
+ Q G A ASIR
Sbjct: 485 AAPVASIAELPQQDGRANLMASIR 508
>SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 275
Score = 33.9 bits (74), Expect = 0.022
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +1
Query: 4 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGR-SKGFGFVCFSSPEEATKAVTEMN 180
LYV D + L EF PFG + + + R S+ F FV + +A A E++
Sbjct: 9 LYVTGFRDGMRARELAYEFEPFGPLIRCDIPIPRTRTSRPFAFVEYEDSRDAEDAYYEVH 68
Query: 181 GR 186
GR
Sbjct: 69 GR 70
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 33.1 bits (72), Expect = 0.039
Identities = 35/104 (33%), Positives = 48/104 (46%), Gaps = 1/104 (0%)
Frame = +1
Query: 379 AQMTQIRPTTPRWNAQPPVRPITQAASAYANMQPTYRPAPRAPAQSTIRTSLGARPITGQ 558
AQ TQ RP P A+P TQAA+ + T + A +T+ S A P T
Sbjct: 1019 AQQTQNRPPAPAMQARPNT---TQAAAPVTSTTTTIKQA------TTVSASKPA-PST-- 1066
Query: 559 QGVAAAAASIRPPLLSQSSRP-ANYKYTPNMRNPPAPQPAVHIQ 687
V +AA+S P +S+ S P AN P+ PP P P ++
Sbjct: 1067 --VTSAASS--PSNISKPSAPVANNVSKPSAVPPPPPPPPAEVE 1106
>SPBC887.05c |cwf29||RNA-binding protein Cwf29|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 217
Score = 32.7 bits (71), Expect = 0.051
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +1
Query: 4 LYVKNLDDTIDDERLRKEFAPFGTITSAKVML--EDGRSKGFGFVCFSSPEEATKAVTEM 177
+Y+ NLD ++++ + F+ FG ++ E G+SKGF F+ + AV M
Sbjct: 33 IYIGNLDFDLNEDDILCVFSEFGEPVDINLVRDKETGKSKGFAFLKYEDQRSTVLAVDNM 92
>SPAC23A1.09 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 121
Score = 31.1 bits (67), Expect = 0.16
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +1
Query: 37 DERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTK 201
+E++ FA FG + + + L+ G KG+ + +++ E+A KAV E N ++ K
Sbjct: 23 EEQVEDLFADFGPVKNLHLNLDRRTGYVKGYALIEYATLEQAQKAVDEKNLSLLDEK 79
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 30.7 bits (66), Expect = 0.21
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +1
Query: 376 PAQMTQIRPTTPRWNAQPPVRPITQAASAYANMQP---TYRPAPRAPAQSTIRTSLGARP 546
PA + P ++ P P++ AASAY++ P R P APA ++ SL ++P
Sbjct: 218 PASPKSVSPDLVYVSSDNP--PVSTAASAYSSSLPISDVTRALPLAPASNSQHPSLSSQP 275
Query: 547 IT 552
++
Sbjct: 276 VS 277
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.9 bits (64), Expect = 0.36
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 8/122 (6%)
Frame = +1
Query: 343 PSLPPA-PRYYGPAQMTQIRPTTPRWNAQPPVRPITQAASAYANMQPTYRPAPRAPAQST 519
PS P + P PA P P+ +++ P P+ A + + T P P +
Sbjct: 992 PSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPP 1051
Query: 520 I-RTSLGAR------PITGQQGVAAAAASIRPPLLSQSSRPANYKYTPNMRNPPAPQPAV 678
+ ++S GA P + + A S PP+ + S P K P++ PP P+P+V
Sbjct: 1052 VPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPK--PSVAAPPVPKPSV 1109
Query: 679 HI 684
+
Sbjct: 1110 AV 1111
Score = 27.5 bits (58), Expect = 1.9
Identities = 25/111 (22%), Positives = 38/111 (34%)
Frame = +1
Query: 343 PSLPPAPRYYGPAQMTQIRPTTPRWNAQPPVRPITQAASAYANMQPTYRPAPRAPAQSTI 522
P+ PP+ P PT+ PP P+++ S P P R P +
Sbjct: 963 PAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVST----SPA-APLARVPPVPKL 1017
Query: 523 RTSLGARPITGQQGVAAAAASIRPPLLSQSSRPANYKYTPNMRNPPAPQPA 675
+ P+ S PP+ +S P K + + P P PA
Sbjct: 1018 SSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPA 1068
>SPBC16A3.18 |cip1||RNA-binding protein Cip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 490
Score = 28.7 bits (61), Expect = 0.84
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +1
Query: 4 LYVKNLDDTIDDERLRKEFAPFGTIT--SAKVMLEDGRSKGFGFVCFSSPEEATKAVTEM 177
+ VKN+ +++ + L F G + ++G +G F F PEEA V +
Sbjct: 204 IVVKNIPFSLEKDTLLDHFKQLGIPRPYAFNYHYDNGIFRGLAFANFYRPEEAQVVVQTL 263
Query: 178 NGRIVGTKPLYV 213
NG + + L V
Sbjct: 264 NGYEINGRRLRV 275
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 28.7 bits (61), Expect = 0.84
Identities = 24/84 (28%), Positives = 29/84 (34%), Gaps = 2/84 (2%)
Frame = +1
Query: 430 PVRPITQAASAYANMQPTYR--PAPRAPAQSTIRTSLGARPITGQQGVAAAAASIRPPLL 603
P P ++ + P+Y AP PA S + P Q AA PP
Sbjct: 48 PPPPSVDHSAPPSGPPPSYSNSAAPATPAASASSAAPAPAPAASQNRAYGAAPQPYPP-- 105
Query: 604 SQSSRPANYKYTPNMRNPPAPQPA 675
Q P Y PN N QPA
Sbjct: 106 -QGGYPQQPYYYPNQPNYYPAQPA 128
>SPAC12G12.03 |cip2||RNA-binding protein Cip2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 576
Score = 28.3 bits (60), Expect = 1.1
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +1
Query: 4 LYVKNLDDTIDDERLRKEFAPFGTIT--SAKVMLEDGRSKGFGFVCFSSPEEATKAVTEM 177
+ +KN+ ++ E L K F + ++G +G F F SPEEA V +
Sbjct: 234 IVIKNIPFSLKKEVLFKVFTALDIPRPYAFNYHFDNGVFRGLAFANFHSPEEAKTVVQVL 293
Query: 178 NG 183
NG
Sbjct: 294 NG 295
>SPBC13G1.14c |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 243
Score = 27.9 bits (59), Expect = 1.5
Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +1
Query: 4 LYVKNLDDTIDDERLRKEFAPFGTITSA--KVMLEDGRSKGFGFVCFSSPEEATKAVTEM 177
+ V+NL + E + + F +G I + + +KG+ ++ + ++A AV +M
Sbjct: 101 ILVENLTRNVTKEHIAEIFGIYGLIDHIFMPIYKKSELNKGYCYIEYVYHDQAANAVDKM 160
Query: 178 NGRIVGTKPLYVAL 219
N + + L+V++
Sbjct: 161 NNAELDGEELFVSI 174
>SPAC1952.17c ||SPAC890.01c|GTPase activating
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 619
Score = 27.9 bits (59), Expect = 1.5
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +2
Query: 263 TCREWLVCACSKWAKYSSLVVQVDFLYHRSLQH 361
T + +C C + ++ ++VQV LY ++L H
Sbjct: 288 TYENYYLCECDAFFLFTQMMVQVRDLYEKTLDH 320
>SPBC18H10.04c |sce3|tif48|translation initiation factor
eIF4B|Schizosaccharomyces pombe|chr 2|||Manual
Length = 388
Score = 27.5 bits (58), Expect = 1.9
Identities = 32/165 (19%), Positives = 71/165 (43%), Gaps = 7/165 (4%)
Frame = +1
Query: 76 ITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ--RKEDRK 243
+TS +++++ RS+GFG+V F + + + A+ ++G + +P+ + +A+ R R+
Sbjct: 118 VTSIRLVIDPLTERSRGFGYVEFETADTLSAALA-LSGEDLMGRPVRITVAEPRRSFARE 176
Query: 244 AHLTXXXXXXXXXXXXXXXXXIF--QPSGASGFFVPSLPPAPRY-YGPAQMTQIRPTTPR 414
T F + + + F P+ P+ R P + + P PR
Sbjct: 177 ERSTGDWVRRGPLPPAEPAESPFGKRRTNSGRFRDPARDPSDRVREEPREWVRRGPLPPR 236
Query: 415 WNAQPPVRPITQAASAYANMQPTYRPAPRAPAQSTIRTSLGARPI 549
+++ P + +S+ N + T ++ GA+P+
Sbjct: 237 ESSERPRLNLKPRSSSNVNTEATPSATTTTSSKPKRDPFGGAKPV 281
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 27.5 bits (58), Expect = 1.9
Identities = 27/108 (25%), Positives = 37/108 (34%), Gaps = 4/108 (3%)
Frame = +1
Query: 343 PSLPPAPRYYGPAQMTQIRPTTPRWN-AQPPVRPITQAASAYANMQPTYRPAPRAPAQST 519
P +P P ++ P + P P ++PPV P + N P P P S
Sbjct: 156 PPVPQVPSHWYPVSLPS--PNLPHQPISKPPVIPNLPKLQVHPNRLP--HPIHNHPYSSP 211
Query: 520 IRTSLGARPIT---GQQGVAAAAASIRPPLLSQSSRPANYKYTPNMRN 654
P T A A +I P S + NY TP+ N
Sbjct: 212 TSYPPPLCPATYCPSNPPQLAPATAIAPSSQSSQHKSVNYSVTPSSIN 259
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 26.6 bits (56), Expect = 3.4
Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 7/88 (7%)
Frame = +1
Query: 346 SLPPAPRYYGPAQMTQIRPTTPRWN----AQPPVR--PITQAASAYANMQPTYRPAPRAP 507
S P P+ + RP T N AQP V Y QP+Y P P
Sbjct: 226 STAPNPQEINYQWSHEYRPHTQYQNNLLRAQPNVNCENFPTTVPNYPFQQPSYNPNALVP 285
Query: 508 AQSTIRTSLGARP-ITGQQGVAAAAASI 588
+ +T+ + L P +T G + A+SI
Sbjct: 286 SYTTLVSQLPPSPCLTVSSGPLSTASSI 313
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 3.4
Identities = 28/115 (24%), Positives = 44/115 (38%), Gaps = 11/115 (9%)
Frame = +1
Query: 316 PSGASGFFVPSLPPAPRYYGPAQMTQIRPTTPRWNAQPPVRPITQAAS---------AYA 468
PS + SLP +P+ P+ + + T + N + +T A++ ++
Sbjct: 152 PSNSGLSLDKSLPSSPKGDSPSLSSSLPSLTTKSNLSGNLNMVTPASTQGPAFSSKHGFS 211
Query: 469 NMQPTYRPAP--RAPAQSTIRTSLGARPITGQQGVAAAAASIRPPLLSQSSRPAN 627
N T P P + ST T A A +SI PP S S+ P N
Sbjct: 212 NALSTASPIPVRTSSVSSTYLTQDREASSKNCLSKALAFSSIEPPASSASTSPRN 266
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 26.6 bits (56), Expect = 3.4
Identities = 23/104 (22%), Positives = 39/104 (37%)
Frame = +1
Query: 313 QPSGASGFFVPSLPPAPRYYGPAQMTQIRPTTPRWNAQPPVRPITQAASAYANMQPTYRP 492
+PS ++ +P P G + + P+ Q AA+ Y Q + P
Sbjct: 312 EPSSSTATDIPPPYSTPSVAGASDYST--PSAGYQTVQTTTTTTEAAAAQYP--QAAFPP 367
Query: 493 APRAPAQSTIRTSLGARPITGQQGVAAAAASIRPPLLSQSSRPA 624
P P + + P+ AAAA + PP + ++ PA
Sbjct: 368 PPVMPQPAAAAVTT---PVAAPVAAAAAAVPVPPPAPAPAAAPA 408
>SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|chr
2|||Manual
Length = 658
Score = 26.2 bits (55), Expect = 4.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 550 TGQQGVAAAAASIRPPLLSQSSRPANYKYTPNMRNPP 660
T Q +A++A S P +Q SRPA P+ PP
Sbjct: 548 TTQSVLASSAPSAGRPAAAQISRPAQLFRIPSTNPPP 584
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 26.2 bits (55), Expect = 4.5
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Frame = +1
Query: 487 RPAPRAPAQSTIRTSLGARPITGQQGVAAAAASIR----PPLLSQSSRPANY 630
R A AP ++ + TS + P T G A+ + PL SQSSR +NY
Sbjct: 17 RTAYAAPQRAAVDTSNVSPPSTQTGGYASKDTTSTYEGAQPLSSQSSRSSNY 68
>SPBP16F5.06 |||ribosome biogenesis protein Nop6|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 478
Score = 26.2 bits (55), Expect = 4.5
Identities = 12/53 (22%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 4 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED---GRSKGFGFVCFSSPEE 153
+YV L +I+ L F+ FG++++ +++ + G + F ++ F + E+
Sbjct: 7 IYVGGLSSSIESSDLESRFSRFGSVSNLEIINKSTPVGTIQRFAYLNFRTDED 59
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 25.8 bits (54), Expect = 5.9
Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 1/83 (1%)
Frame = +1
Query: 427 PPVRPITQAASAYANMQPTYRPAPRAPAQSTIRTSLGARPITGQQGVAAAAAS-IRPPLL 603
PPV P + +A + PAP ++ + T A A+AS + L
Sbjct: 351 PPVNPTIKVTAAIPSPLQNTNPAPSTFPNPSVASPAFPNSSTSNPSTAPASASPLASTLK 410
Query: 604 SQSSRPANYKYTPNMRNPPAPQP 672
++ N + + NP P
Sbjct: 411 PSTANDTNGSSSSSSSNPRTSSP 433
>SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 745
Score = 25.8 bits (54), Expect = 5.9
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +1
Query: 424 QPPVRPITQAASAYANMQPTYRPAPRAPAQSTIRTSLGARPI 549
QP + P Q + T++P PR P Q + T RP+
Sbjct: 700 QPTLHPQGQLPIQNVEQRATHKPLPRPPVQ--VETREPVRPV 739
>SPBC32F12.08c |duo1||DASH complex subunit Duo1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 166
Score = 25.4 bits (53), Expect = 7.8
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 427 PPVRPITQAASAYANMQPTYRP 492
P VRP +AAS+Y +P++ P
Sbjct: 134 PKVRPARRAASSYVPSRPSHVP 155
>SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 867
Score = 25.4 bits (53), Expect = 7.8
Identities = 31/131 (23%), Positives = 49/131 (37%), Gaps = 11/131 (8%)
Frame = +1
Query: 325 ASGFFVPSL--PPAPRYYGPAQMTQIRPT------TPRWNAQPPVRPITQA-ASAYANMQ 477
++GF P+ P+P+ Y + PT + N+ P V ++ S
Sbjct: 260 SAGFRPPTFFSSPSPQPYSGPILASTAPTLDGSYLSNPSNSNPAVMSLSSNFPSPPKPNN 319
Query: 478 PTYRPAPRAPAQSTIRTSLGARPITGQQGVAAAAASIRPPLLSQ--SSRPANYKYTPNMR 651
P Y P PR R S IT S P L+ +S P+ P +
Sbjct: 320 PVYLP-PRGNPTVNDRVSNVLPSITSFDSSVTTVPSNSPATLNSYTTSVPSGMSRHPMLM 378
Query: 652 NPPAPQPAVHI 684
NP P+P++ +
Sbjct: 379 NPSTPEPSLGV 389
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.131 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,926,932
Number of Sequences: 5004
Number of extensions: 60740
Number of successful extensions: 296
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 285
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 319939482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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