Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31962
         (735 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    24   1.7  
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    24   1.7  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   6.9  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   9.1  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   9.1  

>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +3

Query: 126 FTLAKNREKWNSAAVVTPIVTSTTFKQPAPAEHT 227
           F L+KN ++W   +       + TFK   P E T
Sbjct: 37  FELSKNGDEWTFTSSSGDNTYTKTFKMNVPFEET 70


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +3

Query: 126 FTLAKNREKWNSAAVVTPIVTSTTFKQPAPAEHT 227
           F L+KN ++W   +       + TFK   P E T
Sbjct: 39  FELSKNGDEWTFTSSSGDNTYTKTFKMNVPFEET 72


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -2

Query: 236 FKTRMFGRCWLFECSG 189
           F   +FG  W+F C G
Sbjct: 57  FSLPIFGTRWIFSCIG 72


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
 Frame = -1

Query: 180 WV*PRLLNSIFPGSWPA*IAIVAKPGFCFRN-PVI--CHPNFIFDVFVIASLTNIFLTK 13
           W   R+ + +F  ++   IA++ +P   +   P I   +PN+ FD  VI    N+ +++
Sbjct: 130 WARLRMNSGMFTTAFS--IAVLYRPDTKYMKFPAIYEIYPNYFFDSSVIEEAQNLKMSR 186


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
 Frame = -1

Query: 180 WV*PRLLNSIFPGSWPA*IAIVAKPGFCFRN-PVI--CHPNFIFDVFVIASLTNIFLTK 13
           W   R+ + +F  ++   IA++ +P   +   P I   +PN+ FD  VI    N+ +++
Sbjct: 130 WARLRMNSGMFTTAFS--IAVLYRPDTKYMKFPAIYEIYPNYFFDSSVIEEAQNLKMSR 186


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,997
Number of Sequences: 438
Number of extensions: 5149
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)