Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31955
(612 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 24 1.3
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 24 1.3
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 23 1.8
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 23 1.8
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 23 1.8
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 23 1.8
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 23 1.8
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 23 3.1
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 23 3.1
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 23 3.1
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 4.1
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 5.4
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 21 7.2
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 23.8 bits (49), Expect = 1.3
Identities = 10/30 (33%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = -1
Query: 201 NNLRINFVTK-SLLCSSHNDNKRLYFNLTY 115
++L N+++ S +++N NK+LY+N+ Y
Sbjct: 83 SSLSNNYISNISNYNNNNNYNKKLYYNINY 112
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 23.8 bits (49), Expect = 1.3
Identities = 10/30 (33%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = -1
Query: 201 NNLRINFVTK-SLLCSSHNDNKRLYFNLTY 115
++L N+++ S +++N NK+LY+N+ Y
Sbjct: 321 SSLSNNYISNISNYNNNNNYNKKLYYNINY 350
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 23.4 bits (48), Expect = 1.8
Identities = 10/30 (33%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = -1
Query: 201 NNLRINFVTK-SLLCSSHNDNKRLYFNLTY 115
++L N+++ S + +N NK+LY+N+ Y
Sbjct: 83 SSLSNNYISNISNYNNDNNYNKKLYYNINY 112
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 1.8
Identities = 7/15 (46%), Positives = 13/15 (86%)
Frame = -1
Query: 159 SSHNDNKRLYFNLTY 115
+++N NK+LY+N+ Y
Sbjct: 100 NNNNYNKKLYYNINY 114
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 1.8
Identities = 7/15 (46%), Positives = 13/15 (86%)
Frame = -1
Query: 159 SSHNDNKRLYFNLTY 115
+++N NK+LY+N+ Y
Sbjct: 100 NNNNYNKKLYYNINY 114
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 1.8
Identities = 7/15 (46%), Positives = 13/15 (86%)
Frame = -1
Query: 159 SSHNDNKRLYFNLTY 115
+++N NK+LY+N+ Y
Sbjct: 100 NNNNYNKKLYYNINY 114
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 1.8
Identities = 7/15 (46%), Positives = 13/15 (86%)
Frame = -1
Query: 159 SSHNDNKRLYFNLTY 115
+++N NK+LY+N+ Y
Sbjct: 100 NNNNYNKKLYYNINY 114
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.6 bits (46), Expect = 3.1
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -1
Query: 153 HNDNKRLYFNLTY 115
+N NK+LY+N+ Y
Sbjct: 102 NNYNKKLYYNINY 114
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = -1
Query: 201 NNLRINFVTKSLLCSSHNDNKRLYFNL 121
NN + N+ + +++N NK+LY+N+
Sbjct: 92 NNYKYNYNNNNY--NNNNYNKKLYYNI 116
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = -1
Query: 201 NNLRINFVTKSLLCSSHNDNKRLYFNL 121
NN + N+ + +++N NK+LY+N+
Sbjct: 92 NNYKYNYNNNNY--NNNNYNKKLYYNI 116
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.2 bits (45), Expect = 4.1
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = -1
Query: 204 YNNLRINFVTKSLLCSSHNDNKRLYFNL 121
YNN N + +++N+ K+LY+N+
Sbjct: 329 YNNNNYNNNYNNYNNNNYNNYKKLYYNI 356
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.8 bits (44), Expect = 5.4
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = -1
Query: 210 YTYNNLRINFVTKSLLCSSHNDNKRLYFNL 121
Y YN N+ + + +N+ K+LY+N+
Sbjct: 329 YKYNYNNNNYNNNNYNNNYNNNCKKLYYNI 358
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.4 bits (43), Expect = 7.2
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -1
Query: 147 DNKRLYFNLTY 115
+NK+LY+N+ Y
Sbjct: 322 NNKKLYYNINY 332
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,349
Number of Sequences: 438
Number of extensions: 2785
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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