Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31949
         (677 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    24   1.5  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    24   1.5  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   3.5  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   8.2  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   8.2  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   8.2  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   8.2  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   8.2  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/23 (39%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = -3

Query: 657 HRCPSEVHQL-EVVFWRRHVPYF 592
           H C +   QL ++V W +H+P+F
Sbjct: 233 HICNATNKQLFQLVAWAKHIPHF 255


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/23 (39%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = -3

Query: 657 HRCPSEVHQL-EVVFWRRHVPYF 592
           H C +   QL ++V W +H+P+F
Sbjct: 233 HICNATNKQLFQLVAWAKHIPHF 255


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 16/67 (23%), Positives = 26/67 (38%)
 Frame = -1

Query: 566 ISHAKGCHQTIEISRCVTAYIVFKDFTINCCVCLFDAVDLIVGHSAHYFDEDAFVGTDPD 387
           + H  G     E     T   +   FT +     +  V  + G +  ++++DA V   PD
Sbjct: 181 VQHQSGSEAEAEFVCIATPEAIELHFTTDHPSVAYLLVGSLKGIARQFYNDDANVYILPD 240

Query: 386 HGLVKFF 366
               KFF
Sbjct: 241 PYNTKFF 247


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +3

Query: 396 GTDEGVLIEVMCTMSNYEIHSIKQAYTAIYGKILEDD 506
           G  EG+  ++   +S+ +  + K     +YGK+  DD
Sbjct: 611 GKPEGMRYKMFFFLSSMDESNTKSYEIPLYGKMTLDD 647


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +3

Query: 396 GTDEGVLIEVMCTMSNYEIHSIKQAYTAIYGKILEDD 506
           G  EG+  ++   +S+ +  + K     +YGK+  DD
Sbjct: 611 GKPEGMRYKMFFFLSSMDESNTKSYEIPLYGKMTLDD 647


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 331 IKRSSNFPLVSLLISDI 281
           ++R  N+ LVSL +SD+
Sbjct: 72  LRRPCNYLLVSLAVSDL 88


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 602 CPILIDREIFRSISH 558
           CP  +D  I+ +ISH
Sbjct: 562 CPYTVDAAIYGNISH 576


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +1

Query: 334 RC*LHCRSSTLKNFTRPWSGSVPTK 408
           RC + C +++   +   W  S+PTK
Sbjct: 18  RCSVRCSAASGLRWFEIWRDSLPTK 42


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,734
Number of Sequences: 438
Number of extensions: 4367
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)