Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31942
         (580 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    24   0.94 
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    23   2.9  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   2.9  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   5.0  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   5.0  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           22   5.0  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   5.0  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 465 NVNGLCEISVDRFC 506
           ++  LC ISVDRFC
Sbjct: 128 SILNLCMISVDRFC 141


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -1

Query: 397 QNRARNVQNDVND*TNRVHSS 335
           QN  +N QND N   N+VH S
Sbjct: 520 QNDNQNNQNDNNRNDNQVHHS 540


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 21  SEVSIHLSYISCPVRSLTYIH 83
           S ++I + YISCP  S+ + H
Sbjct: 180 SILAIKVYYISCPEISVNFAH 200


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -1

Query: 307 NELTERTCRRMSYAYVSRCYGDRS 236
           N L E+T  R  YA+V    G RS
Sbjct: 464 NFLPEKTANRHYYAFVPFSAGPRS 487


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 391 DFEILFVKTNYNISYGGFI*T 453
           D +++FV  NY +   GF+ T
Sbjct: 148 DSDVIFVTINYRLGILGFLST 168


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 391 DFEILFVKTNYNISYGGFI*T 453
           D +++FV  NY +   GF+ T
Sbjct: 19  DSDVIFVTINYRLGILGFLST 39


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 391 DFEILFVKTNYNISYGGFI*T 453
           D +++FV  NY +   GF+ T
Sbjct: 148 DSDVIFVTINYRLGILGFLST 168


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,865
Number of Sequences: 438
Number of extensions: 2681
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)