Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31938
         (457 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99273-3|CAB16478.1|  392|Caenorhabditis elegans Hypothetical pr...    28   3.7  
Z73906-8|CAA98120.3|  511|Caenorhabditis elegans Hypothetical pr...    27   4.9  
U53154-5|AAC25853.1|  347|Caenorhabditis elegans Hypothetical pr...    27   4.9  
AF016686-7|AAB66241.2|  664|Caenorhabditis elegans C-type lectin...    27   4.9  
AF038606-9|AAB92027.1|  152|Caenorhabditis elegans Hypothetical ...    27   6.5  
U41550-6|AAL06046.2|  135|Caenorhabditis elegans Hypothetical pr...    27   8.6  
AL032657-2|CAA21738.1|  368|Caenorhabditis elegans Hypothetical ...    27   8.6  

>Z99273-3|CAB16478.1|  392|Caenorhabditis elegans Hypothetical
           protein Y45F10C.3 protein.
          Length = 392

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -3

Query: 386 IRNSENTYKAIVLNKCLLHTS*YQCHNQGCNMFTIAPRILDY 261
           +RN+    +A +L  CLL TS    +NQ C    +   +++Y
Sbjct: 25  MRNNRTALRACILFNCLLGTSIRDAYNQFCR--AVGSDVMEY 64


>Z73906-8|CAA98120.3|  511|Caenorhabditis elegans Hypothetical
           protein D2030.8 protein.
          Length = 511

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = -1

Query: 286 QLLPGFWTTAWAASPLHSRR--LATKETTQILGVDCNT 179
           QLL G  TTAW  + L +R+  L TK  T I  + C T
Sbjct: 298 QLLLGHLTTAWHLTDLVNRKWPLTTKNQTNIELLHCAT 335


>U53154-5|AAC25853.1|  347|Caenorhabditis elegans Hypothetical
           protein C33G8.10 protein.
          Length = 347

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = -1

Query: 199 LGVDCNTAHT*LNNRPCRKCVATKYASSS*FK-KIYGETRHRNKLFCHSTRIHM 41
           L + C   H    + PCR C   K  ++   K K+ G +R +NK+   S   H+
Sbjct: 36  LDISCTCKHRLATSHPCRHCRMLKCMATGMVKCKVQG-SREKNKITTSSLPGHI 88


>AF016686-7|AAB66241.2|  664|Caenorhabditis elegans C-type lectin
           protein 44 protein.
          Length = 664

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 15/49 (30%), Positives = 22/49 (44%)
 Frame = -3

Query: 266 DYSLGSFSTTLPKTSDKRNNANPRCRL*HRAYVIKQSSMQEVRSYEVCL 120
           DYS  SF   +PK+S+      P   + H  Y +    + E  + E CL
Sbjct: 238 DYSTHSFFCEVPKSSNVSAAETPLILIFHFCYSVNTYLLSEPDAREFCL 286


>AF038606-9|AAB92027.1|  152|Caenorhabditis elegans Hypothetical
           protein C04C3.7 protein.
          Length = 152

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 12/49 (24%), Positives = 24/49 (48%)
 Frame = +3

Query: 291 HVAALIMTLVSTSVQ*TLVQHNGLVSVLTVPYLIV*AYSVMLVCKYLIY 437
           H+ +L    +  S   T ++ N   + L + ++    YS+M+ C Y +Y
Sbjct: 11  HIKSLFPANIPNSTD-TFIRWNNAFNTLNMTFVGTLQYSIMIFCGYKLY 58


>U41550-6|AAL06046.2|  135|Caenorhabditis elegans Hypothetical
           protein R04A9.6 protein.
          Length = 135

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -3

Query: 92  RNSPPKQTFLSQHKNTHARSPNEK 21
           R+S PKQT+  ++ + H R+ NE+
Sbjct: 71  RSSNPKQTYAVKNSSEHPRNKNEE 94


>AL032657-2|CAA21738.1|  368|Caenorhabditis elegans Hypothetical
           protein Y47H9C.2 protein.
          Length = 368

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +2

Query: 341 TCSTQWPCKCSHCSL-SNCLGLF 406
           TC    P +CSHC++  NC+ +F
Sbjct: 168 TCRLYRPPRCSHCAICDNCVLMF 190


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,325,403
Number of Sequences: 27780
Number of extensions: 210044
Number of successful extensions: 545
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 545
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)