Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31929
(334 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC777.09c |arg1||acetylornithine aminotransferase|Schizosaccha... 44 5e-06
SPBC21C3.08c |||ornithine aminotransferase|Schizosaccharomyces p... 40 1e-04
SPBC1773.03c |||aminotransferase class-III, unknown specificty|S... 33 0.015
SPAC1039.07c |||4-aminobutyrate aminotransferase |Schizosaccharo... 28 0.43
SPAC6B12.04c |||aminotransferase class I and II|Schizosaccharomy... 27 0.57
SPCC417.11c |||glutamate-1-semialdehyde 2,1-aminomutaseaminotran... 27 0.75
SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28 |Schizo... 27 0.99
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 25 2.3
SPBC4B4.04 |||translation initiation factor eIF2A |Schizosacchar... 25 2.3
SPAC27F1.05c |||aminotransferase class-III, unknown specificty|S... 25 3.0
SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyce... 25 3.0
SPAC4G9.07 |mug133||S. pombe specific UPF0300 family protein 2|S... 25 3.0
SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces... 25 4.0
SPAC1B3.13 |||U3 snoRNP-associated protein Nan1|Schizosaccharomy... 25 4.0
SPAC2E1P3.02c |amt3||ammonium transporter Amt3|Schizosaccharomyc... 24 5.3
SPAC2F3.08 |sut1||alpha-glucoside transporter |Schizosaccharomyc... 24 5.3
SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces ... 23 9.2
SPBC1348.08c |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 23 9.2
SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual 23 9.2
SPAC977.07c |||glycoprotein |Schizosaccharomyces pombe|chr 1|||M... 23 9.2
>SPCC777.09c |arg1||acetylornithine
aminotransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 441
Score = 44.4 bits (100), Expect = 5e-06
Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +2
Query: 188 SITNAYKK-PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVCVGHCHPKV 328
+I + Y + PV+ +G +L+D +G++Y+D G+ +GH HP+V
Sbjct: 46 NIISVYARYPVVAAKGEGSYLFDKEGRKYIDFTSGVAVTSLGHAHPEV 93
>SPBC21C3.08c |||ornithine aminotransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 438
Score = 39.9 bits (89), Expect = 1e-04
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +2
Query: 143 SYQQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVCVGHCHP 322
S +Q+E ++ Y + N + PV ++ ++D +G+ YLD V GHCHP
Sbjct: 12 STEQIEVLENEY---AAHNYHPLPVCFSKAKGAKVWDPEGREYLDFLSAYSAVNQGHCHP 68
Query: 323 KV 328
K+
Sbjct: 69 KI 70
>SPBC1773.03c |||aminotransferase class-III, unknown
specificty|Schizosaccharomyces pombe|chr 2|||Manual
Length = 459
Score = 32.7 bits (71), Expect = 0.015
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 194 TNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVCVGHCHPKV 328
T+ +P + + +LY DG R +D GG C+GH + +V
Sbjct: 22 TSPNHRPPTVVRAEGVYLYLEDGTRIMDATGGAAVACLGHGNKEV 66
>SPAC1039.07c |||4-aminobutyrate aminotransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 27.9 bits (59), Expect = 0.43
Identities = 11/41 (26%), Positives = 19/41 (46%)
Frame = +2
Query: 212 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVCVGHCHPKVNA 334
P ++ + +YD LD G ++ +GH HP + A
Sbjct: 33 PKIIVRAKGCCVYDEQDNAILDFTSGQMSAILGHSHPDITA 73
>SPAC6B12.04c |||aminotransferase class I and II|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 421
Score = 27.5 bits (58), Expect = 0.57
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +2
Query: 38 EMANRGT--KLCFDIVRTYSTAKMPPTDF 118
E+ANR KLC+ I++ A +PPT+F
Sbjct: 355 EIANRPRDFKLCYWILKEIGVATIPPTEF 383
>SPCC417.11c |||glutamate-1-semialdehyde
2,1-aminomutaseaminotransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 435
Score = 27.1 bits (57), Expect = 0.75
Identities = 11/39 (28%), Positives = 17/39 (43%)
Frame = +2
Query: 212 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVCVGHCHPKV 328
P+ + G+ L D DG Y D + GH +P +
Sbjct: 52 PIFIEAGYGSKLRDVDGHEYTDFLNELTAGIYGHSNPVI 90
>SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1055
Score = 26.6 bits (56), Expect = 0.99
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 134 TGPSYQQVEQMKGVYMPPSITNAYKKPVLL 223
+G SY+ V+ + VY+ PS + A KKP ++
Sbjct: 977 SGDSYRTVKSNQTVYIHPSSSVAEKKPKVI 1006
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 25.4 bits (53), Expect = 2.3
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = -2
Query: 147 YEGPVYGLGTKSVGGILAVLYVLTMSKHNFVPLLAISMCFSVEAIAIC 4
+E P+ L K V + +L L ++ PL+ I+ EA+A C
Sbjct: 246 FENPLILLSEKKVSAVQDILPSLELAAQQRRPLVIIAEDVDGEALAAC 293
>SPBC4B4.04 |||translation initiation factor eIF2A
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 576
Score = 25.4 bits (53), Expect = 2.3
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 201 PIRSRCFSPRGTCSGYTTTT 260
P R+ C+SP G Y T T
Sbjct: 36 PARNACYSPNGKLFAYATAT 55
>SPAC27F1.05c |||aminotransferase class-III, unknown
specificty|Schizosaccharomyces pombe|chr 1|||Manual
Length = 484
Score = 25.0 bits (52), Expect = 3.0
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 251 DNDGKRYLDLFGGIVTVCVGH 313
D G +LDL GG+ V VG+
Sbjct: 85 DEKGTEHLDLIGGVGVVTVGN 105
>SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 25.0 bits (52), Expect = 3.0
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +2
Query: 113 DFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKP 214
D P P PS Q + MPP +T Y +P
Sbjct: 454 DGSPDPPAAPSIQNSLSVHESEMPPHVTRDYTQP 487
>SPAC4G9.07 |mug133||S. pombe specific UPF0300 family protein
2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 513
Score = 25.0 bits (52), Expect = 3.0
Identities = 8/34 (23%), Positives = 16/34 (47%)
Frame = -2
Query: 330 FTFG*QWPTQTVTIPPNRSRYLLPSLSYNHCMCP 229
+T+ +W + + P Y++ YN +CP
Sbjct: 108 YTYNSRWKIEIPSYPVREIPYVVADTPYNKLLCP 141
>SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3131
Score = 24.6 bits (51), Expect = 4.0
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 303 QTVTIPPNRSRYLLPSLSYNHCMCPWVRS 217
Q + PN RY +PS SY++ + P+ S
Sbjct: 2103 QVTSSSPNSIRYTIPSGSYSNDIKPYFYS 2131
>SPAC1B3.13 |||U3 snoRNP-associated protein Nan1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 800
Score = 24.6 bits (51), Expect = 4.0
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -3
Query: 158 LLVGTKVPCTVWARNPSAAFWPC 90
+ VGT +WA P ++ W C
Sbjct: 511 ITVGTDATLRIWALLPGSSAWKC 533
>SPAC2E1P3.02c |amt3||ammonium transporter Amt3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 517
Score = 24.2 bits (50), Expect = 5.3
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -2
Query: 264 LPSLSYNHCMCPWVRSTGF 208
LPS S N+C W R GF
Sbjct: 230 LPSSSQNNCKANWKRWFGF 248
>SPAC2F3.08 |sut1||alpha-glucoside transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 553
Score = 24.2 bits (50), Expect = 5.3
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = -2
Query: 294 TIPPNRSRYLLP-SLSYNHCMCPWVRSTGFL*AFVIEGGM*TPFICSTCWYEGPVYGLGT 118
+IP S YL+ ++S W G+ ++ G+ + S W GP+ G+
Sbjct: 27 SIPSRSSLYLIALTVSLLGVQLTWSVELGYGTPYLFSLGLRKEWT-SIIWIAGPLTGILI 85
Query: 117 KSVGGILA 94
+ + GIL+
Sbjct: 86 QPIAGILS 93
>SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1429
Score = 23.4 bits (48), Expect = 9.2
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 183 RLQSRTPIRSRCFSP 227
R RTPIRS FSP
Sbjct: 518 REHGRTPIRSNTFSP 532
>SPBC1348.08c |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 416
Score = 23.4 bits (48), Expect = 9.2
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -2
Query: 192 IEGGM*TPFICSTCWYEGPVYGLGTKSVG 106
I G F + W+E P GLGT +G
Sbjct: 315 ISGWSNNNFDAYSYWHESPNMGLGTVGMG 343
>SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1496
Score = 23.4 bits (48), Expect = 9.2
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +2
Query: 173 VYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIV 295
V+ P S N+ K + Q DN+G Y D F +V
Sbjct: 255 VWQPRSQKNSEKGSSIYPQNSFNASIDNEGGPYEDFFKVVV 295
>SPAC977.07c |||glycoprotein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 416
Score = 23.4 bits (48), Expect = 9.2
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -2
Query: 192 IEGGM*TPFICSTCWYEGPVYGLGTKSVG 106
I G F + W+E P GLGT +G
Sbjct: 315 ISGWSNNNFDAYSYWHESPNMGLGTVGMG 343
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,545,316
Number of Sequences: 5004
Number of extensions: 30800
Number of successful extensions: 100
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 100
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 93942212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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