Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31929
         (334 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97405-5|AAB53010.3|  444|Caenorhabditis elegans Hypothetical pr...    76   5e-15
U41534-14|AAV34796.1|  226|Caenorhabditis elegans Hypothetical p...    41   2e-04
U41534-13|AAD31050.2|  422|Caenorhabditis elegans Hypothetical p...    41   2e-04
U41534-12|AAM22027.1|  357|Caenorhabditis elegans Hypothetical p...    41   2e-04
U80931-3|AAO91701.1|  160|Caenorhabditis elegans Hypothetical pr...    40   4e-04
U80931-2|AAB37999.1|  467|Caenorhabditis elegans Hypothetical pr...    40   4e-04
Z80215-14|CAI79138.1|  662|Caenorhabditis elegans Hypothetical p...    30   0.46 
Z80215-13|CAI79137.1|  640|Caenorhabditis elegans Hypothetical p...    30   0.46 
Z80215-12|CAB02277.1|  652|Caenorhabditis elegans Hypothetical p...    30   0.46 
U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical pr...    29   1.1  
U39644-1|AAA80359.2|  393|Caenorhabditis elegans Hypothetical pr...    28   1.9  
Z75539-1|CAA99843.1|  672|Caenorhabditis elegans Hypothetical pr...    27   2.5  
CU457741-1|CAM36342.1|  347|Caenorhabditis elegans Hypothetical ...    27   2.5  
AL032625-4|CAB63350.2|  792|Caenorhabditis elegans Hypothetical ...    26   7.5  
AF016449-3|AAG23997.2|  337|Caenorhabditis elegans Serpentine re...    26   7.5  
Z75552-9|CAA99945.2|  705|Caenorhabditis elegans Hypothetical pr...    25   10.0 
Z75551-6|CAA99937.2|  705|Caenorhabditis elegans Hypothetical pr...    25   10.0 
U64846-8|AAG24109.1|  331|Caenorhabditis elegans Serpentine rece...    25   10.0 
U64846-6|AAG24115.3|  336|Caenorhabditis elegans Serpentine rece...    25   10.0 
AC006605-7|AAK85440.1|  107|Caenorhabditis elegans Hypothetical ...    25   10.0 

>U97405-5|AAB53010.3|  444|Caenorhabditis elegans Hypothetical
           protein T09B4.8 protein.
          Length = 444

 Score = 76.2 bits (179), Expect = 5e-15
 Identities = 32/62 (51%), Positives = 47/62 (75%)
 Frame = +2

Query: 149 QQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVCVGHCHPKV 328
           Q+V+ ++ + +P      YK  +L+T+G  Q+L+D++GK+YLD FGGIVTV VGHCHPK+
Sbjct: 2   QRVQALRPL-LPKGHVTYYKDQLLITKGEKQFLFDSNGKKYLDFFGGIVTVSVGHCHPKI 60

Query: 329 NA 334
           NA
Sbjct: 61  NA 62


>U41534-14|AAV34796.1|  226|Caenorhabditis elegans Hypothetical
           protein C16A3.10c protein.
          Length = 226

 Score = 40.7 bits (91), Expect = 2e-04
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = +2

Query: 212 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVCVGHCHPKV 328
           PV L++G   +++D +GK+Y D       V  GHCHPK+
Sbjct: 40  PVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPKL 78


>U41534-13|AAD31050.2|  422|Caenorhabditis elegans Hypothetical
           protein C16A3.10a protein.
          Length = 422

 Score = 40.7 bits (91), Expect = 2e-04
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = +2

Query: 212 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVCVGHCHPKV 328
           PV L++G   +++D +GK+Y D       V  GHCHPK+
Sbjct: 40  PVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPKL 78


>U41534-12|AAM22027.1|  357|Caenorhabditis elegans Hypothetical
           protein C16A3.10b protein.
          Length = 357

 Score = 40.7 bits (91), Expect = 2e-04
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = +2

Query: 212 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVCVGHCHPKV 328
           PV L++G   +++D +GK+Y D       V  GHCHPK+
Sbjct: 40  PVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPKL 78


>U80931-3|AAO91701.1|  160|Caenorhabditis elegans Hypothetical
           protein T01B11.2b protein.
          Length = 160

 Score = 39.9 bits (89), Expect = 4e-04
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = +2

Query: 212 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVCVGHCHPKV 328
           P ++++  MQ+LYD    ++LD    +    VGHCHPKV
Sbjct: 50  PFMVSRASMQYLYDEKSNKFLDCISNVQH--VGHCHPKV 86


>U80931-2|AAB37999.1|  467|Caenorhabditis elegans Hypothetical
           protein T01B11.2a protein.
          Length = 467

 Score = 39.9 bits (89), Expect = 4e-04
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = +2

Query: 212 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVCVGHCHPKV 328
           P ++++  MQ+LYD    ++LD    +    VGHCHPKV
Sbjct: 50  PFMVSRASMQYLYDEKSNKFLDCISNVQH--VGHCHPKV 86


>Z80215-14|CAI79138.1|  662|Caenorhabditis elegans Hypothetical
           protein C36B1.12c protein.
          Length = 662

 Score = 29.9 bits (64), Expect = 0.46
 Identities = 10/19 (52%), Positives = 16/19 (84%)
 Frame = +2

Query: 251 DNDGKRYLDLFGGIVTVCV 307
           D++ K +LD FGGI+T+C+
Sbjct: 279 DSETKGFLDRFGGIITICL 297


>Z80215-13|CAI79137.1|  640|Caenorhabditis elegans Hypothetical
           protein C36B1.12b protein.
          Length = 640

 Score = 29.9 bits (64), Expect = 0.46
 Identities = 10/19 (52%), Positives = 16/19 (84%)
 Frame = +2

Query: 251 DNDGKRYLDLFGGIVTVCV 307
           D++ K +LD FGGI+T+C+
Sbjct: 279 DSETKGFLDRFGGIITICL 297


>Z80215-12|CAB02277.1|  652|Caenorhabditis elegans Hypothetical
           protein C36B1.12a protein.
          Length = 652

 Score = 29.9 bits (64), Expect = 0.46
 Identities = 10/19 (52%), Positives = 16/19 (84%)
 Frame = +2

Query: 251 DNDGKRYLDLFGGIVTVCV 307
           D++ K +LD FGGI+T+C+
Sbjct: 279 DSETKGFLDRFGGIITICL 297


>U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical
           protein K07E3.1 protein.
          Length = 1061

 Score = 28.7 bits (61), Expect = 1.1
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +2

Query: 98  KMPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKP 214
           K+ P  + P+   G  YQQ++Q      PP + NAY+ P
Sbjct: 204 KVHPMPYHPQMNKGNHYQQLQQYT---QPPPVYNAYQPP 239


>U39644-1|AAA80359.2|  393|Caenorhabditis elegans Hypothetical
           protein T10E10.3 protein.
          Length = 393

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -1

Query: 172 SFHLFYLLVRRSRVRSGHEIRRRHFGRAVRSDDVEA*FCSSIS 44
           SFH   L   R+R R     R R    + RSDDV A   S+++
Sbjct: 197 SFHTCLLYYLRNRFRHFFPARTRSARNSTRSDDVPAPLLSNVT 239


>Z75539-1|CAA99843.1|  672|Caenorhabditis elegans Hypothetical
           protein F28C1.1 protein.
          Length = 672

 Score = 27.5 bits (58), Expect = 2.5
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +3

Query: 21  QQRNTSKWLIEEQNYASTSSERTARPKCRRRISCPDRTRDLRTNK 155
           ++R  S+     ++ + ++S R  R K RRR    DR+RD R  K
Sbjct: 460 RERRRSRSRDRRRHRSRSTSRRRQRSKDRRRDRSRDRSRDERNEK 504


>CU457741-1|CAM36342.1|  347|Caenorhabditis elegans Hypothetical
           protein C42C1.1 protein.
          Length = 347

 Score = 27.5 bits (58), Expect = 2.5
 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -2

Query: 150 WYEGPVYGLGTKSVGGILAV-LYVLTMSKHNFVPLLAIS 37
           W+ G + G+G  + GG+LA  L ++  S ++ V LL +S
Sbjct: 135 WWIGIIIGIGLYTAGGLLAYSLAIVATSFYHTVFLLVLS 173


>AL032625-4|CAB63350.2|  792|Caenorhabditis elegans Hypothetical
           protein Y37H9A.3 protein.
          Length = 792

 Score = 25.8 bits (54), Expect = 7.5
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = -1

Query: 181 HVNSFHLFYLLVRRSRVRSGHEIRRRHFGRAV 86
           H+   H++Y+   +S  ++G   + R + RAV
Sbjct: 138 HLKQLHVYYMKAHKSAEQAGEGPKARRYKRAV 169


>AF016449-3|AAG23997.2|  337|Caenorhabditis elegans Serpentine
           receptor, class t protein15 protein.
          Length = 337

 Score = 25.8 bits (54), Expect = 7.5
 Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = +2

Query: 203 YKKPVLLTQGHMQWLYD-NDGK 265
           + KPV+   G+M W++D N GK
Sbjct: 184 FTKPVIYNTGYMTWVFDPNIGK 205


>Z75552-9|CAA99945.2|  705|Caenorhabditis elegans Hypothetical
           protein W04D2.6a protein.
          Length = 705

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 16/64 (25%), Positives = 30/64 (46%)
 Frame = +3

Query: 24  QRNTSKWLIEEQNYASTSSERTARPKCRRRISCPDRTRDLRTNK*NK*KEFTCRLQSRTP 203
           +R+ S+    E+    + S+ + R K  RR      +     +  ++   ++ R +SRTP
Sbjct: 226 RRSRSRTRSRERTSRRSRSKESPRSKRSRRSRSSSNSSSESDSSSSRSSSYSSRSRSRTP 285

Query: 204 IRSR 215
            RSR
Sbjct: 286 QRSR 289


>Z75551-6|CAA99937.2|  705|Caenorhabditis elegans Hypothetical
           protein W04D2.6a protein.
          Length = 705

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 16/64 (25%), Positives = 30/64 (46%)
 Frame = +3

Query: 24  QRNTSKWLIEEQNYASTSSERTARPKCRRRISCPDRTRDLRTNK*NK*KEFTCRLQSRTP 203
           +R+ S+    E+    + S+ + R K  RR      +     +  ++   ++ R +SRTP
Sbjct: 226 RRSRSRTRSRERTSRRSRSKESPRSKRSRRSRSSSNSSSESDSSSSRSSSYSSRSRSRTP 285

Query: 204 IRSR 215
            RSR
Sbjct: 286 QRSR 289


>U64846-8|AAG24109.1|  331|Caenorhabditis elegans Serpentine
           receptor, class t protein19 protein.
          Length = 331

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 209 KPVLLTQGHMQWLYD 253
           KPV+ T  HM W +D
Sbjct: 181 KPVIFTPTHMSWFFD 195


>U64846-6|AAG24115.3|  336|Caenorhabditis elegans Serpentine
           receptor, class t protein20 protein.
          Length = 336

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 209 KPVLLTQGHMQWLYD 253
           KPV+ T  HM W +D
Sbjct: 181 KPVIFTPTHMSWFFD 195


>AC006605-7|AAK85440.1|  107|Caenorhabditis elegans Hypothetical
           protein C07H6.2 protein.
          Length = 107

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -2

Query: 306 TQTVTIPPNRSRYLLPSLSYN 244
           T TVT+PP+R + L+  LS N
Sbjct: 14  TSTVTVPPSREQNLVLHLSPN 34


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,967,644
Number of Sequences: 27780
Number of extensions: 196082
Number of successful extensions: 672
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 670
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 408121444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)