Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31918
(690 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 317 8e-88
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 317 8e-88
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 147 1e-36
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 116 2e-27
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 65 8e-12
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 50 4e-07
SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase YakC|Schizo... 30 0.27
SPAC22H12.02 |tfg3|taf14|transcription factor TFIIF complex subu... 29 0.63
SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual 29 0.63
SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|c... 29 0.63
SPBC1289.08 |||UDP-N-acetylglucosamine diphosphorylase |Schizosa... 29 0.84
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 28 1.1
SPAC21E11.06 |tif224||translation initiation factor eIF2B delta ... 28 1.5
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 27 1.9
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 2.6
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 27 3.4
SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces po... 27 3.4
SPBC32F12.09 |rum1||CDK inhibitor Rum1|Schizosaccharomyces pombe... 27 3.4
SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3 |Schiz... 26 4.5
SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr 2|... 26 4.5
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 26 4.5
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 26 5.9
SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccha... 25 7.8
SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|c... 25 7.8
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 317 bits (779), Expect = 8e-88
Identities = 152/235 (64%), Positives = 182/235 (77%), Gaps = 5/235 (2%)
Frame = +1
Query: 1 VEAIEDVPSGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADL 180
+E IED P+GNI GLVGVDQFLVK+GT+TT + AHNMKVMKFSVSPVV+VAVE KN DL
Sbjct: 442 IEPIEDCPAGNIIGLVGVDQFLVKSGTLTTSEVAHNMKVMKFSVSPVVQVAVEVKNGNDL 501
Query: 181 PKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVV 360
PKLVEGLKRL+KSDP V C ESGEHIVAGAGELHLEICLKDL+EDHA IP+K S PVV
Sbjct: 502 PKLVEGLKRLSKSDPCVLCTTSESGEHIVAGAGELHLEICLKDLQEDHAGIPLKISPPVV 561
Query: 361 SYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTE 540
SYRE+V+E S LSKSPNKHNR+FM A+PM + L I+ G VNPRDDFK RAR + +
Sbjct: 562 SYRESVSEPSSMTALSKSPNKHNRIFMTAEPMSEELSVAIETGHVNPRDDFKVRARIMAD 621
Query: 541 KYEYDVTEARKIWCFGPEGTGPNILVDCSKEFSTSMKLR-----TLLWLDSSGPL 690
++ +DVT+ARKIWCFGP+ TG N++VD +K + +++ W GP+
Sbjct: 622 EFGWDVTDARKIWCFGPDTTGANVVVDQTKAVAYLNEIKDSVVAAFAWASKEGPM 676
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 317 bits (779), Expect = 8e-88
Identities = 152/235 (64%), Positives = 182/235 (77%), Gaps = 5/235 (2%)
Frame = +1
Query: 1 VEAIEDVPSGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADL 180
+E IED P+GNI GLVGVDQFLVK+GT+TT + AHNMKVMKFSVSPVV+VAVE KN DL
Sbjct: 442 IEPIEDCPAGNIIGLVGVDQFLVKSGTLTTSEVAHNMKVMKFSVSPVVQVAVEVKNGNDL 501
Query: 181 PKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVV 360
PKLVEGLKRL+KSDP V C ESGEHIVAGAGELHLEICLKDL+EDHA IP+K S PVV
Sbjct: 502 PKLVEGLKRLSKSDPCVLCTTSESGEHIVAGAGELHLEICLKDLQEDHAGIPLKISPPVV 561
Query: 361 SYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTE 540
SYRE+V+E S LSKSPNKHNR+FM A+PM + L I+ G VNPRDDFK RAR + +
Sbjct: 562 SYRESVSEPSSMTALSKSPNKHNRIFMTAEPMSEELSVAIETGHVNPRDDFKVRARIMAD 621
Query: 541 KYEYDVTEARKIWCFGPEGTGPNILVDCSKEFSTSMKLR-----TLLWLDSSGPL 690
++ +DVT+ARKIWCFGP+ TG N++VD +K + +++ W GP+
Sbjct: 622 EFGWDVTDARKIWCFGPDTTGANVVVDQTKAVAYLNEIKDSVVAAFAWASKEGPM 676
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 147 bits (357), Expect = 1e-36
Identities = 76/207 (36%), Positives = 119/207 (57%), Gaps = 3/207 (1%)
Frame = +1
Query: 10 IEDVPSGNICGLVGVDQFLVKTGTITTFK---NAHNMKVMKFSVSPVVRVAVEPKNPADL 180
++ +G + L GVD + KT TI + + + + + V +VAVEP NP++L
Sbjct: 554 VDGAVAGMLVLLGGVDNSISKTATIVSDNLKDDPYIFRPIAHMSESVFKVAVEPHNPSEL 613
Query: 181 PKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVV 360
PKL++GL++ KS P+ EESGEH + G GE++++ L DL ++ I I+ SDPV
Sbjct: 614 PKLLDGLRKTNKSYPLSITKVEESGEHTIFGTGEMYMDCLLYDLRTLYSEIEIRVSDPVA 673
Query: 361 SYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTE 540
+ ET + S C S +PNK NR+ M +P+ G+ DI+ G+VN K + + +
Sbjct: 674 RFCETAVDTSSIKCFSDTPNKKNRITMVVEPLEKGISNDIENGKVNINWPQKRISEFFQK 733
Query: 541 KYEYDVTEARKIWCFGPEGTGPNILVD 621
Y++D+ +R IW FGP+ G NIL D
Sbjct: 734 NYDWDLLASRSIWAFGPDDRGTNILRD 760
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 116 bits (280), Expect = 2e-27
Identities = 58/134 (43%), Positives = 84/134 (62%)
Frame = +1
Query: 10 IEDVPSGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKL 189
+E VP+GN+ + G+ +++T T+ + N N+ + + P+VRVA+EP P ++ KL
Sbjct: 520 LETVPAGNVFAIGGLAGTVLRTATLCSSPNGPNLVGVTQQMEPIVRVALEPVRPFEMNKL 579
Query: 190 VEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYR 369
V GL L ++DP VQ EE+GEH++ AGE+HLE CLKDL E A I I+ S P+V YR
Sbjct: 580 VTGLDMLNQADPCVQIAVEENGEHVIMCAGEIHLERCLKDLRERFAKIEIQASQPLVPYR 639
Query: 370 ETVAEESDQLCLSK 411
ET D L +K
Sbjct: 640 ETTIATPDLLAKNK 653
Score = 27.9 bits (59), Expect = 1.5
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +1
Query: 505 DDFKTRARYLTEKYEYDVTEARK----IWCFGPEGTGPNILVDCSKE 633
+ F R L E+ D+ E + I FGP+ GPNIL D +K+
Sbjct: 724 EKFYERLSKLLEEENSDLGELKNHLDSIIAFGPKRVGPNILFDKTKK 770
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 65.3 bits (152), Expect = 8e-12
Identities = 39/130 (30%), Positives = 72/130 (55%), Gaps = 1/130 (0%)
Frame = +1
Query: 1 VEAIEDVPSGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADL 180
+E IE V +G IC L G++ T T ++ M M F PV+ ++++PK+ D
Sbjct: 432 MEEIEKVEAGGICALFGIE--CASGDTFTDGSVSYTMTSM-FVPEPVISLSLKPKSK-DT 487
Query: 181 PKLVEGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPV 357
+ L R + DP + ++ ES E I++G GELHLE+ ++ + ++ + + P
Sbjct: 488 TSFSKALNRFQREDPTFRVQLDNESKETIISGMGELHLEVYVERMRREYK-VDCETGKPR 546
Query: 358 VSYRETVAEE 387
V++RET++++
Sbjct: 547 VAFRETLSKK 556
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 49.6 bits (113), Expect = 4e-07
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 9/151 (5%)
Frame = +1
Query: 4 EAIEDVPSGNICGLVGVDQFLVKTGTIT----TFKNAHNMKVMKFSV----SPVVRVAVE 159
+ ++ + +GNI + G+ QF TG I KN H SV PV ++E
Sbjct: 393 QEVDCISAGNIGVISGIKQF--HTGDIIINKENSKNFHEYLSGNQSVISIPEPVCIASIE 450
Query: 160 PKNPADLPKLVEGLKRLAKSDPMVQCINE-ESGEHIVAGAGELHLEICLKDLEEDHACIP 336
P + D P L+E L + + DP + + E+G+ ++ G G +HL++ + L +
Sbjct: 451 PYSLKDEPALLEALANMNREDPSFRYTQDLENGQLLIQGMGIMHLQVSYERLVSEFGA-R 509
Query: 337 IKKSDPVVSYRETVAEESDQLCLSKSPNKHN 429
V YRET+ + S + NK N
Sbjct: 510 ASLGKVQVGYRETLIDVSFNSVTLSTENKEN 540
>SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase
YakC|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 30.3 bits (65), Expect = 0.27
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +1
Query: 301 LKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMP 459
+K LEE+ + +K SD V + ++ + P +++FM PMP
Sbjct: 287 VKYLEENFGALKVKLSDATVKEIREACDNAEVIGARYPPGAGSKIFMDTPPMP 339
>SPAC22H12.02 |tfg3|taf14|transcription factor TFIIF complex subunit
Tfg3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 241
Score = 29.1 bits (62), Expect = 0.63
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 6/49 (12%)
Frame = +1
Query: 169 PADLPKLVEGLKRLAKSD--PMVQCINEESGEHIVA----GAGELHLEI 297
P D+ KL EGL++L + D +VQ +NE + GE H+++
Sbjct: 172 PVDMDKLAEGLQKLQEDDLLQVVQMVNENKTPDMYVRNDIEGGEFHIDL 220
>SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 973
Score = 29.1 bits (62), Expect = 0.63
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = -2
Query: 386 SSATVSRYDTTGSDFLIGMQAWSSSRSLRQISRWSSPAPATMCSPDSSLIHCTMGS 219
S T YDTTG+D ++ SS R WS+ P +P ++ I+ T GS
Sbjct: 117 SDYTSVYYDTTGTDDVVYEYHPSSERHKSTNDTWSTNLPT---NPTTTAIYSTSGS 169
>SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 871
Score = 29.1 bits (62), Expect = 0.63
Identities = 22/76 (28%), Positives = 37/76 (48%)
Frame = +1
Query: 241 NEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPN 420
+EE+ + A E C++DL++ + K+SD Y T+ ++KS
Sbjct: 198 DEETLHELFPNASEF---TCVRDLKKLEKKVK-KRSDLGNKYESTLNS-----LINKSVK 248
Query: 421 KHNRLFMKAQPMPDGL 468
KHN+L K +P+P L
Sbjct: 249 KHNKLVKKHKPLPSTL 264
>SPBC1289.08 |||UDP-N-acetylglucosamine diphosphorylase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 475
Score = 28.7 bits (61), Expect = 0.84
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = -2
Query: 686 GPLESSHNR--VLNFIEVLNSFEQSTRMLGPVPSGPKHQILRASVTSYSYFS 537
G L SSHN V+ + E+ + ++T + G KH +LRA+ +Y YFS
Sbjct: 288 GLLVSSHNHPCVVEYSEISDEACKATENV----DGHKHLLLRAANIAYHYFS 335
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 28.3 bits (60), Expect = 1.1
Identities = 28/147 (19%), Positives = 59/147 (40%), Gaps = 8/147 (5%)
Frame = +1
Query: 220 DPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQL 399
D ++ I E+ ++ + L E ++ + E I + + + +++ D
Sbjct: 413 DVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDEDEIDAEVLDSLGVTMDNF 472
Query: 400 CLSKSPNKHNRLFMKAQPMPDGLPEDI---DEGRVNPRDDFKTRARYLTEKYEYDVTEAR 570
+ + + L +P+ EDI +E + R+ + Y + + VT ++
Sbjct: 473 RFALGSSNPSALRETVVEVPNVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSK 532
Query: 571 KIWCFGPEGTGPNILV-----DCSKEF 636
+ FGP GTG +L +CS F
Sbjct: 533 GVLFFGPPGTGKTLLAKAIANECSANF 559
>SPAC21E11.06 |tif224||translation initiation factor eIF2B delta
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 27.9 bits (59), Expect = 1.5
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +1
Query: 46 VGVDQFLVKTGTITTFKNAHNMKV--MKFSVSP 138
+GVD F K G + +K+ N+K+ +K+ V+P
Sbjct: 404 MGVDDFEEKPGVLANWKSVKNLKLLSLKYDVTP 436
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 27.5 bits (58), Expect = 1.9
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 292 EICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNK 423
E+C +LE+D I +S +S + A++ DQL S + +K
Sbjct: 64 ELCNFELEKDSLESMIHESSTALSAQSNTAQDGDQLASSSTISK 107
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 27.1 bits (57), Expect = 2.6
Identities = 26/116 (22%), Positives = 44/116 (37%)
Frame = -2
Query: 407 ERQSWSDSSATVSRYDTTGSDFLIGMQAWSSSRSLRQISRWSSPAPATMCSPDSSLIHCT 228
++ S S +S T S T S + SSS +L S + ++ SSL H +
Sbjct: 89 QQSSSSSASLTSSSSATLTSSSSASPTSSSSSHALSSSSSSLVASSSSSGMSSSSLSHSS 148
Query: 227 MGSDLARRLRPSTSLGRSAGFLGSTATRTTGDTLNFITFMLWAFLKVVIVPVLTKN 60
+ S+ S + T D + IT + +++ V+ P T N
Sbjct: 149 SVPSSSSSYHSSSMTTSGLSSSASIVSSTYRDGPSIITLVSTSYVSEVVTPTTTNN 204
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 26.6 bits (56), Expect = 3.4
Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Frame = +1
Query: 286 HLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDG 465
HL++CL D +E+ + K + E S +L LSK + + + M
Sbjct: 475 HLKLCLSDSQEELLQLNAKLEKANIVIDEL---NSAKLKLSKQVEEESSMKDDLTEMNQR 531
Query: 466 LPEDID--EGRVNPRDDFKTRARYLTEKYEYD 555
L E I+ E VN +T + T K +Y+
Sbjct: 532 LKEQIESYENEVNSEITSRTLKEFETLKTQYE 563
>SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 793
Score = 26.6 bits (56), Expect = 3.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 55 DQFLVKTGTITTFKNAHNMKVMKFSVSPVV 144
D FLVK G + ++ +N+ FSVS +V
Sbjct: 82 DTFLVKYGDLINIQDPYNLNKTLFSVSDLV 111
>SPBC32F12.09 |rum1||CDK inhibitor Rum1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 230
Score = 26.6 bits (56), Expect = 3.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 594 LGAKAPNLTGFGNIVFVLFCKIPSAS 517
+G PNL GN +F L ++PS+S
Sbjct: 169 IGILPPNLNSIGNKMFSLKSRVPSSS 194
>SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1253
Score = 26.2 bits (55), Expect = 4.5
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 466 LPEDIDEGRVNPRDDFKT 519
LPE IDEG+++ DD KT
Sbjct: 194 LPEKIDEGKLSDVDDGKT 211
>SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 612
Score = 26.2 bits (55), Expect = 4.5
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Frame = -1
Query: 669 PQQSP*FH*GTEL----L*AIDQDVGAGTLGAKAPNLTGFGNIVFVLFCKIPSASLEVIA 502
P +P F GTE + +D+D ++G P+LT +G+ VL +P A+ + +
Sbjct: 297 PGSTPSFASGTENGVINVWRLDEDSNDNSMGIIKPHLTFYGHEGPVLCVCVPKATHHIFS 356
Query: 501 G 499
G
Sbjct: 357 G 357
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 26.2 bits (55), Expect = 4.5
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = -1
Query: 468 QTIRHGLSLHEQTVVLVGRL*E 403
+++RH +SL+E+T + +GRL E
Sbjct: 324 ESVRHLISLNEETWIQIGRLAE 345
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 25.8 bits (54), Expect = 5.9
Identities = 26/122 (21%), Positives = 46/122 (37%)
Frame = -2
Query: 392 SDSSATVSRYDTTGSDFLIGMQAWSSSRSLRQISRWSSPAPATMCSPDSSLIHCTMGSDL 213
+ +SAT S ++ + A SSS S S ++ + S +S+ S +
Sbjct: 186 ASNSATSSSLASSSLNSTTSATATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSI 245
Query: 212 ARRLRPSTSLGRSAGFLGSTATRTTGDTLNFITFMLWAFLKVVIVPVLTKN*STPTRPQM 33
+ + ST L S +T+ T + + T L P+ + N +T T
Sbjct: 246 SSTVSSSTPLTSSNSTTAATSASATSSSAQYNTSSLLPSSTPSSTPLSSANSTTATSASS 305
Query: 32 LP 27
P
Sbjct: 306 TP 307
>SPAC23E2.03c |ste7||meiotic suppressor protein
Ste7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 25.4 bits (53), Expect = 7.8
Identities = 10/33 (30%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = -2
Query: 284 SSPAPATMCSPDSSL--IHCTMGSDLARRLRPS 192
S+ +P+T+CSPD+++ ++ G L ++ P+
Sbjct: 403 SNVSPSTICSPDNNVTFVNLAPGEKLTFKIEPN 435
>SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 240
Score = 25.4 bits (53), Expect = 7.8
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +1
Query: 163 KNPADLPKLVEGLKRLAKSDPMVQC-INEES--GEHIVAGAGELHLEICLKDLEEDHACI 333
K P +P L KR KS QC I +E + G G+L+ + + + D + +
Sbjct: 16 KEPGKVPPLDIDFKRSVKSSQFSQCAITDEPLYPPIVSCGLGKLYNKASILQMLLDRSSV 75
Query: 334 PIKKSDPVVSYRETV 378
P K + S ++ V
Sbjct: 76 P-KSPSHIKSLKDVV 89
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.135 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,961,549
Number of Sequences: 5004
Number of extensions: 62446
Number of successful extensions: 221
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 216
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 319939482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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