Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31915
         (700 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70307-11|CAA94337.1|  488|Caenorhabditis elegans Hypothetical p...    29   2.4  
Z81453-4|CAB03794.1|  283|Caenorhabditis elegans Hypothetical pr...    27   9.8  

>Z70307-11|CAA94337.1|  488|Caenorhabditis elegans Hypothetical
           protein C39E9.10 protein.
          Length = 488

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 20/57 (35%), Positives = 30/57 (52%)
 Frame = -3

Query: 362 KYSYSGFPTLQTETHYCFTAEIGGVAVPTRVVSQEVLPPVKNYLLDCLVNRFKRKSI 192
           +Y+ +G  T Q +T+Y  +  +GG+     ++S  V  PV  YL D    RF RK I
Sbjct: 25  RYTVAGVLT-QVQTYYNISDSLGGLIQTVFLISFMVFSPVCGYLGD----RFNRKWI 76


>Z81453-4|CAB03794.1|  283|Caenorhabditis elegans Hypothetical
           protein B0250.6 protein.
          Length = 283

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -1

Query: 526 LLLIGIHTLLIYILFLLRICVVELTAHLVLSGYW 425
           +LLI + T LI ILF + IC +     L++S +W
Sbjct: 1   MLLIAVLTTLISILFAITICYLNFL--LLISIFW 32


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,942,961
Number of Sequences: 27780
Number of extensions: 322347
Number of successful extensions: 696
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)