Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31910
(475 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1118 + 27756288-27756337,27756505-27756619,27756883-277570... 134 3e-32
01_05_0431 - 22084474-22084635,22084740-22084844,22084931-220850... 64 6e-11
02_04_0261 + 21363787-21363891,21364185-21364286,21365854-213659... 62 2e-10
06_01_1052 + 8312752-8312862,8312969-8313041,8313285-8313362,831... 46 2e-05
01_06_0663 - 30991390-30992340 38 0.004
12_02_0842 - 23588826-23589198,23589548-23590203 32 0.21
03_02_0386 + 8009884-8010133,8010274-8010338,8010545-8010658,801... 31 0.47
05_07_0134 - 27911920-27912762 31 0.63
07_01_0885 + 7353926-7354770,7354845-7355487 30 0.83
03_02_0207 - 6411324-6412895 29 2.5
01_07_0175 - 41715304-41716760,41717200-41717500,41718109-41718369 28 4.4
01_01_1099 - 8700627-8700710,8701148-8701200,8701287-8701344,870... 27 5.8
11_04_0470 - 18092681-18092695,18092725-18092811,18093528-180935... 27 7.7
08_02_0707 - 20212190-20214592 27 7.7
03_06_0327 - 33158131-33158315,33158586-33158639,33159149-331591... 27 7.7
>06_03_1118 +
27756288-27756337,27756505-27756619,27756883-27757033,
27757219-27757301,27757424-27757519,27757615-27757757,
27757858-27757942,27758158-27758237,27758335-27758422
Length = 296
Score = 134 bits (324), Expect = 3e-32
Identities = 63/137 (45%), Positives = 88/137 (64%)
Frame = +2
Query: 14 MGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAECMNMGIKMGLEPKVLLDVLNNSSARS 193
MG K +CG G+G VAK+ NNM M I+ + +E +G +G++ VL D+ N SSAR
Sbjct: 151 MGKKTIYCGGAGNGSVAKICNNMAMAISMLGVSEAFALGQNLGIKASVLTDIFNCSSARC 210
Query: 194 WSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDLELASGMALGIRSPIPLGAVATQLYR 373
WS++ Y PVPG++ PSSRNYDGGF ++LM KDL+LA A G+ P G+ A ++YR
Sbjct: 211 WSSDTYNPVPGVMMDVPSSRNYDGGFTSKLMTKDLDLAMASASGVGFNCPFGSQALEIYR 270
Query: 374 IVQSRGYGQKDFSFVFQ 424
+ + G KDFS F+
Sbjct: 271 KLCADGCELKDFSCAFR 287
>01_05_0431 -
22084474-22084635,22084740-22084844,22084931-22085003,
22085109-22085179,22085429-22085548,22085631-22085715,
22085812-22085867,22085978-22086053,22086546-22086611,
22086843-22087060
Length = 343
Score = 64.1 bits (149), Expect = 6e-11
Identities = 39/133 (29%), Positives = 66/133 (49%)
Frame = +2
Query: 26 QFHCGQIGSGQVAKLTNNMLMGITGMATAECMNMGIKMGLEPKVLLDVLNNSSARSWSTE 205
+F G +G G KL NM+MG ++ +E + + K+GL+P L++V++ +
Sbjct: 209 RFFLGDVGKGADMKLVVNMVMGSMMVSFSEGLLLSEKVGLDPNTLVEVISQGA------- 261
Query: 206 VYCPVPGLVPTAPSSRNYDGGFKNELMVKDLELASGMALGIRSPIPLGAVATQLYRIVQS 385
+ P+ L + Y F + KDL LA +A + IP A A +LY++ +S
Sbjct: 262 ISAPMFSLKGPSMVKAAYPTAFPLKHQQKDLRLALALAESVSQSIPTVAAANELYKVAKS 321
Query: 386 RGYGQKDFSFVFQ 424
G +DFS V +
Sbjct: 322 LGLADQDFSAVIE 334
>02_04_0261 +
21363787-21363891,21364185-21364286,21365854-21365964,
21366233-21366334,21366901-21367016,21367180-21367258,
21367347-21367517,21367617-21367712
Length = 293
Score = 62.1 bits (144), Expect = 2e-10
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Frame = +2
Query: 14 MGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAECMNMGIKMGLEPKVLLDVLNNSSARS 193
+G K F G+IG+G KL NM+MG A +E +++ GL P+ LLDVL+ + +
Sbjct: 153 LGKKSFFLGEIGNGAKMKLVVNMIMGSMMNALSEGLSLADNSGLSPQTLLDVLDLGAIAN 212
Query: 194 WSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDLELASGMALGIRSPI--PLGAVATQL 367
P+ L + +Y+ F + KD+ LA +ALG + + P+ A + +
Sbjct: 213 -------PMFKLKGPSMLQGSYNPAFPLKHQQKDMRLA--LALGDENAVSMPVAAASNEA 263
Query: 368 YRIVQSRGYGQKDFSFVFQ 424
++ +S G G DFS V++
Sbjct: 264 FKKARSLGLGDLDFSAVYE 282
>06_01_1052 +
8312752-8312862,8312969-8313041,8313285-8313362,
8313443-8313523,8313706-8313779,8313865-8313919,
8314031-8314079,8314222-8314359,8314455-8314536,
8315131-8315209,8315357-8315400,8315479-8315673,
8316110-8316185,8317427-8317507,8317623-8317703,
8318128-8318204,8318402-8318499,8318672-8318809,
8319397-8319478,8319564-8319642,8319885-8319931,
8320014-8320228,8320330-8320450,8320529-8320648,
8320731-8320849,8320964-8321036,8321112-8321231,
8321538-8321606,8321756-8321926,8322004-8322051,
8322192-8322333,8323244-8323341,8323684-8323828,
8323928-8324013,8324112-8324222,8324456-8324530,
8324836-8324901,8325036-8325224,8325315-8325425,
8326616-8326696,8327192-8327371
Length = 1385
Score = 46.0 bits (104), Expect = 2e-05
Identities = 30/123 (24%), Positives = 58/123 (47%)
Frame = +2
Query: 38 GQIGSGQVAKLTNNMLMGITGMATAECMNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCP 217
G G+ K+ N +L G+ + AE M G ++ L + L +++ ++ SW
Sbjct: 485 GGCGAASSVKMVNQLLAGVHIASAAEAMAFGARLNLRTRRLFEIIQHARGYSWMFGNR-- 542
Query: 218 VPGLVPTAPSSRNYDGGFKNELMVKDLELASGMALGIRSPIPLGAVATQLYRIVQSRGYG 397
VP ++ +Y ++ VKDL + S + R P+ + ++A QL+ + G+G
Sbjct: 543 VPHML-----DNDYTPYSAVDIFVKDLGIVSHESSNARIPLHVSSIAHQLFLSGSASGWG 597
Query: 398 QKD 406
+ D
Sbjct: 598 RFD 600
>01_06_0663 - 30991390-30992340
Length = 316
Score = 37.9 bits (84), Expect = 0.004
Identities = 34/122 (27%), Positives = 53/122 (43%)
Frame = +2
Query: 32 HCGQIGSGQVAKLTNNMLMGITGMATAECMNMGIKMGLEPKVLLDVLNNSSARSWSTEVY 211
+ G G+GQ AKL N + + T + E M K GL+ L+ ++ +A S S ++Y
Sbjct: 178 YMGGPGAGQRAKLGNQIAIASTMVGLVEGMVYAHKAGLDVAKWLEAISTGAAGSKSLDLY 237
Query: 212 CPVPGLVPTAPSSRNYDGGFKNELMVKDLELASGMALGIRSPIPLGAVATQLYRIVQSRG 391
R+ GF VKDL + + +P A+A QLY + + G
Sbjct: 238 -------GKRMLERDMAAGFYVRHFVKDLGICLSECQAMGLALPGLALAHQLYVSLLAHG 290
Query: 392 YG 397
G
Sbjct: 291 EG 292
>12_02_0842 - 23588826-23589198,23589548-23590203
Length = 342
Score = 32.3 bits (70), Expect = 0.21
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = -2
Query: 249 LDGAVGTSPGTGQYTSVDQERADELFSTSNRTFGSSPILMPMFMHSAVAIPVMPINILLV 70
LDG G G+Y + ++ AD+L + +R ++PIL P S + + + L
Sbjct: 128 LDGDERGCAG-GRYDWLLEDFADKLVNDHHRRMMAAPILPPWMSSSPSSSSSPSVTLSLA 186
Query: 69 SLATCPEPICP 37
S A P P P
Sbjct: 187 SAAVAPAPAAP 197
>03_02_0386 +
8009884-8010133,8010274-8010338,8010545-8010658,
8010736-8010895,8010975-8011093,8011209-8011635,
8011834-8012057,8012863-8012973,8013056-8013188,
8013259-8013365,8013430-8013444,8013482-8013571,
8013855-8013917,8013973-8014053,8014136-8014208,
8014312-8014367,8014460-8014554,8014649-8014683,
8015449-8015525
Length = 764
Score = 31.1 bits (67), Expect = 0.47
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = +2
Query: 113 ECMNMGIKMGLEPKVLLDV-LNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMV 289
+C++MG++ G PK+ +DV L + R +V + L+ R+YDG + E M
Sbjct: 484 KCIDMGMEFGTLPKMDVDVPLTSLHIRRTLLDVPKKIDILIVIMADDRSYDG--EIEEMC 541
Query: 290 KDLELASGMALGIRSPIPLGAVATQL-YRIVQS 385
+ L + L S L VA Q+ ++V+S
Sbjct: 542 ESLRIVYVFCLPCLSKRNLKRVARQIQLKVVKS 574
>05_07_0134 - 27911920-27912762
Length = 280
Score = 30.7 bits (66), Expect = 0.63
Identities = 26/124 (20%), Positives = 53/124 (42%), Gaps = 2/124 (1%)
Frame = +2
Query: 32 HCGQIGSGQVAKLTNNMLMGITGMATAECMNMGIKMGLEPKVLLDVLNNSSARSWSTEVY 211
+ G GSGQ +K+ N + + + +E + GL+ + LD ++ +A S +++
Sbjct: 145 YMGPPGSGQSSKIANQIAVAGAVVGASEALAFANAAGLDAPLFLDAVSKGAAGSRVMDIF 204
Query: 212 CPVPGLVPTAPSSRNYDGGFKNELMVKDLELASGMALGIR--SPIPLGAVATQLYRIVQS 385
R + G + ++KDL +A G +P A+ Q++ + +
Sbjct: 205 -------GERMLRREFASGGSVKYIIKDLGMALETEEGPEGAKALPGAAMFRQMFSAMAA 257
Query: 386 RGYG 397
G G
Sbjct: 258 NGDG 261
>07_01_0885 + 7353926-7354770,7354845-7355487
Length = 495
Score = 30.3 bits (65), Expect = 0.83
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 179 SSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDLE 301
S+ R W E+YCPV ++ P+ + D + L + LE
Sbjct: 216 SAIRLWKVELYCPVVAMIMEHPAHQTKDEKLQFSLNYQHLE 256
>03_02_0207 - 6411324-6412895
Length = 523
Score = 28.7 bits (61), Expect = 2.5
Identities = 19/34 (55%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -3
Query: 440 FLLSVA-GRRTRSLSGRSPWTARCGTVELRPRPM 342
FL+SVA RT S S RS AR T ELRP P+
Sbjct: 11 FLVSVALVVRTWSASRRSHEKARYATAELRPYPL 44
>01_07_0175 - 41715304-41716760,41717200-41717500,41718109-41718369
Length = 672
Score = 27.9 bits (59), Expect = 4.4
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = -1
Query: 172 QHVQQNLRFESHFNAHVHALSCSHSGDAHQHIVGQLSHLS*ADLSAVELLSSHXL 8
Q + + +R ++H N V +S SG+ +G LS+L D ELL+ L
Sbjct: 376 QELAEQIR-DTHLNIFVKIISSPTSGNEKAAAIGILSNLPVTDKKITELLTEANL 429
>01_01_1099 -
8700627-8700710,8701148-8701200,8701287-8701344,
8701886-8702032,8702386-8702448,8702559-8702630,
8703154-8703234,8703312-8703362,8703519-8703615,
8704154-8704384,8704882-8705142,8705231-8705394,
8705547-8705586,8707223-8707323
Length = 500
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = -2
Query: 141 PILMPMFMHSAVAIPVMPINILLVSL 64
PILMP+ + S + +P +PIN+LL ++
Sbjct: 161 PILMPIDL-SLIDVPRLPINLLLTTV 185
>11_04_0470 -
18092681-18092695,18092725-18092811,18093528-18093593,
18093696-18093740,18093850-18093903,18093987-18094082,
18094161-18094241,18095634-18095714,18095798-18095884,
18095976-18096074,18096644-18096769,18098162-18098248,
18098321-18098389,18098711-18098806,18099053-18099169,
18099710-18099790,18099873-18100010,18100307-18100580,
18100735-18100830,18101612-18101757,18102883-18103141,
18103434-18103537,18103623-18103748,18103872-18103982,
18104200-18104304
Length = 881
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -1
Query: 178 VVQHVQQNLRFESHFNAHVHALSCSHSGDAHQHIVGQLSH 59
V++ +++NL +S F+A+ S D IVGQL++
Sbjct: 527 VIERLEENLEIQSTFDAYEVDQSVGEHKDLLLQIVGQLTN 566
>08_02_0707 - 20212190-20214592
Length = 800
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 142 SHFNAHVHALSCSHSGDAHQHIVGQLSH 59
SH ++H H+ S SHS +H H+ G H
Sbjct: 497 SHSHSHSHSHSHSHS-HSHSHVHGHEDH 523
>03_06_0327 -
33158131-33158315,33158586-33158639,33159149-33159180,
33159275-33159369,33159466-33159539,33159643-33159778,
33159874-33159937,33160017-33160079,33160160-33160299,
33160487-33160627,33160747-33160868,33160947-33161112,
33161194-33161313,33161580-33161651,33161787-33161843,
33162036-33162152,33162231-33162369,33162794-33162900,
33162972-33163081,33163172-33163305,33163397-33163546,
33163635-33163840,33166123-33166818
Length = 1059
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/64 (23%), Positives = 27/64 (42%)
Frame = +2
Query: 173 NNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDLELASGMALGIRSPIPLGA 352
++S+ + P P TAPS+ F+ +L V + LA A+ + P G
Sbjct: 121 HSSAPAPYQPAAAAPAPSSSSTAPSATALAKEFEQKLFVSETALAPPAAVASAAAAPAGE 180
Query: 353 VATQ 364
+ +
Sbjct: 181 ASVE 184
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,433,429
Number of Sequences: 37544
Number of extensions: 336477
Number of successful extensions: 1098
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1093
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 967140324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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