Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31906
(725 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 23 2.2
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 23 2.2
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 23 2.9
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 23 2.9
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 3.9
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 22 5.1
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 22 6.8
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 22 6.8
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 6.8
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 22 6.8
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 9.0
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.4 bits (48), Expect = 2.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 291 DNVDYRNESRNIKELHYS 344
+N +Y N + N K LHY+
Sbjct: 320 NNYNYNNYNNNYKPLHYN 337
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 23.4 bits (48), Expect = 2.2
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -3
Query: 126 RTNDPPYTLVYSLALYPRAEFLQPGG 49
+ N+ P + +Y + EFL PGG
Sbjct: 50 KLNNIPKSYGIKCEIYAKCEFLNPGG 75
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 23.0 bits (47), Expect = 2.9
Identities = 7/15 (46%), Positives = 13/15 (86%)
Frame = -1
Query: 548 VFHRIYTAFDALSEP 504
+ +++YTAFD L++P
Sbjct: 439 MLNQLYTAFDVLTDP 453
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 23.0 bits (47), Expect = 2.9
Identities = 7/15 (46%), Positives = 13/15 (86%)
Frame = -1
Query: 548 VFHRIYTAFDALSEP 504
+ +++YTAFD L++P
Sbjct: 439 MLNQLYTAFDVLTDP 453
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.6 bits (46), Expect = 3.9
Identities = 20/69 (28%), Positives = 29/69 (42%)
Frame = +3
Query: 294 NVDYRNESRNIKELHYSRYGLDPEETVDTGLLYGYSGNNSIKSLVDELVKIYCGHISYEF 473
N +YR + R ++LH + L E T + Y S KS +E G S E
Sbjct: 242 NREYRKKDRRYEKLHNEKEKLLEERT--SRERYSRSREREQKSYKNEREYRKYGETSKER 299
Query: 474 THLESEAER 500
+ +E ER
Sbjct: 300 SRDRTERER 308
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 22.2 bits (45), Expect = 5.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 384 LLYGYSGNNSIKSLVDELVKIY 449
L+ G SGN K L D+L+ Y
Sbjct: 15 LISGCSGNPDAKRLYDDLLSNY 36
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 6.8
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -2
Query: 685 NKVEKKVNNDSAPSPQYLFTVG 620
N + + + ++AP+PQ+L G
Sbjct: 369 NTINGRADEEAAPAPQHLIHPG 390
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 6.8
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -2
Query: 685 NKVEKKVNNDSAPSPQYLFTVG 620
N + + + ++AP+PQ+L G
Sbjct: 369 NTINGRADEEAAPAPQHLIHPG 390
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 6.8
Identities = 20/69 (28%), Positives = 28/69 (40%)
Frame = +3
Query: 294 NVDYRNESRNIKELHYSRYGLDPEETVDTGLLYGYSGNNSIKSLVDELVKIYCGHISYEF 473
N +YR + R ++LH + L E T + Y S KS +E G S E
Sbjct: 231 NREYRKKDRQYEKLHNEKEKLLEERT--SRKRYSRSREREQKSYKNEREYRKYGKTSKER 288
Query: 474 THLESEAER 500
+ E ER
Sbjct: 289 SRDRMERER 297
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.8 bits (44), Expect = 6.8
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -2
Query: 685 NKVEKKVNNDSAPSPQYLFTVG 620
N + + + ++AP+PQ+L G
Sbjct: 307 NTINGRADEEAAPAPQHLIHPG 328
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 141 HSGAGVFGHRPTIADEYEIPED 206
H+G G +GH P E ++P +
Sbjct: 275 HTGLGHYGHHPD-PGEVDLPPE 295
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,416
Number of Sequences: 438
Number of extensions: 4785
Number of successful extensions: 59
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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