Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31905
(434 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ270158-1|ABB76683.1| 236|Homo sapiens brain-specific clathrin... 47 3e-05
M20472-1|AAA59505.1| 218|Homo sapiens CLTA protein. 46 6e-05
M20471-1|AAA51817.1| 248|Homo sapiens CLTA protein. 46 6e-05
BT007170-1|AAP35834.1| 218|Homo sapiens clathrin, light polypep... 46 6e-05
BC019287-1|AAH19287.1| 218|Homo sapiens clathrin, light chain (... 46 6e-05
BC009201-1|AAH09201.1| 218|Homo sapiens clathrin, light chain (... 46 6e-05
AL158830-6|CAD13388.1| 248|Homo sapiens clathrin, light chain (... 46 6e-05
AL158830-5|CAD13387.1| 218|Homo sapiens clathrin, light chain (... 46 6e-05
M20470-1|AAA59506.1| 211|Homo sapiens CLTB protein. 44 2e-04
M20469-1|AAA51818.1| 229|Homo sapiens CLTB protein. 44 2e-04
CR536577-1|CAG38814.1| 211|Homo sapiens CLTB protein. 44 2e-04
BT007028-1|AAP35675.1| 211|Homo sapiens clathrin, light polypep... 44 2e-04
BC006457-1|AAH06457.1| 211|Homo sapiens clathrin, light chain (... 44 2e-04
BC006332-1|AAH06332.1| 211|Homo sapiens clathrin, light chain (... 44 2e-04
BC104806-1|AAI04807.1| 866|Homo sapiens NMDA receptor regulated... 30 4.0
BC093928-1|AAH93928.1| 866|Homo sapiens NMDA receptor regulated... 30 4.0
BC039818-1|AAH39818.1| 614|Homo sapiens NARG1 protein protein. 30 4.0
BC032642-1|AAH32642.1| 614|Homo sapiens NARG1 protein protein. 30 4.0
AY112670-1|AAM48746.1| 866|Homo sapiens transcriptional coactiv... 30 4.0
AY039242-1|AAK68661.1| 866|Homo sapiens gastric cancer antigen ... 30 4.0
AK023402-1|BAB14562.1| 526|Homo sapiens protein ( Homo sapiens ... 30 4.0
AJ314788-1|CAC43228.1| 866|Homo sapiens putative N-acetyltransf... 30 4.0
AF327722-1|AAK15707.1| 866|Homo sapiens putative acetyltransfer... 30 4.0
AC097376-2|AAY40950.1| 866|Homo sapiens unknown protein. 30 4.0
>DQ270158-1|ABB76683.1| 236|Homo sapiens brain-specific clathrin
light polypeptide protein.
Length = 236
Score = 46.8 bits (106), Expect = 3e-05
Identities = 19/38 (50%), Positives = 29/38 (76%), Gaps = 3/38 (7%)
Frame = -3
Query: 420 EGNEWARVSELCDFGP---RRGRDVARLRSIVLQLKQA 316
+G EW RV+ LCDF P ++ +DV+R+RS+++ LKQA
Sbjct: 195 QGTEWERVARLCDFNPKSSKQAKDVSRMRSVLISLKQA 232
>M20472-1|AAA59505.1| 218|Homo sapiens CLTA protein.
Length = 218
Score = 46.0 bits (104), Expect = 6e-05
Identities = 19/37 (51%), Positives = 28/37 (75%), Gaps = 3/37 (8%)
Frame = -3
Query: 417 GNEWARVSELCDFGP---RRGRDVARLRSIVLQLKQA 316
G EW RV+ LCDF P ++ +DV+R+RS+++ LKQA
Sbjct: 178 GTEWERVARLCDFNPKSSKQAKDVSRMRSVLISLKQA 214
>M20471-1|AAA51817.1| 248|Homo sapiens CLTA protein.
Length = 248
Score = 46.0 bits (104), Expect = 6e-05
Identities = 19/37 (51%), Positives = 28/37 (75%), Gaps = 3/37 (8%)
Frame = -3
Query: 417 GNEWARVSELCDFGP---RRGRDVARLRSIVLQLKQA 316
G EW RV+ LCDF P ++ +DV+R+RS+++ LKQA
Sbjct: 208 GTEWERVARLCDFNPKSSKQAKDVSRMRSVLISLKQA 244
>BT007170-1|AAP35834.1| 218|Homo sapiens clathrin, light
polypeptide (Lca) protein.
Length = 218
Score = 46.0 bits (104), Expect = 6e-05
Identities = 19/37 (51%), Positives = 28/37 (75%), Gaps = 3/37 (8%)
Frame = -3
Query: 417 GNEWARVSELCDFGP---RRGRDVARLRSIVLQLKQA 316
G EW RV+ LCDF P ++ +DV+R+RS+++ LKQA
Sbjct: 178 GTEWERVARLCDFNPKSSKQAKDVSRMRSVLISLKQA 214
>BC019287-1|AAH19287.1| 218|Homo sapiens clathrin, light chain
(Lca) protein.
Length = 218
Score = 46.0 bits (104), Expect = 6e-05
Identities = 19/37 (51%), Positives = 28/37 (75%), Gaps = 3/37 (8%)
Frame = -3
Query: 417 GNEWARVSELCDFGP---RRGRDVARLRSIVLQLKQA 316
G EW RV+ LCDF P ++ +DV+R+RS+++ LKQA
Sbjct: 178 GTEWERVARLCDFNPKSSKQAKDVSRMRSVLISLKQA 214
>BC009201-1|AAH09201.1| 218|Homo sapiens clathrin, light chain
(Lca) protein.
Length = 218
Score = 46.0 bits (104), Expect = 6e-05
Identities = 19/37 (51%), Positives = 28/37 (75%), Gaps = 3/37 (8%)
Frame = -3
Query: 417 GNEWARVSELCDFGP---RRGRDVARLRSIVLQLKQA 316
G EW RV+ LCDF P ++ +DV+R+RS+++ LKQA
Sbjct: 178 GTEWERVARLCDFNPKSSKQAKDVSRMRSVLISLKQA 214
>AL158830-6|CAD13388.1| 248|Homo sapiens clathrin, light chain
(Lca) protein.
Length = 248
Score = 46.0 bits (104), Expect = 6e-05
Identities = 19/37 (51%), Positives = 28/37 (75%), Gaps = 3/37 (8%)
Frame = -3
Query: 417 GNEWARVSELCDFGP---RRGRDVARLRSIVLQLKQA 316
G EW RV+ LCDF P ++ +DV+R+RS+++ LKQA
Sbjct: 208 GTEWERVARLCDFNPKSSKQAKDVSRMRSVLISLKQA 244
>AL158830-5|CAD13387.1| 218|Homo sapiens clathrin, light chain
(Lca) protein.
Length = 218
Score = 46.0 bits (104), Expect = 6e-05
Identities = 19/37 (51%), Positives = 28/37 (75%), Gaps = 3/37 (8%)
Frame = -3
Query: 417 GNEWARVSELCDFGP---RRGRDVARLRSIVLQLKQA 316
G EW RV+ LCDF P ++ +DV+R+RS+++ LKQA
Sbjct: 178 GTEWERVARLCDFNPKSSKQAKDVSRMRSVLISLKQA 214
>M20470-1|AAA59506.1| 211|Homo sapiens CLTB protein.
Length = 211
Score = 44.0 bits (99), Expect = 2e-04
Identities = 18/36 (50%), Positives = 27/36 (75%), Gaps = 3/36 (8%)
Frame = -3
Query: 417 GNEWARVSELCDFGPRRG---RDVARLRSIVLQLKQ 319
G EW +V++LCDF P+ +DV+RLRS+++ LKQ
Sbjct: 171 GTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ 206
>M20469-1|AAA51818.1| 229|Homo sapiens CLTB protein.
Length = 229
Score = 44.0 bits (99), Expect = 2e-04
Identities = 18/36 (50%), Positives = 27/36 (75%), Gaps = 3/36 (8%)
Frame = -3
Query: 417 GNEWARVSELCDFGPRRG---RDVARLRSIVLQLKQ 319
G EW +V++LCDF P+ +DV+RLRS+++ LKQ
Sbjct: 189 GTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ 224
>CR536577-1|CAG38814.1| 211|Homo sapiens CLTB protein.
Length = 211
Score = 44.0 bits (99), Expect = 2e-04
Identities = 18/36 (50%), Positives = 27/36 (75%), Gaps = 3/36 (8%)
Frame = -3
Query: 417 GNEWARVSELCDFGPRRG---RDVARLRSIVLQLKQ 319
G EW +V++LCDF P+ +DV+RLRS+++ LKQ
Sbjct: 171 GTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ 206
>BT007028-1|AAP35675.1| 211|Homo sapiens clathrin, light
polypeptide (Lcb) protein.
Length = 211
Score = 44.0 bits (99), Expect = 2e-04
Identities = 18/36 (50%), Positives = 27/36 (75%), Gaps = 3/36 (8%)
Frame = -3
Query: 417 GNEWARVSELCDFGPRRG---RDVARLRSIVLQLKQ 319
G EW +V++LCDF P+ +DV+RLRS+++ LKQ
Sbjct: 171 GTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ 206
>BC006457-1|AAH06457.1| 211|Homo sapiens clathrin, light chain
(Lcb) protein.
Length = 211
Score = 44.0 bits (99), Expect = 2e-04
Identities = 18/36 (50%), Positives = 27/36 (75%), Gaps = 3/36 (8%)
Frame = -3
Query: 417 GNEWARVSELCDFGPRRG---RDVARLRSIVLQLKQ 319
G EW +V++LCDF P+ +DV+RLRS+++ LKQ
Sbjct: 171 GTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ 206
>BC006332-1|AAH06332.1| 211|Homo sapiens clathrin, light chain
(Lcb) protein.
Length = 211
Score = 44.0 bits (99), Expect = 2e-04
Identities = 18/36 (50%), Positives = 27/36 (75%), Gaps = 3/36 (8%)
Frame = -3
Query: 417 GNEWARVSELCDFGPRRG---RDVARLRSIVLQLKQ 319
G EW +V++LCDF P+ +DV+RLRS+++ LKQ
Sbjct: 171 GTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ 206
>BC104806-1|AAI04807.1| 866|Homo sapiens NMDA receptor regulated 1
protein.
Length = 866
Score = 29.9 bits (64), Expect = 4.0
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -1
Query: 356 WHAYGQLCFSSSKLDLAQTTHHVLLKWLEITSQFV*YLIILSVRFR 219
WH YG L S K D A + LKW + Q + L +L ++ R
Sbjct: 83 WHVYGLLQRSDKKYDEAIKCYRNALKWDKDNLQILRDLSLLQIQMR 128
>BC093928-1|AAH93928.1| 866|Homo sapiens NMDA receptor regulated 1
protein.
Length = 866
Score = 29.9 bits (64), Expect = 4.0
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -1
Query: 356 WHAYGQLCFSSSKLDLAQTTHHVLLKWLEITSQFV*YLIILSVRFR 219
WH YG L S K D A + LKW + Q + L +L ++ R
Sbjct: 83 WHVYGLLQRSDKKYDEAIKCYRNALKWDKDNLQILRDLSLLQIQMR 128
>BC039818-1|AAH39818.1| 614|Homo sapiens NARG1 protein protein.
Length = 614
Score = 29.9 bits (64), Expect = 4.0
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -1
Query: 356 WHAYGQLCFSSSKLDLAQTTHHVLLKWLEITSQFV*YLIILSVRFR 219
WH YG L S K D A + LKW + Q + L +L ++ R
Sbjct: 83 WHVYGLLQRSDKKYDEAIKCYRNALKWDKDNLQILRDLSLLQIQMR 128
>BC032642-1|AAH32642.1| 614|Homo sapiens NARG1 protein protein.
Length = 614
Score = 29.9 bits (64), Expect = 4.0
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -1
Query: 356 WHAYGQLCFSSSKLDLAQTTHHVLLKWLEITSQFV*YLIILSVRFR 219
WH YG L S K D A + LKW + Q + L +L ++ R
Sbjct: 83 WHVYGLLQRSDKKYDEAIKCYRNALKWDKDNLQILRDLSLLQIQMR 128
>AY112670-1|AAM48746.1| 866|Homo sapiens transcriptional
coactivator tubedown-100 protein.
Length = 866
Score = 29.9 bits (64), Expect = 4.0
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -1
Query: 356 WHAYGQLCFSSSKLDLAQTTHHVLLKWLEITSQFV*YLIILSVRFR 219
WH YG L S K D A + LKW + Q + L +L ++ R
Sbjct: 83 WHVYGLLQRSDKKYDEAIKCYRNALKWDKDNLQILRDLSLLQIQMR 128
>AY039242-1|AAK68661.1| 866|Homo sapiens gastric cancer antigen
Ga19 protein.
Length = 866
Score = 29.9 bits (64), Expect = 4.0
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -1
Query: 356 WHAYGQLCFSSSKLDLAQTTHHVLLKWLEITSQFV*YLIILSVRFR 219
WH YG L S K D A + LKW + Q + L +L ++ R
Sbjct: 83 WHVYGLLQRSDKKYDEAIKCYRNALKWDKDNLQILRDLSLLQIQMR 128
>AK023402-1|BAB14562.1| 526|Homo sapiens protein ( Homo sapiens
cDNA FLJ13340 fis, clone OVARC1001942, weakly similar to
N-TERMINAL ACETYLTRANSFERASE 1 (EC 2.3.1.88). ).
Length = 526
Score = 29.9 bits (64), Expect = 4.0
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -1
Query: 356 WHAYGQLCFSSSKLDLAQTTHHVLLKWLEITSQFV*YLIILSVRFR 219
WH YG L S K D A + LKW + Q + L +L ++ R
Sbjct: 83 WHVYGLLQRSDKKYDEAIKCYRNALKWDKDNLQILRDLSLLQIQMR 128
>AJ314788-1|CAC43228.1| 866|Homo sapiens putative
N-acetyltransferase protein.
Length = 866
Score = 29.9 bits (64), Expect = 4.0
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -1
Query: 356 WHAYGQLCFSSSKLDLAQTTHHVLLKWLEITSQFV*YLIILSVRFR 219
WH YG L S K D A + LKW + Q + L +L ++ R
Sbjct: 83 WHVYGLLQRSDKKYDEAIKCYRNALKWDKDNLQILRDLSLLQIQMR 128
>AF327722-1|AAK15707.1| 866|Homo sapiens putative acetyltransferase
protein.
Length = 866
Score = 29.9 bits (64), Expect = 4.0
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -1
Query: 356 WHAYGQLCFSSSKLDLAQTTHHVLLKWLEITSQFV*YLIILSVRFR 219
WH YG L S K D A + LKW + Q + L +L ++ R
Sbjct: 83 WHVYGLLQRSDKKYDEAIKCYRNALKWDKDNLQILRDLSLLQIQMR 128
>AC097376-2|AAY40950.1| 866|Homo sapiens unknown protein.
Length = 866
Score = 29.9 bits (64), Expect = 4.0
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -1
Query: 356 WHAYGQLCFSSSKLDLAQTTHHVLLKWLEITSQFV*YLIILSVRFR 219
WH YG L S K D A + LKW + Q + L +L ++ R
Sbjct: 83 WHVYGLLQRSDKKYDEAIKCYRNALKWDKDNLQILRDLSLLQIQMR 128
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,281,913
Number of Sequences: 237096
Number of extensions: 1163926
Number of successful extensions: 1848
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1834
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3487985734
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -