Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31901
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL031621-5|CAA20930.1| 437|Caenorhabditis elegans Hypothetical ... 187 5e-48
Z69793-5|CAA93673.2| 441|Caenorhabditis elegans Hypothetical pr... 184 5e-47
Z69793-6|CAI46593.1| 424|Caenorhabditis elegans Hypothetical pr... 184 6e-47
Z81081-1|CAB03090.1| 464|Caenorhabditis elegans Hypothetical pr... 55 5e-08
AF000195-6|AAO61435.1| 350|Caenorhabditis elegans Hypothetical ... 33 0.13
AF000195-5|AAC24265.2| 504|Caenorhabditis elegans Hypothetical ... 33 0.13
AF016684-15|AAB66214.1| 543|Caenorhabditis elegans Hypothetical... 29 2.2
U64600-1|AAK39203.1| 500|Caenorhabditis elegans Hypothetical pr... 29 2.9
AC006772-1|AAF60610.3| 326|Caenorhabditis elegans Hypothetical ... 29 3.8
L16621-7|ABA00181.1| 300|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z82078-2|CAD54160.1| 714|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z82078-1|CAB04944.2| 707|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z83106-5|CAB05492.1| 392|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical pr... 27 8.8
U41556-10|AAM51520.1| 415|Caenorhabditis elegans Hypothetical p... 27 8.8
>AL031621-5|CAA20930.1| 437|Caenorhabditis elegans Hypothetical
protein F28H6.3 protein.
Length = 437
Score = 187 bits (456), Expect = 5e-48
Identities = 99/198 (50%), Positives = 130/198 (65%), Gaps = 1/198 (0%)
Frame = +2
Query: 62 ERYGAGEKSVWVEYIQLAAEYKPAXNLGQGFPDYHAPKHVTEALSQIATSENPL-LHQYT 238
E G ++S+WVE+ +LA E K A +LGQGFPD APK VTE L IA+ + HQYT
Sbjct: 11 ENVGEHQESIWVEFGKLAIENK-AVSLGQGFPDSPAPKFVTEILKDIASHPEKIESHQYT 69
Query: 239 RGFGLPRLVENLSKVYSPLIGRQIDAFNEILVTSGAYEALYSTILGHVDTGDEVIIIEPY 418
R FG P LV LSK+YS G ++A ++IL+T GAY ALY + LG + GDEVIIIEP
Sbjct: 70 RAFGHPDLVGILSKIYSYFYGVNVNATDDILITVGAYNALYYSFLGWISKGDEVIIIEPA 129
Query: 419 FXCYDFMVKCAGGVPXFIALKPKPQGDDISSADWVLDEAELASLFNNRTKMIIVNTPHNP 598
F CY VK AGG P + +K K +G S++ + +D EL N RTKMI++N PHNP
Sbjct: 130 FDCYFPQVKFAGGTPISVVMKLK-EGSK-SASQFTIDFEELEKKINKRTKMIVINNPHNP 187
Query: 599 LGKVFTQRELELIADLCK 652
GK+F++ EL+ IA+L +
Sbjct: 188 TGKLFSREELQHIAELAR 205
>Z69793-5|CAA93673.2| 441|Caenorhabditis elegans Hypothetical
protein R03A10.4a protein.
Length = 441
Score = 184 bits (448), Expect = 5e-47
Identities = 99/212 (46%), Positives = 134/212 (63%), Gaps = 2/212 (0%)
Frame = +2
Query: 23 SVCRTMAEKFRLP-ERYGAGEKSVWVEYIQLAAEYKPAXNLGQGFPDYHAPKHVTEALSQ 199
S CR + P ER S+WVE+ LAAE K A NLGQGFPD APK VT+ L
Sbjct: 14 SRCRMSSSFAPKPAERTAQHSASIWVEFTTLAAETK-AVNLGQGFPDSPAPKFVTDLLEN 72
Query: 200 IATS-ENPLLHQYTRGFGLPRLVENLSKVYSPLIGRQIDAFNEILVTSGAYEALYSTILG 376
++ E HQYTRG+G P LV+ L+K+YS Q+D NE+LVT GAY +LY LG
Sbjct: 73 LSKHPELTAAHQYTRGYGHPMLVDILAKMYSHFYNVQVDPMNEVLVTVGAYLSLYYAFLG 132
Query: 377 HVDTGDEVIIIEPYFXCYDFMVKCAGGVPXFIALKPKPQGDDISSADWVLDEAELASLFN 556
V+ GDEV+IIEP + CY VK AGGVP + + +G S++ + +D A++ S N
Sbjct: 133 WVNKGDEVLIIEPAYDCYYPQVKFAGGVPVPVVMN-LAEG-ATSASQFTIDFADMESKIN 190
Query: 557 NRTKMIIVNTPHNPLGKVFTQRELELIADLCK 652
+TKM+++N PHNP GK+F++ ELE +A++ K
Sbjct: 191 EKTKMLVINNPHNPTGKLFSRHELEKLAEIAK 222
>Z69793-6|CAI46593.1| 424|Caenorhabditis elegans Hypothetical
protein R03A10.4b protein.
Length = 424
Score = 184 bits (447), Expect = 6e-47
Identities = 95/198 (47%), Positives = 129/198 (65%), Gaps = 1/198 (0%)
Frame = +2
Query: 62 ERYGAGEKSVWVEYIQLAAEYKPAXNLGQGFPDYHAPKHVTEALSQIATS-ENPLLHQYT 238
ER S+WVE+ LAAE K A NLGQGFPD APK VT+ L ++ E HQYT
Sbjct: 11 ERTAQHSASIWVEFTTLAAETK-AVNLGQGFPDSPAPKFVTDLLENLSKHPELTAAHQYT 69
Query: 239 RGFGLPRLVENLSKVYSPLIGRQIDAFNEILVTSGAYEALYSTILGHVDTGDEVIIIEPY 418
RG+G P LV+ L+K+YS Q+D NE+LVT GAY +LY LG V+ GDEV+IIEP
Sbjct: 70 RGYGHPMLVDILAKMYSHFYNVQVDPMNEVLVTVGAYLSLYYAFLGWVNKGDEVLIIEPA 129
Query: 419 FXCYDFMVKCAGGVPXFIALKPKPQGDDISSADWVLDEAELASLFNNRTKMIIVNTPHNP 598
+ CY VK AGGVP + + +G S++ + +D A++ S N +TKM+++N PHNP
Sbjct: 130 YDCYYPQVKFAGGVPVPVVMN-LAEG-ATSASQFTIDFADMESKINEKTKMLVINNPHNP 187
Query: 599 LGKVFTQRELELIADLCK 652
GK+F++ ELE +A++ K
Sbjct: 188 TGKLFSRHELEKLAEIAK 205
>Z81081-1|CAB03090.1| 464|Caenorhabditis elegans Hypothetical
protein F42D1.2 protein.
Length = 464
Score = 54.8 bits (126), Expect = 5e-08
Identities = 33/106 (31%), Positives = 55/106 (51%)
Frame = +2
Query: 320 NEILVTSGAYEALYSTILGHVDTGDEVIIIEPYFXCYDFMVKCAGGVPXFIALKPKPQGD 499
+++++ SG AL I + G+ +++ P F Y + + P I KP
Sbjct: 139 DDVVLASGCSHALQMAIEAVANAGENILVPHPGFPLYSTLCR-----PHNIV--DKPYKI 191
Query: 500 DISSADWVLDEAELASLFNNRTKMIIVNTPHNPLGKVFTQRELELI 637
D++ D +D + +A++ ++ TK IIVN P NP G VFT+ LE I
Sbjct: 192 DMTGEDVRIDLSYMATIIDDNTKAIIVNNPGNPTGGVFTKEHLEEI 237
>AF000195-6|AAO61435.1| 350|Caenorhabditis elegans Hypothetical
protein C32F10.8b protein.
Length = 350
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Frame = +2
Query: 509 SADWVLDEAELASLFNNRTK-----MIIVNTPHNPLGKVFTQRELELI 637
S++W +DEAEL FN+ K ++ + P NP G+ ++ +E I
Sbjct: 220 SSNWSMDEAELERSFNDHCKEYDIRVLCIINPGNPTGQALSRENIETI 267
>AF000195-5|AAC24265.2| 504|Caenorhabditis elegans Hypothetical
protein C32F10.8a protein.
Length = 504
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Frame = +2
Query: 509 SADWVLDEAELASLFNNRTK-----MIIVNTPHNPLGKVFTQRELELI 637
S++W +DEAEL FN+ K ++ + P NP G+ ++ +E I
Sbjct: 220 SSNWSMDEAELERSFNDHCKEYDIRVLCIINPGNPTGQALSRENIETI 267
>AF016684-15|AAB66214.1| 543|Caenorhabditis elegans Hypothetical
protein F45C12.15 protein.
Length = 543
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 482 PKPQGDDIS--SADWVLDEAELASLFNNRTKMIIVNTPHNPLGK 607
PKP+ + + SA L + ++ FN R +++ PHN + K
Sbjct: 106 PKPESESLQKISAQLGLTQQQVTGWFNRRNGTYLISGPHNSVSK 149
>U64600-1|AAK39203.1| 500|Caenorhabditis elegans Hypothetical
protein C33D12.2 protein.
Length = 500
Score = 29.1 bits (62), Expect = 2.9
Identities = 23/66 (34%), Positives = 30/66 (45%)
Frame = +2
Query: 221 LLHQYTRGFGLPRLVENLSKVYSPLIGRQIDAFNEILVTSGAYEALYSTILGHVDTGDEV 400
L + TR +LVE L +IG Q D F +L GA E LY + H T E
Sbjct: 287 LKEELTRSLERNKLVEMLKLSEKSIIGGQSDEFKMVL---GALE-LYDKTVAHAMTRYED 342
Query: 401 IIIEPY 418
I + P+
Sbjct: 343 IFMLPH 348
>AC006772-1|AAF60610.3| 326|Caenorhabditis elegans Hypothetical
protein Y46D2A.2 protein.
Length = 326
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +2
Query: 455 GVPXFIALKPKPQGDDISSADWVLDEAELASLFNNRTKMIIVNT 586
G+ F+ L K Q DD + + +V+ +A+ S + ++I+NT
Sbjct: 100 GLTGFLYLTTKKQADDPAFSVYVIKQAQTVSTTQPNSTVVILNT 143
>L16621-7|ABA00181.1| 300|Caenorhabditis elegans Hypothetical
protein ZK688.10 protein.
Length = 300
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +2
Query: 245 FGLPRLVENLSKVYSPL-IGRQIDAFNEILVTSGAYEALYSTILGHVDTGDEVIIIEPYF 421
FGL +V + K++ P + I I++ S + + + G D GD V I+P
Sbjct: 137 FGLLAVVSEIEKIFVPYTVILIIIKVTNIIILSQTIVVIGANLFGVHDFGDSVFGIDPVV 196
Query: 422 XC 427
C
Sbjct: 197 MC 198
>Z82078-2|CAD54160.1| 714|Caenorhabditis elegans Hypothetical
protein W09D6.1b protein.
Length = 714
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 5 HF-IRQLSVCRTMAEKFRLPERYGAGEKSVWVEYIQL 112
HF I ++ CR+ K R+ YG E S W Y ++
Sbjct: 242 HFPISSINSCRSPENKTRVFNVYGVTEVSCWASYFEV 278
>Z82078-1|CAB04944.2| 707|Caenorhabditis elegans Hypothetical
protein W09D6.1a protein.
Length = 707
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 5 HF-IRQLSVCRTMAEKFRLPERYGAGEKSVWVEYIQL 112
HF I ++ CR+ K R+ YG E S W Y ++
Sbjct: 242 HFPISSINSCRSPENKTRVFNVYGVTEVSCWASYFEV 278
>Z83106-5|CAB05492.1| 392|Caenorhabditis elegans Hypothetical
protein F22B8.6 protein.
Length = 392
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 452 GGVPXFIA-LKPKPQGDDISSADWVLDEAELASLFNNRTKMIIVNTPHNPLGKV 610
GG +I + K G ++ S D + D L TKM+ +P NPL KV
Sbjct: 104 GGTIRYIRQIAVKKYGMEVDSVD-LTDVQNLEKAIKPNTKMVWFESPSNPLLKV 156
>Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical protein
C06B8.7 protein.
Length = 3118
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 200 IATSENPLLHQYTRGFGLPRLV 265
+ ++EN + +YTR FG P+LV
Sbjct: 1387 VVSTENAMRMRYTRSFGKPKLV 1408
>U41556-10|AAM51520.1| 415|Caenorhabditis elegans Hypothetical
protein C25B8.7 protein.
Length = 415
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -3
Query: 639 AMSSSSRWVNTLPSGLWGVFT 577
A S S R V T+PSG W FT
Sbjct: 2 AFSLSQRVVETMPSGTWNDFT 22
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,333,598
Number of Sequences: 27780
Number of extensions: 313740
Number of successful extensions: 678
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -