Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31892
         (683 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50101-1|CAA90428.1| 1086|Homo sapiens NAD(P) transhydrogenase p...    62   1e-09
U40490-1|AAC51914.1| 1086|Homo sapiens nicotinamide nucleotide t...    62   1e-09
BC110544-1|AAI10545.1| 1086|Homo sapiens nicotinamide nucleotide...    62   1e-09
BC110543-1|AAI10544.1| 1086|Homo sapiens nicotinamide nucleotide...    62   1e-09

>Z50101-1|CAA90428.1| 1086|Homo sapiens NAD(P) transhydrogenase
           protein.
          Length = 1086

 Score = 62.5 bits (145), Expect = 1e-09
 Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 6/81 (7%)
 Frame = +3

Query: 378 GFHVNVEEDAGAVANFPNKTFEEAGAKITNLKTTFQSDIVLKVR-PLLD-----NEIQNV 539
           GF+V VE  AG  + F +  +  AGA+I   K    SD+V+KVR P+++     +E   +
Sbjct: 86  GFNVVVESGAGEASKFSDDHYRVAGAQIQGAKEVLASDLVVKVRAPMVNPTLGVHEADLL 145

Query: 540 RNEGTLISFLYPAQNQDLIKK 602
           +  GTLISF+YPAQN +L+ K
Sbjct: 146 KTSGTLISFIYPAQNPELLNK 166



 Score = 31.5 bits (68), Expect = 2.9
 Identities = 11/20 (55%), Positives = 18/20 (90%)
 Frame = +1

Query: 259 GVSYTKLSIGVPKEIWQDER 318
           G+ Y +L++GVPKEI+Q+E+
Sbjct: 51  GIPYKQLTVGVPKEIFQNEK 70


>U40490-1|AAC51914.1| 1086|Homo sapiens nicotinamide nucleotide
           transhydrogenase protein.
          Length = 1086

 Score = 62.5 bits (145), Expect = 1e-09
 Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 6/81 (7%)
 Frame = +3

Query: 378 GFHVNVEEDAGAVANFPNKTFEEAGAKITNLKTTFQSDIVLKVR-PLLD-----NEIQNV 539
           GF+V VE  AG  + F +  +  AGA+I   K    SD+V+KVR P+++     +E   +
Sbjct: 86  GFNVVVESGAGEASKFSDDHYRVAGAQIQGAKEVLASDLVVKVRAPMVNPTLGVHEADLL 145

Query: 540 RNEGTLISFLYPAQNQDLIKK 602
           +  GTLISF+YPAQN +L+ K
Sbjct: 146 KTSGTLISFIYPAQNPELLNK 166



 Score = 31.5 bits (68), Expect = 2.9
 Identities = 11/20 (55%), Positives = 18/20 (90%)
 Frame = +1

Query: 259 GVSYTKLSIGVPKEIWQDER 318
           G+ Y +L++GVPKEI+Q+E+
Sbjct: 51  GIPYKQLTVGVPKEIFQNEK 70



 Score = 30.3 bits (65), Expect = 6.7
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +1

Query: 610 ERKMNAFAMDCIPRISRAQAFDAL 681
           +RK    AMD +PR++ AQ +DAL
Sbjct: 169 QRKTTVLAMDQVPRVTIAQGYDAL 192


>BC110544-1|AAI10545.1| 1086|Homo sapiens nicotinamide nucleotide
           transhydrogenase protein.
          Length = 1086

 Score = 62.5 bits (145), Expect = 1e-09
 Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 6/81 (7%)
 Frame = +3

Query: 378 GFHVNVEEDAGAVANFPNKTFEEAGAKITNLKTTFQSDIVLKVR-PLLD-----NEIQNV 539
           GF+V VE  AG  + F +  +  AGA+I   K    SD+V+KVR P+++     +E   +
Sbjct: 86  GFNVVVESGAGEASKFSDDHYRVAGAQIQGAKEVLASDLVVKVRAPMVNPTLGVHEADLL 145

Query: 540 RNEGTLISFLYPAQNQDLIKK 602
           +  GTLISF+YPAQN +L+ K
Sbjct: 146 KTSGTLISFIYPAQNPELLNK 166



 Score = 31.5 bits (68), Expect = 2.9
 Identities = 11/20 (55%), Positives = 18/20 (90%)
 Frame = +1

Query: 259 GVSYTKLSIGVPKEIWQDER 318
           G+ Y +L++GVPKEI+Q+E+
Sbjct: 51  GIPYKQLTVGVPKEIFQNEK 70



 Score = 30.3 bits (65), Expect = 6.7
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +1

Query: 610 ERKMNAFAMDCIPRISRAQAFDAL 681
           +RK    AMD +PR++ AQ +DAL
Sbjct: 169 QRKTTVLAMDQVPRVTIAQGYDAL 192


>BC110543-1|AAI10544.1| 1086|Homo sapiens nicotinamide nucleotide
           transhydrogenase protein.
          Length = 1086

 Score = 62.5 bits (145), Expect = 1e-09
 Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 6/81 (7%)
 Frame = +3

Query: 378 GFHVNVEEDAGAVANFPNKTFEEAGAKITNLKTTFQSDIVLKVR-PLLD-----NEIQNV 539
           GF+V VE  AG  + F +  +  AGA+I   K    SD+V+KVR P+++     +E   +
Sbjct: 86  GFNVVVESGAGEASKFSDDHYRVAGAQIQGAKEVLASDLVVKVRAPMVNPTLGVHEADLL 145

Query: 540 RNEGTLISFLYPAQNQDLIKK 602
           +  GTLISF+YPAQN +L+ K
Sbjct: 146 KTSGTLISFIYPAQNPELLNK 166



 Score = 31.5 bits (68), Expect = 2.9
 Identities = 11/20 (55%), Positives = 18/20 (90%)
 Frame = +1

Query: 259 GVSYTKLSIGVPKEIWQDER 318
           G+ Y +L++GVPKEI+Q+E+
Sbjct: 51  GIPYKQLTVGVPKEIFQNEK 70



 Score = 30.3 bits (65), Expect = 6.7
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +1

Query: 610 ERKMNAFAMDCIPRISRAQAFDAL 681
           +RK    AMD +PR++ AQ +DAL
Sbjct: 169 QRKTTVLAMDQVPRVTIAQGYDAL 192


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,421,998
Number of Sequences: 237096
Number of extensions: 1645158
Number of successful extensions: 2735
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2731
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)