Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31888
(624 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC090932-1|AAH90932.1| 1377|Homo sapiens NIN protein protein. 35 0.27
AY736182-1|AAU86898.1| 1989|Homo sapiens ninein isoform 6 protein. 35 0.27
AF302773-1|AAG33512.2| 2090|Homo sapiens ninein-Lm isoform protein. 35 0.27
AF212162-1|AAF23015.2| 2096|Homo sapiens ninein protein. 35 0.27
AB046785-1|BAB13391.2| 1313|Homo sapiens KIAA1565 protein protein. 35 0.27
AL136164-1|CAI20223.1| 451|Homo sapiens protein ( Human DNA seq... 31 3.3
AK024732-1|BAB14980.1| 252|Homo sapiens protein ( Homo sapiens ... 31 3.3
AF111782-1|AAD29948.1| 1938|Homo sapiens myosin heavy chain prot... 31 4.4
BC016762-1|AAH16762.1| 478|Homo sapiens Unknown (protein for IM... 30 7.6
>BC090932-1|AAH90932.1| 1377|Homo sapiens NIN protein protein.
Length = 1377
Score = 34.7 bits (76), Expect = 0.27
Identities = 33/133 (24%), Positives = 64/133 (48%), Gaps = 6/133 (4%)
Frame = +2
Query: 125 RGQLRATQSLPLQSLEKKRENISIE-EKTSPPLNH-KDRKTITAEKNTKINNKI---DSS 289
+ +LR + LQ K+R + E EK N+ +DR ++ ++N+++ N++
Sbjct: 434 KNELRKEREQILQQAGKQRLELEQEIEKAKTEENYIRDRLALSLKENSRLENELLENAEK 493
Query: 290 IIENRMLSEDKRRYPQGGVTLPNKITPEDLANEMLWLRMDQNYIMAENKKRE-RELQDLV 466
+ E L+ +R + L K D ++ +L+ ++ M +R+ R LQD V
Sbjct: 494 LAEYENLTNKLQRNLEN--VLAEKFGDLDPSSAEFFLQEERLTQMRNEYERQCRVLQDQV 551
Query: 467 DKMTSSSEDYLRQ 505
D++ S E+Y Q
Sbjct: 552 DELQSELEEYRAQ 564
>AY736182-1|AAU86898.1| 1989|Homo sapiens ninein isoform 6 protein.
Length = 1989
Score = 34.7 bits (76), Expect = 0.27
Identities = 33/133 (24%), Positives = 64/133 (48%), Gaps = 6/133 (4%)
Frame = +2
Query: 125 RGQLRATQSLPLQSLEKKRENISIE-EKTSPPLNH-KDRKTITAEKNTKINNKI---DSS 289
+ +LR + LQ K+R + E EK N+ +DR ++ ++N+++ N++
Sbjct: 434 KNELRKEREQILQQAGKQRLELEQEIEKAKTEENYIRDRLALSLKENSRLENELLENAEK 493
Query: 290 IIENRMLSEDKRRYPQGGVTLPNKITPEDLANEMLWLRMDQNYIMAENKKRE-RELQDLV 466
+ E L+ +R + L K D ++ +L+ ++ M +R+ R LQD V
Sbjct: 494 LAEYENLTNKLQRNLEN--VLAEKFGDLDPSSAEFFLQEERLTQMRNEYERQCRVLQDQV 551
Query: 467 DKMTSSSEDYLRQ 505
D++ S E+Y Q
Sbjct: 552 DELQSELEEYRAQ 564
>AF302773-1|AAG33512.2| 2090|Homo sapiens ninein-Lm isoform protein.
Length = 2090
Score = 34.7 bits (76), Expect = 0.27
Identities = 33/133 (24%), Positives = 64/133 (48%), Gaps = 6/133 (4%)
Frame = +2
Query: 125 RGQLRATQSLPLQSLEKKRENISIE-EKTSPPLNH-KDRKTITAEKNTKINNKI---DSS 289
+ +LR + LQ K+R + E EK N+ +DR ++ ++N+++ N++
Sbjct: 434 KNELRKEREQILQQAGKQRLELEQEIEKAKTEENYIRDRLALSLKENSRLENELLENAEK 493
Query: 290 IIENRMLSEDKRRYPQGGVTLPNKITPEDLANEMLWLRMDQNYIMAENKKRE-RELQDLV 466
+ E L+ +R + L K D ++ +L+ ++ M +R+ R LQD V
Sbjct: 494 LAEYENLTNKLQRNLEN--VLAEKFGDLDPSSAEFFLQEERLTQMRNEYERQCRVLQDQV 551
Query: 467 DKMTSSSEDYLRQ 505
D++ S E+Y Q
Sbjct: 552 DELQSELEEYRAQ 564
>AF212162-1|AAF23015.2| 2096|Homo sapiens ninein protein.
Length = 2096
Score = 34.7 bits (76), Expect = 0.27
Identities = 33/133 (24%), Positives = 64/133 (48%), Gaps = 6/133 (4%)
Frame = +2
Query: 125 RGQLRATQSLPLQSLEKKRENISIE-EKTSPPLNH-KDRKTITAEKNTKINNKI---DSS 289
+ +LR + LQ K+R + E EK N+ +DR ++ ++N+++ N++
Sbjct: 440 KNELRKEREQILQQAGKQRLELEQEIEKAKTEENYIRDRLALSLKENSRLENELLENAEK 499
Query: 290 IIENRMLSEDKRRYPQGGVTLPNKITPEDLANEMLWLRMDQNYIMAENKKRE-RELQDLV 466
+ E L+ +R + L K D ++ +L+ ++ M +R+ R LQD V
Sbjct: 500 LAEYENLTNKLQRNLEN--VLAEKFGDLDPSSAEFFLQEERLTQMRNEYERQCRVLQDQV 557
Query: 467 DKMTSSSEDYLRQ 505
D++ S E+Y Q
Sbjct: 558 DELQSELEEYRAQ 570
>AB046785-1|BAB13391.2| 1313|Homo sapiens KIAA1565 protein protein.
Length = 1313
Score = 34.7 bits (76), Expect = 0.27
Identities = 33/133 (24%), Positives = 64/133 (48%), Gaps = 6/133 (4%)
Frame = +2
Query: 125 RGQLRATQSLPLQSLEKKRENISIE-EKTSPPLNH-KDRKTITAEKNTKINNKI---DSS 289
+ +LR + LQ K+R + E EK N+ +DR ++ ++N+++ N++
Sbjct: 472 KNELRKEREQILQQAGKQRLELEQEIEKAKTEENYIRDRLALSLKENSRLENELLENAEK 531
Query: 290 IIENRMLSEDKRRYPQGGVTLPNKITPEDLANEMLWLRMDQNYIMAENKKRE-RELQDLV 466
+ E L+ +R + L K D ++ +L+ ++ M +R+ R LQD V
Sbjct: 532 LAEYENLTNKLQRNLEN--VLAEKFGDLDPSSAEFFLQEERLTQMRNEYERQCRVLQDQV 589
Query: 467 DKMTSSSEDYLRQ 505
D++ S E+Y Q
Sbjct: 590 DELQSELEEYRAQ 602
>AL136164-1|CAI20223.1| 451|Homo sapiens protein ( Human DNA
sequence from clone RP3-331H24 on chromosome 6 Contains
the 5' end of a novel gene, the gene for a novel protein
similar to ).
Length = 451
Score = 31.1 bits (67), Expect = 3.3
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 2/116 (1%)
Frame = +2
Query: 173 KKRENISIEEKTSPPLNHKDRKTITAEKNTKINNKIDSSIIENRMLSEDKRRYPQGGVTL 352
K++ S +K S PL + K K + S++ N +EDK+ P+ V
Sbjct: 317 KEQSEGSKAQKMSSPLASSHNSQTSMHKKAKDSKNSSSAVHLNSKTAEDKKVAPKEPVEE 376
Query: 353 PNKITPEDLANEMLWLRMDQNYIMAE--NKKRERELQDLVDKMTSSSEDYLRQIGN 514
++ +PE +NE R + AE N + E+ + +K S S + + GN
Sbjct: 377 TDRPSPEP-SNEAAKPRNTEKDSNAENMNSQPEKTVTTPTEKKESVSPENNEEGGN 431
>AK024732-1|BAB14980.1| 252|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21079 fis, clone CAS02253. ).
Length = 252
Score = 31.1 bits (67), Expect = 3.3
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 2/116 (1%)
Frame = +2
Query: 173 KKRENISIEEKTSPPLNHKDRKTITAEKNTKINNKIDSSIIENRMLSEDKRRYPQGGVTL 352
K++ S +K S PL + K K + S++ N +EDK+ P+ V
Sbjct: 118 KEQSEGSKAQKMSSPLASSHNSQTSMHKKAKDSKNSSSAVHLNSKTAEDKKVAPKEPVEE 177
Query: 353 PNKITPEDLANEMLWLRMDQNYIMAE--NKKRERELQDLVDKMTSSSEDYLRQIGN 514
++ +PE +NE R + AE N + E+ + +K S S + + GN
Sbjct: 178 TDRPSPEP-SNEAAKPRNTEKDSNAENMNSQPEKTVTTPTEKKESVSPENNEEGGN 232
>AF111782-1|AAD29948.1| 1938|Homo sapiens myosin heavy chain protein.
Length = 1938
Score = 30.7 bits (66), Expect = 4.4
Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 4/117 (3%)
Frame = +2
Query: 167 LEKKRENISIEEKTSPPLNHK--DRKTITAEKNTKINNKIDSSI--IENRMLSEDKRRYP 334
LE+ ++N+ E+T L H+ + + + + K K+++ + +EN + E KR
Sbjct: 1783 LERMKKNL---EQTVKDLQHRLDEAEQLALKGGKKQIQKLENRVRELENELDVEQKR--- 1836
Query: 335 QGGVTLPNKITPEDLANEMLWLRMDQNYIMAENKKRERELQDLVDKMTSSSEDYLRQ 505
G L E EM Y E++K LQDLVDK+ + + Y RQ
Sbjct: 1837 -GAEALKGAHKYERKVKEM-------TYQAEEDRKNILRLQDLVDKLQAKVKSYKRQ 1885
>BC016762-1|AAH16762.1| 478|Homo sapiens Unknown (protein for
IMAGE:4104186) protein.
Length = 478
Score = 29.9 bits (64), Expect = 7.6
Identities = 20/75 (26%), Positives = 31/75 (41%)
Frame = +2
Query: 227 KDRKTITAEKNTKINNKIDSSIIENRMLSEDKRRYPQGGVTLPNKITPEDLANEMLWLRM 406
+D T+ T NN +S++ N + Y LP+ +D A++
Sbjct: 398 QDAPTVKESCKTSSNN---NSMVSNTLAKMRIPNYQLSPTKLPSINKSKDRASKQQQTNS 454
Query: 407 DQNYIMAENKKRERE 451
+NY KKRERE
Sbjct: 455 IRNYFQPSTKKRERE 469
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,377,446
Number of Sequences: 237096
Number of extensions: 1694380
Number of successful extensions: 5312
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5312
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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