Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31880
(717 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1223 + 35033273-35033353,35033455-35033539,35033613-350336... 128 6e-30
02_05_1108 - 34166672-34166695,34166864-34166932,34167031-341671... 40 0.002
02_05_1103 - 34136955-34136978,34137147-34137215,34137314-341374... 40 0.002
02_05_1100 - 34108581-34108584,34109646-34109701,34110470-341105... 40 0.002
02_05_0515 + 29689259-29689535,29689867-29690209,29690475-296907... 33 0.30
01_05_0612 - 23652121-23652400,23653031-23654427 31 1.2
07_01_0552 + 4109906-4109983,4110422-4110484,4110496-4110525,411... 29 2.8
05_02_0131 - 6919143-6920125,6920334-6920529 29 2.8
05_02_0128 - 6890918-6891900,6892929-6893124 29 2.8
11_06_0754 - 26935647-26937780,26940890-26941827 29 3.7
03_01_0343 - 2699518-2700114 29 3.7
01_01_0968 - 7618357-7618529,7618891-7619094,7620896-7621139,762... 29 3.7
06_03_0052 - 16027570-16027617,16027789-16027795,16028103-160283... 28 6.4
04_03_0819 + 20018496-20019487,20019587-20019721,20019834-200199... 28 6.4
>02_05_1223 +
35033273-35033353,35033455-35033539,35033613-35033683,
35034400-35034531,35034654-35034769,35035128-35035251,
35035349-35035417,35035508-35035628,35035707-35035843
Length = 311
Score = 128 bits (308), Expect = 6e-30
Identities = 79/214 (36%), Positives = 124/214 (57%), Gaps = 2/214 (0%)
Frame = +3
Query: 3 QRLKVCGDLGQVLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRR 182
+ LK+ GDLGQ++ Y+ D +SI + SNVVINL+GR+YET+N+ +++V+ +
Sbjct: 17 RHLKLMGDLGQIVPMKYNPRDVDSIKAVMAKSNVVINLIGREYETRNYGFDEVNHHMAEQ 76
Query: 183 IARICREE-GVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRA 359
+A I +E G+ RFI +S L A PS +K GE +V +E+P ATI+R
Sbjct: 77 LAMISKEHGGIMRFIQVSSLGAS-------ASSPSRMLRAKAAGEESVLKEFPEATIMRP 129
Query: 360 SDIYGSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGIVNAARDDDTKC- 536
+ + G+EDR L + + +PL +G +T QPV+V DVA IVN+ +DD T
Sbjct: 130 ATMIGTEDRILNRWA-QFAKNWGFLPLVDSG-STKIQPVYVVDVAAAIVNSLKDDGTSMG 187
Query: 537 EVYQAVGPKRYLLADLVDWFYKLMRKDEKWGGYI 638
+ Y+ GP+ Y + +L + Y+ +R +W YI
Sbjct: 188 KTYELGGPEIYTVHELAELMYETIR---EWPRYI 218
>02_05_1108 -
34166672-34166695,34166864-34166932,34167031-34167154,
34167192-34167256,34167726-34167854,34168473-34168547,
34171613-34171777,34171864-34172063,34172866-34172963,
34173719-34173819,34173915-34174040
Length = 391
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 468 QPVFVSDVAQGIVNAARDDDTKC-EVYQAVGPKRYLLADLVDWFYKLMRKDEKWGGYI 638
QPV+V DVA IVN+ +DD T + Y GP+ Y + DL + Y+ + +W YI
Sbjct: 322 QPVYVVDVAAAIVNSLKDDGTSMGKSYGLGGPEIYTVHDLAELMYETIC---EWPRYI 376
>02_05_1103 -
34136955-34136978,34137147-34137215,34137314-34137437,
34137475-34137539,34138009-34138137,34138756-34138830,
34141896-34142060,34142147-34142346,34143149-34143246,
34144002-34144102,34144198-34144323
Length = 391
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 468 QPVFVSDVAQGIVNAARDDDTKC-EVYQAVGPKRYLLADLVDWFYKLMRKDEKWGGYI 638
QPV+V DVA IVN+ +DD T + Y GP+ Y + DL + Y+ + +W YI
Sbjct: 322 QPVYVVDVAAAIVNSLKDDGTSMGKSYGLGGPEIYTVHDLAELMYETIC---EWPRYI 376
>02_05_1100 -
34108581-34108584,34109646-34109701,34110470-34110509,
34110955-34111066,34111690-34111767,34112004-34112088,
34112596-34112664,34112763-34112886,34112924-34112988,
34113458-34113586,34114205-34114279,34117344-34117508,
34117595-34117794,34118597-34118694,34119450-34119550,
34119649-34119774
Length = 508
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 468 QPVFVSDVAQGIVNAARDDDTKC-EVYQAVGPKRYLLADLVDWFYKLMRKDEKWGGYI 638
QPV+V DVA IVN+ +DD T + Y GP+ Y + DL + Y+ + +W YI
Sbjct: 322 QPVYVVDVAAAIVNSLKDDGTSMGKSYGLGGPEIYTVHDLAELMYETIC---EWPRYI 376
>02_05_0515 +
29689259-29689535,29689867-29690209,29690475-29690746,
29691282-29691478,29691874-29692237,29692831-29692898
Length = 506
Score = 32.7 bits (71), Expect = 0.30
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +3
Query: 66 EESIAKAVRYSNVVINLVGRDYETKNF----KYNDVHVDGVRRIARICREEGVERFIHLS 233
+E + KA+R + V +L K + ++V+++G + C E GV R +++S
Sbjct: 98 KEDVGKALRGVDCVFHLASYGMSGKEMVQAGRADEVNINGTCNVLDACHEHGVRRLVYVS 157
Query: 234 YLNAEEHPKPLV 269
N +P+V
Sbjct: 158 TYNVVFGGEPIV 169
>01_05_0612 - 23652121-23652400,23653031-23654427
Length = 558
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 159 VHVDGVRRIARICREEGVERFIHLSYL-NAEEHPKPLVLKKPSAWKISKYLG 311
+++DG R I +CR G HL + + + L + +P A K+ KY+G
Sbjct: 170 INIDGSRNIGILCRNNGEFVVAHLGGMTSVGDGGSGLPITRPVAAKLCKYVG 221
>07_01_0552 + 4109906-4109983,4110422-4110484,4110496-4110525,
4110567-4110621,4111046-4111143,4112259-4112417,
4112518-4112577,4113436-4113624,4113749-4113802,
4113959-4114045,4114149-4114881,4115282-4115373,
4115739-4115812,4116097-4116199,4116342-4117204,
4117649-4117724,4117861-4117972,4118092-4118168,
4118272-4118352,4118710-4118789,4118860-4118875
Length = 1059
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +3
Query: 402 VNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGIVNAARDDDTKCEVYQAVG 557
+NK + H+ + PLYK ++ P+F+S + + V TK +Y+A G
Sbjct: 876 LNK-KFHARIKPLYKQRFFSILMPIFLSKIKESTVMT-----TKLVLYRAFG 921
>05_02_0131 - 6919143-6920125,6920334-6920529
Length = 392
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 180 RIARICREEGVE-RFIHLSYLNAEEHPKPLVLKKPS 284
++ RIC G+E R+IHL EHP+ + PS
Sbjct: 61 KMKRICHRSGIEKRYIHLDEKLIREHPEIIDKHMPS 96
>05_02_0128 - 6890918-6891900,6892929-6893124
Length = 392
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 180 RIARICREEGVE-RFIHLSYLNAEEHPKPLVLKKPS 284
++ RIC G+E R+IHL EHP+ + PS
Sbjct: 61 KMKRICHRSGIEKRYIHLDEKLIREHPEIIDKHMPS 96
>11_06_0754 - 26935647-26937780,26940890-26941827
Length = 1023
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 204 EGVERFIHLSYLNAEEHPKPLVL 272
EG+++ + LSY N EH KP VL
Sbjct: 446 EGIKQVLDLSYNNLSEHLKPCVL 468
>03_01_0343 - 2699518-2700114
Length = 198
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = -1
Query: 558 AQRLGRLHI*CRRRARHSRYPERRPTQTQAVS 463
AQ LG H+ RR RH P RRPT T S
Sbjct: 40 AQALGG-HMNIHRRHRHRAMPSRRPTATGTTS 70
>01_01_0968 -
7618357-7618529,7618891-7619094,7620896-7621139,
7623008-7623151,7623272-7623487
Length = 326
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 63 DEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRIARICREEG-VERFIHLSY 236
D ES+ A+R ++VVI+ VG V +DG ++ +E G V+RF+ Y
Sbjct: 77 DRESLVAAIRQADVVISAVGH--------RGTVELDGQLKVVEAIKEAGNVKRFVPSEY 127
>06_03_0052 -
16027570-16027617,16027789-16027795,16028103-16028341,
16028432-16028566,16028670-16028888
Length = 215
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/64 (32%), Positives = 35/64 (54%)
Frame = +3
Query: 63 DEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRIARICREEGVERFIHLSYLN 242
D + + KAVR ++VVI++VG Y+DV + ++ IA I ++RFI + N
Sbjct: 78 DHDLLVKAVRAADVVISVVG---------YHDVG-EQMKIIAAIKEAGNIKRFIPSDFGN 127
Query: 243 AEEH 254
+H
Sbjct: 128 DADH 131
>04_03_0819 + 20018496-20019487,20019587-20019721,20019834-20019978,
20020135-20020416,20020649-20020910,20021028-20021224,
20021315-20021425,20022341-20022392,20022442-20022584,
20023121-20023210,20023300-20023800,20024108-20024176,
20024866-20025011,20025475-20025530,20026140-20026286,
20027405-20027530,20027608-20027876,20028026-20028127
Length = 1274
Score = 28.3 bits (60), Expect = 6.4
Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 13/122 (10%)
Frame = +3
Query: 198 REEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTA-TIIRASDIYG 374
+E G+ +FI +S ++ P L S + K E V +YPT+ ++R IYG
Sbjct: 1107 KEFGIPKFILIS---VHDYNLPSFLLN-SGYFTGKRKAESEVLSKYPTSGVVLRPGFIYG 1162
Query: 375 SE--DRF----------LRSLVNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGIVNAAR 518
D F L L++ + + + + + PV V DVA ++N
Sbjct: 1163 KRKVDGFEIPLDVVGQPLEKLLSSVENFTKPLSSLPASDLLLAPPVSVDDVAYAVINGVI 1222
Query: 519 DD 524
DD
Sbjct: 1223 DD 1224
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,996,723
Number of Sequences: 37544
Number of extensions: 385421
Number of successful extensions: 916
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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