Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31880
(717 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT004491-1|AAO42655.1| 327|Drosophila melanogaster GM13757p pro... 301 6e-82
AE014296-3380|AAF51613.1| 416|Drosophila melanogaster CG6020-PA... 299 3e-81
BT029034-1|ABJ16967.1| 324|Drosophila melanogaster IP02858p pro... 272 2e-73
DQ162845-1|ABA42953.1| 1715|Drosophila melanogaster TRF2 protein. 29 6.3
AY069554-1|AAL39699.1| 632|Drosophila melanogaster LD27895p pro... 29 6.3
AJ238442-1|CAB41475.1| 537|Drosophila melanogaster TBP-like fac... 29 6.3
AF136569-1|AAD28784.1| 632|Drosophila melanogaster TATA box bin... 29 6.3
AE014298-1172|AAF46368.2| 632|Drosophila melanogaster CG18009-P... 29 6.3
AE014298-1171|AAF46369.3| 632|Drosophila melanogaster CG18009-P... 29 6.3
AY089344-1|AAL90082.1| 922|Drosophila melanogaster AT16542p pro... 29 8.4
>BT004491-1|AAO42655.1| 327|Drosophila melanogaster GM13757p
protein.
Length = 327
Score = 301 bits (739), Expect = 6e-82
Identities = 148/237 (62%), Positives = 176/237 (74%)
Frame = +3
Query: 6 RLKVCGDLGQVLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRI 185
RLKV GDLGQVLF Y+L D SI AV++SNVVINLVGRD+ETKNFK+ DVHV+G RI
Sbjct: 14 RLKVTGDLGQVLFHFYNLEDPASIRDAVKHSNVVINLVGRDFETKNFKFKDVHVNGAERI 73
Query: 186 ARICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASD 365
ARI RE GVERFIHLS LN E +PK L +K S W SKY GE VR+ +P ATIIR +D
Sbjct: 74 ARIAREAGVERFIHLSSLNVEANPKDLYVKGGSEWLKSKYEGELRVRDAFPNATIIRPAD 133
Query: 366 IYGSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGIVNAARDDDTKCEVY 545
IYGSEDRFLR + R MPL+ G TVKQPV+VSDVAQ I+NAA+D D+ +Y
Sbjct: 134 IYGSEDRFLRYYAHIWRRQFRSMPLWHKGEKTVKQPVYVSDVAQAIINAAKDPDSAGRIY 193
Query: 546 QAVGPKRYLLADLVDWFYKLMRKDEKWGGYIRYDMKYDPILPLKVALVNAISPAYPL 716
QAVGPKRY L++LVDWF++LMRKD+K GY+RYDM++DP LK L + I P P+
Sbjct: 194 QAVGPKRYQLSELVDWFHRLMRKDQKRWGYMRYDMRWDPTFLLKAKLNSFICPGTPI 250
>AE014296-3380|AAF51613.1| 416|Drosophila melanogaster CG6020-PA
protein.
Length = 416
Score = 299 bits (733), Expect = 3e-81
Identities = 147/237 (62%), Positives = 175/237 (73%)
Frame = +3
Query: 6 RLKVCGDLGQVLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRI 185
RLKV GDLGQVLF Y+L D SI AV++SNVVINLVGRD+ETKNFK+ DVHV+G RI
Sbjct: 103 RLKVTGDLGQVLFHFYNLEDPASIRDAVKHSNVVINLVGRDFETKNFKFKDVHVNGAERI 162
Query: 186 ARICREEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASD 365
ARI RE GVER IHLS LN E +PK L +K S W SKY GE VR+ +P ATIIR +D
Sbjct: 163 ARIAREAGVERLIHLSSLNVEANPKDLYVKGGSEWLKSKYEGELRVRDAFPNATIIRPAD 222
Query: 366 IYGSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGIVNAARDDDTKCEVY 545
IYGSEDRFLR + R MPL+ G TVKQPV+VSDVAQ I+NAA+D D+ +Y
Sbjct: 223 IYGSEDRFLRYYAHIWRRQFRSMPLWHKGEKTVKQPVYVSDVAQAIINAAKDPDSAGRIY 282
Query: 546 QAVGPKRYLLADLVDWFYKLMRKDEKWGGYIRYDMKYDPILPLKVALVNAISPAYPL 716
QAVGPKRY L++LVDWF++LMRKD+K GY+RYDM++DP LK L + I P P+
Sbjct: 283 QAVGPKRYQLSELVDWFHRLMRKDQKRWGYMRYDMRWDPTFLLKAKLNSFICPGTPI 339
>BT029034-1|ABJ16967.1| 324|Drosophila melanogaster IP02858p
protein.
Length = 324
Score = 272 bits (668), Expect = 2e-73
Identities = 132/215 (61%), Positives = 159/215 (73%)
Frame = +3
Query: 72 SIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRIARICREEGVERFIHLSYLNAEE 251
SI AV++SNVVINLVGRD+ETKNFK+ DVHV+G RIARI RE GVER IHLS LN E
Sbjct: 33 SIRDAVKHSNVVINLVGRDFETKNFKFKDVHVNGAERIARIAREAGVERLIHLSSLNVEA 92
Query: 252 HPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDIYGSEDRFLRSLVNKMRSHSNL 431
+PK L +K S W SKY GE VR+ +P ATIIR +DIYGSEDRFLR + R
Sbjct: 93 NPKDLYVKGGSEWLKSKYEGELRVRDAFPNATIIRPADIYGSEDRFLRYYAHIWRRQFRS 152
Query: 432 MPLYKNGLATVKQPVFVSDVAQGIVNAARDDDTKCEVYQAVGPKRYLLADLVDWFYKLMR 611
MPL+ G TVKQPV+VSDVAQ I+NAA+D D+ +YQAVGPKRY L++LVDWF++LMR
Sbjct: 153 MPLWHKGEKTVKQPVYVSDVAQAIINAAKDPDSAGRIYQAVGPKRYQLSELVDWFHRLMR 212
Query: 612 KDEKWGGYIRYDMKYDPILPLKVALVNAISPAYPL 716
KD+K GY+RYDM++DP LK L + I P P+
Sbjct: 213 KDQKRWGYMRYDMRWDPTFLLKAKLNSFICPGTPI 247
>DQ162845-1|ABA42953.1| 1715|Drosophila melanogaster TRF2 protein.
Length = 1715
Score = 29.1 bits (62), Expect = 6.3
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +3
Query: 372 GSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGIVNAARDDDTKCEV 542
GS++ FL S NK ++ + NGL T K + +V Q I DD+ K EV
Sbjct: 1202 GSKNMFLTSSENK--ANLPTVASNGNGLITAKMDLLEEEVMQSITVIDDDDEEKKEV 1256
>AY069554-1|AAL39699.1| 632|Drosophila melanogaster LD27895p
protein.
Length = 632
Score = 29.1 bits (62), Expect = 6.3
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +3
Query: 372 GSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGIVNAARDDDTKCEV 542
GS++ FL S NK ++ + NGL T K + +V Q I DD+ K EV
Sbjct: 119 GSKNMFLTSSENK--ANLPTVASNGNGLITAKMDLLEEEVMQSITVIDDDDEEKKEV 173
>AJ238442-1|CAB41475.1| 537|Drosophila melanogaster TBP-like factor
protein.
Length = 537
Score = 29.1 bits (62), Expect = 6.3
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +3
Query: 372 GSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGIVNAARDDDTKCEV 542
GS++ FL S NK ++ + NGL T K + +V Q I DD+ K EV
Sbjct: 24 GSKNMFLTSSENK--ANLPTVASNGNGLITAKMDLLEEEVMQSITVIDDDDEEKKEV 78
>AF136569-1|AAD28784.1| 632|Drosophila melanogaster TATA box
binding protein-relatedfactor 2 protein.
Length = 632
Score = 29.1 bits (62), Expect = 6.3
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +3
Query: 372 GSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGIVNAARDDDTKCEV 542
GS++ FL S NK ++ + NGL T K + +V Q I DD+ K EV
Sbjct: 119 GSKNMFLTSSENK--ANLPTVASNGNGLITAKMDLLEEEVMQSITVIDDDDEEKKEV 173
>AE014298-1172|AAF46368.2| 632|Drosophila melanogaster CG18009-PD,
isoform D protein.
Length = 632
Score = 29.1 bits (62), Expect = 6.3
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +3
Query: 372 GSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGIVNAARDDDTKCEV 542
GS++ FL S NK ++ + NGL T K + +V Q I DD+ K EV
Sbjct: 119 GSKNMFLTSSENK--ANLPTVASNGNGLITAKMDLLEEEVMQSITVIDDDDEEKKEV 173
>AE014298-1171|AAF46369.3| 632|Drosophila melanogaster CG18009-PA,
isoform A protein.
Length = 632
Score = 29.1 bits (62), Expect = 6.3
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +3
Query: 372 GSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGIVNAARDDDTKCEV 542
GS++ FL S NK ++ + NGL T K + +V Q I DD+ K EV
Sbjct: 119 GSKNMFLTSSENK--ANLPTVASNGNGLITAKMDLLEEEVMQSITVIDDDDEEKKEV 173
>AY089344-1|AAL90082.1| 922|Drosophila melanogaster AT16542p
protein.
Length = 922
Score = 28.7 bits (61), Expect = 8.4
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = -1
Query: 645 RSECIHPIFRPSSLVCKTNQPNRQVSSVLAQRLGRLHI*CRRRARHSRYPERRPTQTQ 472
R EC+H S CK + P R S ++L L C +R R + + + QT+
Sbjct: 766 RPECVHCEGEHSEQSCKQHSP-RSCMSSSPRQLSVLETVCEKRTRTVTFEDEKGGQTK 822
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,968,518
Number of Sequences: 53049
Number of extensions: 662047
Number of successful extensions: 1662
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1659
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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