Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31876
(665 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical pr... 61 8e-10
Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical p... 61 8e-10
Z69788-8|CAA93644.3| 483|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical pr... 38 0.008
Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical pr... 38 0.008
AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical ... 38 0.008
AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical ... 38 0.008
U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical pr... 35 0.045
U12965-9|AAA20605.3| 522|Caenorhabditis elegans Hypothetical pr... 35 0.060
U80931-7|AAB38003.2| 526|Caenorhabditis elegans Organic anion t... 32 0.32
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 32 0.32
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 32 0.32
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 32 0.32
AF152095-1|AAF73198.1| 526|Caenorhabditis elegans multispecific... 32 0.32
Z69787-2|CAA93635.2| 474|Caenorhabditis elegans Hypothetical pr... 31 0.73
AC090999-19|AAK26156.1| 575|Caenorhabditis elegans Hypothetical... 31 0.97
Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical p... 30 1.3
Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z68219-5|CAJ43449.1| 343|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z68219-4|CAA92482.2| 359|Caenorhabditis elegans Hypothetical pr... 30 1.3
AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic catio... 30 1.3
Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z99709-5|CAB16860.1| 246|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z68296-1|CAA92589.2| 520|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF125960-2|AAD14736.1| 478|Caenorhabditis elegans Hypothetical ... 29 3.0
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 29 3.0
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 29 3.0
AF016656-3|AAB66037.2| 515|Caenorhabditis elegans Hypothetical ... 29 3.0
AY874872-1|AAX62733.1| 1668|Caenorhabditis elegans chitin syntha... 29 3.9
AF040646-6|AAK31540.1| 510|Caenorhabditis elegans Hypothetical ... 29 3.9
AF040646-5|AAK31539.1| 492|Caenorhabditis elegans Hypothetical ... 29 3.9
AF026210-2|AAB71283.2| 1668|Caenorhabditis elegans Chitin syntha... 29 3.9
Z99281-14|CAB16524.1| 532|Caenorhabditis elegans Hypothetical p... 28 5.2
Z99270-1|CAB16470.4| 500|Caenorhabditis elegans Hypothetical pr... 28 6.8
AL132948-43|CAB61061.2| 511|Caenorhabditis elegans Hypothetical... 28 6.8
Z81099-3|CAB03186.3| 490|Caenorhabditis elegans Hypothetical pr... 27 9.1
>Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 60.9 bits (141), Expect = 8e-10
Identities = 29/109 (26%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Frame = +2
Query: 341 EKGSNSEKA-DFERAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLT 517
++ +SEK + A+E G+GRF L + G+ ++ M+++ +S I P+ C+ ++
Sbjct: 58 QRSPDSEKTFTVDEAVEALGFGRFQLKLSILTGMAWMADAMEMMLLSLISPALACEWGIS 117
Query: 518 TQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKRVLIAIFIVNALAIVAS 664
+ + + + +F GMM+ + WG + D GR++ L +V + V S
Sbjct: 118 SVQQALVTTCVFSGMMLSSTFWGKICDRFGRRKGLTFSTLVACIMGVIS 166
>Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 60.9 bits (141), Expect = 8e-10
Identities = 29/109 (26%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Frame = +2
Query: 341 EKGSNSEKA-DFERAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLT 517
++ +SEK + A+E G+GRF L + G+ ++ M+++ +S I P+ C+ ++
Sbjct: 58 QRSPDSEKTFTVDEAVEALGFGRFQLKLSILTGMAWMADAMEMMLLSLISPALACEWGIS 117
Query: 518 TQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKRVLIAIFIVNALAIVAS 664
+ + + + +F GMM+ + WG + D GR++ L +V + V S
Sbjct: 118 SVQQALVTTCVFSGMMLSSTFWGKICDRFGRRKGLTFSTLVACIMGVIS 166
>Z69788-8|CAA93644.3| 483|Caenorhabditis elegans Hypothetical
protein F09A5.1 protein.
Length = 483
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/87 (20%), Positives = 42/87 (48%)
Frame = +2
Query: 404 RFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLTTQTKGWLNSIIFIGMMVGAYAW 583
R Y+ + + +V+ +D +++ +LP Q ++ G + ++ I M+G+
Sbjct: 5 RKDYISIVILFVVNLINNVDRYTIAGVLPDVQSYYNINDSMGGMIQTVFLISFMIGSPIC 64
Query: 584 GSVADSLGRKRVLIAIFIVNALAIVAS 664
G + D RK V++ ++ + + AS
Sbjct: 65 GYLGDRFNRKYVMLVGIVIWLICVCAS 91
>Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/52 (34%), Positives = 33/52 (63%), Gaps = 7/52 (13%)
Frame = +2
Query: 530 GWLNSII----FIGMMVGAYAWGSVADSLGRKRVL---IAIFIVNALAIVAS 664
GW+ + + FIG M+G++ G +AD +GRK+VL + + +V AL ++ +
Sbjct: 143 GWIRATVQAVYFIGQMIGSFTCGVMADKIGRKKVLFWCLVLQVVCALLLIVA 194
>Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/52 (34%), Positives = 33/52 (63%), Gaps = 7/52 (13%)
Frame = +2
Query: 530 GWLNSII----FIGMMVGAYAWGSVADSLGRKRVL---IAIFIVNALAIVAS 664
GW+ + + FIG M+G++ G +AD +GRK+VL + + +V AL ++ +
Sbjct: 109 GWIRATVQAVYFIGQMIGSFTCGVMADKIGRKKVLFWCLVLQVVCALLLIVA 160
>AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/52 (34%), Positives = 33/52 (63%), Gaps = 7/52 (13%)
Frame = +2
Query: 530 GWLNSII----FIGMMVGAYAWGSVADSLGRKRVL---IAIFIVNALAIVAS 664
GW+ + + FIG M+G++ G +AD +GRK+VL + + +V AL ++ +
Sbjct: 143 GWIRATVQAVYFIGQMIGSFTCGVMADKIGRKKVLFWCLVLQVVCALLLIVA 194
>AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/52 (34%), Positives = 33/52 (63%), Gaps = 7/52 (13%)
Frame = +2
Query: 530 GWLNSII----FIGMMVGAYAWGSVADSLGRKRVL---IAIFIVNALAIVAS 664
GW+ + + FIG M+G++ G +AD +GRK+VL + + +V AL ++ +
Sbjct: 109 GWIRATVQAVYFIGQMIGSFTCGVMADKIGRKKVLFWCLVLQVVCALLLIVA 160
>U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical
protein F23F12.13 protein.
Length = 528
Score = 35.1 bits (77), Expect = 0.045
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +2
Query: 533 WLNSIIFIGMMVGAYAWGSVADSLGRKRVLIAIFIVNALAIVAS 664
W+ +I FIG+++GA +G + D GRK V V L VAS
Sbjct: 98 WVATIQFIGVLIGAITYGHLGDHFGRKPVSFFGISVGILFGVAS 141
>U12965-9|AAA20605.3| 522|Caenorhabditis elegans Hypothetical
protein F23F12.3 protein.
Length = 522
Score = 34.7 bits (76), Expect = 0.060
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +2
Query: 533 WLNSIIFIGMMVGAYAWGSVADSLGRKRVLIAIFIVNALAIVAS 664
W+ +I FIG +VGA +G + D GRK V + + VAS
Sbjct: 98 WIATIQFIGALVGALVYGHLGDHFGRKPVSFVGISIGIIFGVAS 141
>U80931-7|AAB38003.2| 526|Caenorhabditis elegans Organic anion
transporter protein 1 protein.
Length = 526
Score = 32.3 bits (70), Expect = 0.32
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 557 GMMVGAYAWGSVADSLGRKRVLIAIFIVNAL 649
G++VGA +G V+D+ GR++ LI I NA+
Sbjct: 135 GVLVGAAIFGQVSDNFGRRKALIISCIGNAI 165
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 32.3 bits (70), Expect = 0.32
Identities = 27/93 (29%), Positives = 41/93 (44%)
Frame = -3
Query: 402 PYPVSSIARSKSAFSELEPFSGSDFDFLTEGTTPSSAVLEPGPFSCRSPFTSQL*GFLGP 223
P P SS S S SG+ G+T S+ + PG S + T + P
Sbjct: 118 PVPGSSSTIGSSTPSASSSSSGTMSTI--SGSTGSTVTVVPGSSSTFASSTP-IASSSSP 174
Query: 222 GSVSTILCGRAALYGGRGDTQTSLTGGSGATNS 124
GS T+ G ++ YG + +S + G+ +TNS
Sbjct: 175 GSTVTVAPGSSSTYGSSTPSASSSSSGTMSTNS 207
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 32.3 bits (70), Expect = 0.32
Identities = 27/93 (29%), Positives = 41/93 (44%)
Frame = -3
Query: 402 PYPVSSIARSKSAFSELEPFSGSDFDFLTEGTTPSSAVLEPGPFSCRSPFTSQL*GFLGP 223
P P SS S S SG+ G+T S+ + PG S + T + P
Sbjct: 325 PVPGSSSTIGSSTPSASSSSSGTMSTI--SGSTGSTVTVVPGSSSTFASSTP-IASSSSP 381
Query: 222 GSVSTILCGRAALYGGRGDTQTSLTGGSGATNS 124
GS T+ G ++ YG + +S + G+ +TNS
Sbjct: 382 GSTVTVAPGSSSTYGSSTPSASSSSSGTMSTNS 414
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 32.3 bits (70), Expect = 0.32
Identities = 27/93 (29%), Positives = 41/93 (44%)
Frame = -3
Query: 402 PYPVSSIARSKSAFSELEPFSGSDFDFLTEGTTPSSAVLEPGPFSCRSPFTSQL*GFLGP 223
P P SS S S SG+ G+T S+ + PG S + T + P
Sbjct: 325 PVPGSSSTIGSSTPSASSSSSGTMSTI--SGSTGSTVTVVPGSSSTFASSTP-IASSSSP 381
Query: 222 GSVSTILCGRAALYGGRGDTQTSLTGGSGATNS 124
GS T+ G ++ YG + +S + G+ +TNS
Sbjct: 382 GSTVTVAPGSSSTYGSSTPSASSSSSGTMSTNS 414
>AF152095-1|AAF73198.1| 526|Caenorhabditis elegans multispecific
organic anion transporterprotein.
Length = 526
Score = 32.3 bits (70), Expect = 0.32
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 557 GMMVGAYAWGSVADSLGRKRVLIAIFIVNAL 649
G++VGA +G V+D+ GR++ LI I NA+
Sbjct: 135 GVLVGAAIFGQVSDNFGRRKALIISCIGNAI 165
>Z69787-2|CAA93635.2| 474|Caenorhabditis elegans Hypothetical
protein C44C10.3 protein.
Length = 474
Score = 31.1 bits (67), Expect = 0.73
Identities = 9/46 (19%), Positives = 30/46 (65%)
Frame = +2
Query: 527 KGWLNSIIFIGMMVGAYAWGSVADSLGRKRVLIAIFIVNALAIVAS 664
+ + + + ++G++VG +G+++D GRK + I + ++ ++++ +
Sbjct: 85 QSFFSLVQYLGVLVGTVLFGTLSDKYGRKPIGILVIVIAIISLLGT 130
>AC090999-19|AAK26156.1| 575|Caenorhabditis elegans Hypothetical
protein Y82E9BR.16a protein.
Length = 575
Score = 30.7 bits (66), Expect = 0.97
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +2
Query: 527 KGWLNSIIFIGMMVGAYAWGSVADSLGRKRVLIAIFIV 640
K + + ++G M G+ +G + D +GRK+V ++
Sbjct: 133 KATIQAAYYVGQMAGSTTFGMLGDRIGRKKVFFLAIVI 170
>Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical
protein F52F12.1a protein.
Length = 585
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +2
Query: 476 SFILPSAQCDLDLTTQTKGWLN---SIIFIGMMVGAYAWGSVADSLGRKRVLIAIFIVNA 646
S L S + +L + W+ + ++G +G +G VAD GR+R I V
Sbjct: 134 STYLDSLVTEFNLVCDQQAWIEISTTSFYVGSFIGNCLFGYVADKFGRRRSFFVILTVLI 193
Query: 647 LAIVAS 664
+ AS
Sbjct: 194 VCGTAS 199
>Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical
protein F52F12.1b protein.
Length = 568
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +2
Query: 476 SFILPSAQCDLDLTTQTKGWLN---SIIFIGMMVGAYAWGSVADSLGRKRVLIAIFIVNA 646
S L S + +L + W+ + ++G +G +G VAD GR+R I V
Sbjct: 117 STYLDSLVTEFNLVCDQQAWIEISTTSFYVGSFIGNCLFGYVADKFGRRRSFFVILTVLI 176
Query: 647 LAIVAS 664
+ AS
Sbjct: 177 VCGTAS 182
>Z68219-5|CAJ43449.1| 343|Caenorhabditis elegans Hypothetical
protein T05A1.5b protein.
Length = 343
Score = 30.3 bits (65), Expect = 1.3
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 15/80 (18%)
Frame = +2
Query: 458 MDVISMSFILPSAQCDLD----LTTQ-----TKGWL------NSIIFIGMMVGAYAWGSV 592
M +S S++ PS+ C LD +T Q TK + +SI F+G + +
Sbjct: 83 MPTMSPSYMAPSSPCTLDNCSFVTVQNEFNITKTLIDPGEMTSSIFFLGNGILGQIYAVA 142
Query: 593 ADSLGRKRVLIAIFIVNALA 652
AD +GR+ VLIA ++ L+
Sbjct: 143 ADRIGRRPVLIASLFISGLS 162
>Z68219-4|CAA92482.2| 359|Caenorhabditis elegans Hypothetical
protein T05A1.5a protein.
Length = 359
Score = 30.3 bits (65), Expect = 1.3
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 15/80 (18%)
Frame = +2
Query: 458 MDVISMSFILPSAQCDLD----LTTQ-----TKGWL------NSIIFIGMMVGAYAWGSV 592
M +S S++ PS+ C LD +T Q TK + +SI F+G + +
Sbjct: 99 MPTMSPSYMAPSSPCTLDNCSFVTVQNEFNITKTLIDPGEMTSSIFFLGNGILGQIYAVA 158
Query: 593 ADSLGRKRVLIAIFIVNALA 652
AD +GR+ VLIA ++ L+
Sbjct: 159 ADRIGRRPVLIASLFISGLS 178
>AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic cation
transporter 1 protein.
Length = 568
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +2
Query: 476 SFILPSAQCDLDLTTQTKGWLN---SIIFIGMMVGAYAWGSVADSLGRKRVLIAIFIVNA 646
S L S + +L + W+ + ++G +G +G VAD GR+R I V
Sbjct: 117 STYLDSLVTEFNLVCDQQAWIEISTTSFYVGSFIGNCLFGYVADKFGRRRSFFVILTVLI 176
Query: 647 LAIVAS 664
+ AS
Sbjct: 177 VCGTAS 182
>Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical
protein C53B4.1 protein.
Length = 517
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 536 LNSIIFIGMMVGAYAWGSVADSLGRKRVLIAIFIVNALAIVAS 664
L++ FIG ++G A G +AD GR+ + ++ + +V S
Sbjct: 118 LSTATFIGTLLGNIALGFLADKYGRRTIYLSSLLFGIPCVVLS 160
>Z99709-5|CAB16860.1| 246|Caenorhabditis elegans Hypothetical
protein C47B2.5 protein.
Length = 246
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +2
Query: 377 RAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLTTQTKGWL 538
R EL G G +A CGL STS E+ V+ F L ++ Q + L
Sbjct: 188 RGSELIGAGMVVNDWVAFCGLDSTSTELSVVESIFKLGEQGAPTSISNQLRDTL 241
>Z68296-1|CAA92589.2| 520|Caenorhabditis elegans Hypothetical
protein C46C2.2 protein.
Length = 520
Score = 29.1 bits (62), Expect = 3.0
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 551 FIGMMVGAYAWGSVADSLGRKRVLIAIFIV 640
++G+++G G VAD +GRK+ I ++
Sbjct: 116 YVGVLIGNIILGYVADQIGRKKTFILSMLI 145
>AF125960-2|AAD14736.1| 478|Caenorhabditis elegans Hypothetical
protein T12B3.2 protein.
Length = 478
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/41 (26%), Positives = 27/41 (65%)
Frame = +2
Query: 527 KGWLNSIIFIGMMVGAYAWGSVADSLGRKRVLIAIFIVNAL 649
+ + + + ++G+++G +GS++D GR+ + I + I NA+
Sbjct: 85 QSFFSQVQYVGVLIGTLLFGSLSDRFGRRPIGILV-ISNAI 124
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 5 STTSVKFTSPHPHRS*PPEVAERSQTTRKKHIGSSPASY 121
+T +K T+ HPHR PP ++ T+ +H G +S+
Sbjct: 688 NTRHLKRTTEHPHRKQPP---QKRDNTKDQHRGGKKSSH 723
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 5 STTSVKFTSPHPHRS*PPEVAERSQTTRKKHIGSSPASY 121
+T +K T+ HPHR PP ++ T+ +H G +S+
Sbjct: 910 NTRHLKRTTEHPHRKQPP---QKRDNTKDQHRGGKKSSH 945
>AF016656-3|AAB66037.2| 515|Caenorhabditis elegans Hypothetical
protein C35A11.4 protein.
Length = 515
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 542 SIIFIGMMVGAYAWGSVADSLGRKRVLIAIFIVNALA 652
+I+F+G + G+++ +AD +GRK L V LA
Sbjct: 68 AILFLGALAGSFSIRLIADWIGRKNGLYISIAVGVLA 104
>AY874872-1|AAX62733.1| 1668|Caenorhabditis elegans chitin synthase 2
protein.
Length = 1668
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/42 (28%), Positives = 17/42 (40%)
Frame = -2
Query: 238 RILGPRVSFYHPMRAGGFVWWSRGHSNVSHWGEWRYQQRIAC 113
R LG HP G VW+ + + HW + + I C
Sbjct: 887 RRLGAACGRIHPRGDGAMVWYQKFEYAIGHWLQKATEHMIGC 928
>AF040646-6|AAK31540.1| 510|Caenorhabditis elegans Hypothetical
protein H17B01.1b protein.
Length = 510
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +2
Query: 542 SIIFIGMMVGAYAWGSVADSLGRKRVLIAIFIVNALAIVAS 664
S+ +G M+G + G +AD +GR+ A+F N LA+ A+
Sbjct: 104 SVFAVGGMIGGLSSGWLADKVGRRG---ALFYNNLLALAAA 141
>AF040646-5|AAK31539.1| 492|Caenorhabditis elegans Hypothetical
protein H17B01.1a protein.
Length = 492
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +2
Query: 542 SIIFIGMMVGAYAWGSVADSLGRKRVLIAIFIVNALAIVAS 664
S+ +G M+G + G +AD +GR+ A+F N LA+ A+
Sbjct: 86 SVFAVGGMIGGLSSGWLADKVGRRG---ALFYNNLLALAAA 123
>AF026210-2|AAB71283.2| 1668|Caenorhabditis elegans Chitin synthase
protein 2 protein.
Length = 1668
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/42 (28%), Positives = 17/42 (40%)
Frame = -2
Query: 238 RILGPRVSFYHPMRAGGFVWWSRGHSNVSHWGEWRYQQRIAC 113
R LG HP G VW+ + + HW + + I C
Sbjct: 887 RRLGAACGRIHPRGDGAMVWYQKFEYAIGHWLQKATEHMIGC 928
>Z99281-14|CAB16524.1| 532|Caenorhabditis elegans Hypothetical
protein Y57G11C.23 protein.
Length = 532
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +2
Query: 428 VCGLVSTSEEMDVISMS---FILPSAQCDLDLTTQTKGWLNSIIFIGMMVGAYAWGSVAD 598
VC ST+ + V++ + F + D T ++ F+G +VG G ++D
Sbjct: 70 VCPFASTNFDQCVVAANKTDFYSAQYEYQQDCTGLKYFSSSTSTFLGTLVGNLILGYLSD 129
Query: 599 SLGRKRVLIAIFIVNALAIVAS 664
++GR+ V I ++ +++ S
Sbjct: 130 TIGRRPVYIFSILLGVPSVILS 151
>Z99270-1|CAB16470.4| 500|Caenorhabditis elegans Hypothetical
protein Y37A1A.3 protein.
Length = 500
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/32 (37%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 542 SIIFIGMMVGAYAWGSVADSLGRKR-VLIAIF 634
+I F+G GA+ +VA+ GRK+ V++++F
Sbjct: 83 AIFFLGSATGAFLIKTVAERFGRKKGVIVSLF 114
>AL132948-43|CAB61061.2| 511|Caenorhabditis elegans Hypothetical
protein Y39B6A.41 protein.
Length = 511
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = +2
Query: 542 SIIFIGMMVGAYAWGSVADSLGRKR-VLIAIF--IVNALAIVAS 664
S +FIG+ + G + D LGRK +L+ F I+ ++A++ S
Sbjct: 65 SFMFIGLAISFAIMGKLMDGLGRKETILLRSFLGIIGSMAMLTS 108
>Z81099-3|CAB03186.3| 490|Caenorhabditis elegans Hypothetical
protein K08F9.1 protein.
Length = 490
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +2
Query: 542 SIIFIGMMVGAYAWGSVADSLGRKRVLIAIFIVNALA 652
+++F+G + G+++ +A+ +GRK L V LA
Sbjct: 68 AVLFLGALAGSFSIPFIAEGVGRKNGLYISISVGVLA 104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,168,891
Number of Sequences: 27780
Number of extensions: 362214
Number of successful extensions: 1003
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1002
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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