Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31868
         (787 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   3.2  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   3.2  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   4.3  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   5.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   7.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   7.4  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    21   9.8  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 749 CKSYWI*WIRKDVSRATTVTCSCVI 675
           CK ++   +RKD+S A     SC+I
Sbjct: 130 CKGFFKRTVRKDLSYACREEKSCII 154


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 749 CKSYWI*WIRKDVSRATTVTCSCVI 675
           CK ++   +RKD+S A     SC+I
Sbjct: 130 CKGFFKRTVRKDLSYACREEKSCII 154


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +1

Query: 583 ESIRKHMKSMSERYFDKAMRHDNRLITPRILITQEQVTV 699
           E I  H K   E+YF    R ++     R    Q++VTV
Sbjct: 63  EEILLHAKDFLEQYFSSIRRLNSEAHRIRWESVQKEVTV 101


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 634 PYRSNVPTLTSCVCGSIRGPG 572
           PYR N P ++      +R PG
Sbjct: 493 PYRLNKPLMSLITSSEVRQPG 513


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 13/52 (25%), Positives = 21/52 (40%)
 Frame = +3

Query: 132  RHQPSEKHSSVISKGKLTAYFLPH*EKYHTPDHPLRPIYTLGQEGQVPGSHP 287
            RH  S +   ++       Y   H +   +P  P+  + T   +GQ PG  P
Sbjct: 1455 RHATSHELKGLLCGNTYQLYLTSHNKIGSSPSSPVLSVRT---QGQAPGIPP 1503


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 13/52 (25%), Positives = 21/52 (40%)
 Frame = +3

Query: 132  RHQPSEKHSSVISKGKLTAYFLPH*EKYHTPDHPLRPIYTLGQEGQVPGSHP 287
            RH  S +   ++       Y   H +   +P  P+  + T   +GQ PG  P
Sbjct: 1451 RHATSHELKGLLCGNTYQLYLTSHNKIGSSPSSPVLSVRT---QGQAPGIPP 1499


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +2

Query: 557 WTYTMTWA 580
           WTYT+ WA
Sbjct: 170 WTYTIPWA 177


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,099
Number of Sequences: 438
Number of extensions: 4778
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)