Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31857
(718 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3G6.03c |||Maf-like protein|Schizosaccharomyces pombe|chr 1|... 81 2e-16
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 32 0.094
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 31 0.16
SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces pombe... 30 0.29
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.50
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 29 0.50
SPBC28E12.02 ||SPBC9B6.13|RNA-binding protein|Schizosaccharomyce... 29 0.88
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 29 0.88
SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Ma... 28 1.5
SPBC17D11.03c |||conserved fungal protein|Schizosaccharomyces po... 27 2.0
SPBC21H7.05 |sfc6||transcription factor TFIIIC complex subunit S... 27 2.7
SPAC20H4.06c |||RNA-binding protein|Schizosaccharomyces pombe|ch... 27 3.5
SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate |Schizos... 27 3.5
SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr... 27 3.5
SPAC23H3.14 |||LAlv9 family protein|Schizosaccharomyces pombe|ch... 27 3.5
SPBC947.11c |elg1||DNA replication factor C complex subunit Elg1... 27 3.5
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 26 4.7
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 26 4.7
SPBC428.07 |meu6||meiotic chromosome segregation protein Meu6|Sc... 26 4.7
SPCC576.15c |ksg1||serine/threonine protein kinase Ksg1|Schizosa... 26 4.7
SPAC4D7.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 6.2
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 25 8.2
SPAPJ698.03c |prp12|sap130|U2 snRNP-associated protein Sap130 |S... 25 8.2
>SPAC3G6.03c |||Maf-like protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 236
Score = 81.0 bits (191), Expect = 2e-16
Identities = 49/134 (36%), Positives = 73/134 (54%), Gaps = 4/134 (2%)
Frame = +3
Query: 255 LQPVMH-VLKAKKIVLASASPRRAELIENIGL-KVSLCPSLFEENLVPNEFSKFSDFVEE 428
L+ MH LK K+I+LAS SPRR +L E +G V C S F E+L + + ++ +
Sbjct: 14 LETSMHRQLKDKRIILASGSPRRKQLFEQMGFPNVETCVSGFPEDLNKSMYITPWEYAAD 73
Query: 429 TALHKVLEVEKRLTGMGSAPDIVIGADTMVTLDGEMFGKPTSEAEAFVMLSRL--SGRSH 602
T++ K + V ++L +PDIV+ ADT++ LD E+ KP ML +L S H
Sbjct: 74 TSVQKAIAVYEKLAAEEDSPDIVVSADTILILDSEIMEKPNDPKHHLAMLKKLRNSKTPH 133
Query: 603 TVYTGVVVKTGEEI 644
V+T V V E+
Sbjct: 134 KVFTAVSVIVPMEV 147
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 31.9 bits (69), Expect = 0.094
Identities = 39/139 (28%), Positives = 65/139 (46%)
Frame = -1
Query: 658 SVNFTISSPVLTTTPVYTVCERPDNLDSITNASASEVGFPNISPSSVTIVSAPITISGAE 479
S T S+ V T+TP+ T ++ IT+++ P I+ S+V S PIT S A
Sbjct: 2985 STPITSSTVVNTSTPI-TSSSVLNSSTPITSSTVVNTSTP-ITSSTVVNSSTPITSSTA- 3041
Query: 478 PIPVKRFSTSRTL*RAVSSTKSENLLNSFGTKFSSNNDGHKLTLSPMFSISSARRGDALA 299
+ TS T+ + + S ++LNS T +S+ + T +P+ S S A+
Sbjct: 3042 -LNTSTPITSSTVLNSSTPITSSSVLNS-STPITSSTALN--TSTPITSSSVLNSSTAIT 3097
Query: 298 STIFLAFKTCITGCNIFVS 242
S+ + T IT ++ S
Sbjct: 3098 SSSIVNSSTPITSSSVLNS 3116
Score = 31.1 bits (67), Expect = 0.16
Identities = 39/132 (29%), Positives = 60/132 (45%)
Frame = -1
Query: 658 SVNFTISSPVLTTTPVYTVCERPDNLDSITNASASEVGFPNISPSSVTIVSAPITISGAE 479
S T S+ V T+TP+ T + SIT++S P I+ S+V S PIT S
Sbjct: 2349 STPITSSTVVNTSTPI-TSSTALNTSTSITSSSVLNSSTP-ITSSTVVNTSTPITSSSV- 2405
Query: 478 PIPVKRFSTSRTL*RAVSSTKSENLLNSFGTKFSSNNDGHKLTLSPMFSISSARRGDALA 299
+ TS T+ +S S ++LNS T +S++ + T P+ S + +
Sbjct: 2406 -LNSSTPITSSTVVNTSTSITSSSVLNS-STPITSSSVLNSST--PITSSTVVNSSTPIT 2461
Query: 298 STIFLAFKTCIT 263
S+ L T IT
Sbjct: 2462 SSSVLNSSTPIT 2473
Score = 28.7 bits (61), Expect = 0.88
Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Frame = -1
Query: 640 SSPVLTTTPVYTVCERPDNLDS-ITNASASEVGFPNISPSSVTIVSAPITISGAEPIPVK 464
S P TT + P+N + IT+ +A P I+ SSV S PIT S +
Sbjct: 349 SKPTDTTNSISFANTTPENTSTQITSPTAVNSSTP-ITSSSVLNSSTPITSSSI--LNTS 405
Query: 463 RFSTSRTL*RAVSSTKSENLLNSFGTKFSSNNDGHKLTLSPMFSISSARRGDALASTIFL 284
TS ++ + + S ++LNS T +S+ + T P+ S ++ + S+ L
Sbjct: 406 TPITSSSVLNSSTPITSSSILNS-STPITSSTVLNSST--PITSSTALNTSTPITSSSVL 462
Query: 283 AFKTCITGCNIFVS 242
T IT ++ S
Sbjct: 463 NSSTPITSSSVLNS 476
Score = 27.1 bits (57), Expect = 2.7
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 3/142 (2%)
Frame = -1
Query: 658 SVNFTISSPVLTTTPVYTVCERPDNLDSITNASASEVGFPNISPSSVTIVSAPITISGAE 479
S T S+ V ++TP+ T + IT++S P I+ S+V S PIT S A
Sbjct: 3369 STPITSSTVVNSSTPI-TSSTALNTSTPITSSSVLNSSTP-ITSSTVVNSSTPITSSTA- 3425
Query: 478 PIPVKRFSTSRTL*RAVSSTKSENLLNSFGTKFSSN--NDGHKLTLSPMFSISS-ARRGD 308
+ TS T+ + + S ++LNS SS+ N +T S + + S+
Sbjct: 3426 -LNTSTPITSSTVVNSSTPITSSSVLNSSTAIASSSILNSSTPITSSSVLNSSTPISSST 3484
Query: 307 ALASTIFLAFKTCITGCNIFVS 242
+ S++ + + ++ + VS
Sbjct: 3485 VITSSVVIGSSSVLSYASSIVS 3506
Score = 26.2 bits (55), Expect = 4.7
Identities = 36/132 (27%), Positives = 60/132 (45%)
Frame = -1
Query: 658 SVNFTISSPVLTTTPVYTVCERPDNLDSITNASASEVGFPNISPSSVTIVSAPITISGAE 479
S T SS + ++TP+ T ++ IT++S P I+ S+V S PIT S
Sbjct: 741 STPITSSSVLNSSTPI-TSSSILNSSTPITSSSVLNSSTP-ITSSTVVNTSTPITSSSV- 797
Query: 478 PIPVKRFSTSRTL*RAVSSTKSENLLNSFGTKFSSNNDGHKLTLSPMFSISSARRGDALA 299
+ TS T+ + + S ++LNS T +S+ + T +P+ S + +
Sbjct: 798 -LNSSTPITSSTVLNSSTPITSSSVLNS-STPITSSTVVN--TSTPITSSTVVNSSTPIT 853
Query: 298 STIFLAFKTCIT 263
S+ L T IT
Sbjct: 854 SSSVLNSSTPIT 865
Score = 26.2 bits (55), Expect = 4.7
Identities = 35/136 (25%), Positives = 60/136 (44%)
Frame = -1
Query: 658 SVNFTISSPVLTTTPVYTVCERPDNLDSITNASASEVGFPNISPSSVTIVSAPITISGAE 479
S T S+ V T+TP+ T ++ IT+++ P I+ S+V S PIT S
Sbjct: 1317 STPITSSTVVNTSTPI-TSSSVLNSSTPITSSTVVNSSTP-ITSSTVVNTSTPITSSTV- 1373
Query: 478 PIPVKRFSTSRTL*RAVSSTKSENLLNSFGTKFSSNNDGHKLTLSPMFSISSARRGDALA 299
+ TS T+ + + S +LNS T +S++ + T P+ S + +
Sbjct: 1374 -VNTSTPITSSTVVNSSTPITSSTVLNS-STPITSSSVLNSST--PITSSTVVNTSTPIT 1429
Query: 298 STIFLAFKTCITGCNI 251
S+ + T IT +
Sbjct: 1430 SSTVVNSSTPITSSTV 1445
Score = 25.4 bits (53), Expect = 8.2
Identities = 34/136 (25%), Positives = 60/136 (44%)
Frame = -1
Query: 658 SVNFTISSPVLTTTPVYTVCERPDNLDSITNASASEVGFPNISPSSVTIVSAPITISGAE 479
S T S+ + T+TP+ T ++ IT+++ P I+ S+V S PIT S
Sbjct: 2157 STPITSSTALNTSTPI-TSSSVLNSSTPITSSTVVNSSTP-ITSSTVVNTSTPITSSTV- 2213
Query: 478 PIPVKRFSTSRTL*RAVSSTKSENLLNSFGTKFSSNNDGHKLTLSPMFSISSARRGDALA 299
+ TS T+ + + S +LNS T +S++ + T P+ S + +
Sbjct: 2214 -VNTSTPITSSTVVNSSTPITSSTVLNS-STPITSSSVLNSST--PITSSTVVNTSTPIT 2269
Query: 298 STIFLAFKTCITGCNI 251
S+ + T IT +
Sbjct: 2270 SSTVVNSSTPITSSTV 2285
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 31.1 bits (67), Expect = 0.16
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 1/116 (0%)
Frame = -1
Query: 664 VDSVNFTISSPVLTTTPVYTVCERPDNLDSIT-NASASEVGFPNISPSSVTIVSAPITIS 488
V S T++ P T TV ++ T + ++S V P+ S S S PI+ S
Sbjct: 429 VSSYVSTVTQPASTRVQTTTVSSISTSVKQPTASVASSSVSVPS-SSSVQPQSSTPISSS 487
Query: 487 GAEPIPVKRFSTSRTL*RAVSSTKSENLLNSFGTKFSSNNDGHKLTLSPMFSISSA 320
+ P STS + VSST +S SS+ + SPM S+ S+
Sbjct: 488 SSASSPQSTLSTSSEVVSEVSSTLLSG--SSAIPSTSSSTPSSSIISSPMTSVLSS 541
Score = 25.4 bits (53), Expect = 8.2
Identities = 29/138 (21%), Positives = 59/138 (42%), Gaps = 6/138 (4%)
Frame = -1
Query: 715 SMYPLICCSSNSPN*TSVDSVNFTISSPVLTTTPVYTVCERPDNLDSITNASASEVGFPN 536
S+ P S++S + +S + S+ +T+ + T + S+ ASA++ +
Sbjct: 944 SVTPTSSSSASSWSSSSEVDPSTAASATGSSTSSIATASVSGSSTSSVATASATDSSTSS 1003
Query: 535 ISPSSVT------IVSAPITISGAEPIPVKRFSTSRTL*RAVSSTKSENLLNSFGTKFSS 374
I+ +SVT + +A +T S + + S T AV+S + + +
Sbjct: 1004 IAAASVTGSSTSSVATASVTDSSTSSVATASATDSSTSSIAVASVTGSSTSSVATASATD 1063
Query: 373 NNDGHKLTLSPMFSISSA 320
++ T S S+SS+
Sbjct: 1064 SSTSSVATASITGSLSSS 1081
>SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 959
Score = 30.3 bits (65), Expect = 0.29
Identities = 20/85 (23%), Positives = 35/85 (41%)
Frame = +3
Query: 279 KAKKIVLASASPRRAELIENIGLKVSLCPSLFEENLVPNEFSKFSDFVEETALHKVLEVE 458
K K S P E++ + L + PSL LV F+ FS+ + ++H + +V
Sbjct: 602 KKSKRESTSNEPTAMEILTEVMLSLLSRPSLLLRKLVDMLFTSFSEDMNRESIHLICDVL 661
Query: 459 KRLTGMGSAPDIVIGADTMVTLDGE 533
K + + + G + GE
Sbjct: 662 KAKESVKDSEGMFAGEEVEEDAFGE 686
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 29.5 bits (63), Expect = 0.50
Identities = 34/127 (26%), Positives = 62/127 (48%)
Frame = -1
Query: 700 ICCSSNSPN*TSVDSVNFTISSPVLTTTPVYTVCERPDNLDSITNASASEVGFPNISPSS 521
+ SS+SP+ S + T++S L+T+ + + + S ++S+S + S SS
Sbjct: 215 VVSSSSSPS----SSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSS-STASSSSSS 269
Query: 520 VTIVSAPITISGAEPIPVKRFSTSRTL*RAVSSTKSENLLNSFGTKFSSNNDGHKLTLSP 341
+I+S+ + S + P STS T+ + SS+ S +S + SS++ TLS
Sbjct: 270 SSIISSSSS-SSSSPT-----STSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSS 323
Query: 340 MFSISSA 320
SS+
Sbjct: 324 SSMSSSS 330
Score = 27.5 bits (58), Expect = 2.0
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 2/135 (1%)
Frame = -1
Query: 691 SSNSPN*TSVDSVNFTISSPVLTTTPVYTVCERPDNLDSITNASASEVGFPNISPSSVTI 512
SS+S TS +I S +++ + + + +++S+S + S SS +
Sbjct: 224 SSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSP 283
Query: 511 VSAPITISGAEPIPVKRFSTSRTL*RAVSSTK--SENLLNSFGTKFSSNNDGHKLTLSPM 338
S TIS + STS T+ + SS+ S L +S + SS + + S +
Sbjct: 284 TSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTI 343
Query: 337 FSISSARRGDALAST 293
S SS+ + +ST
Sbjct: 344 SSSSSSPSSSSFSST 358
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 29.5 bits (63), Expect = 0.50
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 13/159 (8%)
Frame = -1
Query: 691 SSNSPN*TSVDSVNFTISSPVLTTTPVYTVCERPDNLDSITNASASEVG----FPNISPS 524
SS+ + TS + + +ISS V ++TP+ + + +S+++ P+ +PS
Sbjct: 229 SSSLNSTTSATATSSSISSTVSSSTPLTSSNSTTAATSASATSSSAQYNTSSLLPSSTPS 288
Query: 523 SVTIVSA-PITISGAEPIPVKRF------STSRTL*RAVSSTKSENLLNSFGTKFSSNND 365
S + SA T + A P+ S S T +VSS S ++ T SS N
Sbjct: 289 STPLSSANSTTATSASSTPLTSVNSTTTTSASSTPLSSVSSANSTTATSTSSTPLSSVNS 348
Query: 364 GHKLTLS--PMFSISSARRGDALASTIFLAFKTCITGCN 254
+ S P+ S++S A ++ + T T +
Sbjct: 349 TTATSASSTPLTSVNSTTATSASSTPLTSVNSTSATSAS 387
>SPBC28E12.02 ||SPBC9B6.13|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 663
Score = 28.7 bits (61), Expect = 0.88
Identities = 12/40 (30%), Positives = 26/40 (65%)
Frame = -1
Query: 445 TL*RAVSSTKSENLLNSFGTKFSSNNDGHKLTLSPMFSIS 326
T+ + VSS++ ++++S G+ +N G K++ SP+ +S
Sbjct: 410 TIEKGVSSSELSSIVSSTGSIVETNGIGEKMSFSPLKKLS 449
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 28.7 bits (61), Expect = 0.88
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = -1
Query: 691 SSNSPN*TSVDSVNFTISSPVLTTTPVYTVC-ERPDNLDSITNASASEVGFPNISPSSVT 515
SS++ T+ V +T S TTT T C RP+ S T ++ S V S +S+T
Sbjct: 549 SSSNEETTTTTQVTYTTSPEETTTTMTTTTCSSRPEETIS-TVSTTSTVSESGSSSASIT 607
Query: 514 IVSAPITIS 488
T+S
Sbjct: 608 STYPSSTLS 616
Score = 28.3 bits (60), Expect = 1.2
Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 1/144 (0%)
Frame = -1
Query: 691 SSNSPN*TSVDSVNFTISSPVLTTTPVYTVCERPDNLDSITNASASEVGFPNISPSSVTI 512
+S++ + +++ + + SS TTT L S +SAS + S +T
Sbjct: 193 ASSTSSFSTITNTSMIPSSSSFTTTTGSPYYNTSSFLPSSVISSASLSSSSVLPTSIITS 252
Query: 511 VSAPITISGAEPIP-VKRFSTSRTL*RAVSSTKSENLLNSFGTKFSSNNDGHKLTLSPMF 335
S P+T+S + +ST+ T + ++T S + +S F SN+ + S
Sbjct: 253 TSTPVTVSSSSLSSFTPSYSTNLTTTGSTTTTGSATVSSS---PFYSNSS--VIPTSVPS 307
Query: 334 SISSARRGDALASTIFLAFKTCIT 263
S+SS + +T A T +T
Sbjct: 308 SVSSFTSSSSSYTTTLTASNTSVT 331
>SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 358
Score = 27.9 bits (59), Expect = 1.5
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = -1
Query: 700 ICCSSNSPN*TSVDSVNFTIS-SPVLTTTPVYTVCERPDNLDSITNASASEVGFPNISPS 524
I SS++P SV + + +S S + TT+PV T P + ++N++ + S
Sbjct: 91 ISTSSSTPITASVPTSSSILSNSTIPTTSPVPTTSSTPTSSSILSNSTIPSSSSISASTI 150
Query: 523 SVTIVS 506
+ TI+S
Sbjct: 151 TTTIIS 156
>SPBC17D11.03c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 213
Score = 27.5 bits (58), Expect = 2.0
Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = -1
Query: 628 LTTTPVYTVCERPDNLDSITNASASEVGFPNISPS--SVTIVSAPI 497
+ + Y+ C RPD + I + VG P+I P + S+P+
Sbjct: 21 IVSVVAYSACNRPDKISGIAKEAMEHVG-PSIYPKLREALVKSSPL 65
>SPBC21H7.05 |sfc6||transcription factor TFIIIC complex subunit
Sfc6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 582
Score = 27.1 bits (57), Expect = 2.7
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = -1
Query: 490 SGAEPIPVKRFSTSRTL*RAVSSTKSENLLNSFGTKFSSNNDGHKL 353
+G EP +T + + S E L+NS+GT S N G +L
Sbjct: 73 AGNEPKSQNSSTTRGSAKKQSSKGLEEKLINSYGTHVESLNKGRRL 118
>SPAC20H4.06c |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 534
Score = 26.6 bits (56), Expect = 3.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 483 QSPFLSNAFLPPELCEGLSPQ 421
QSPF +N F PP + EG P+
Sbjct: 283 QSPFQNNWFPPPTIPEGWEPK 303
>SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 640
Score = 26.6 bits (56), Expect = 3.5
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = -1
Query: 640 SSPVLTTTPVYTVCERPDNLDSITNASASEVGFPNISPSSVTIVSAPITISGAEPIPVKR 461
+SPV T TP + RP ++ ++++ S+ S V I+S P+ S A P
Sbjct: 315 NSPVDTHTPSTPIMSRPPSMKALSSGVESQDESVASSNFQVPIISNPLFKSPAPYSPTSV 374
Query: 460 FS 455
S
Sbjct: 375 IS 376
>SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 780
Score = 26.6 bits (56), Expect = 3.5
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -2
Query: 492 YLEQSPFLSNAFLPPEL 442
Y QSPF SN+F P EL
Sbjct: 38 YANQSPFSSNSFSPTEL 54
>SPAC23H3.14 |||LAlv9 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 26.6 bits (56), Expect = 3.5
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -1
Query: 631 VLTTTPVYTVCERPDNLDSITNASASEVGFPNI 533
V+TT+P + + DNLD +TNA S+ F N+
Sbjct: 105 VITTSPPFGHIK--DNLDIVTNAYFSQGDFSNL 135
>SPBC947.11c |elg1||DNA replication factor C complex subunit
Elg1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 920
Score = 26.6 bits (56), Expect = 3.5
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = -3
Query: 224 LTSKIELNKELE*TSNVDN*ILLYYQIYLSNNAKKNLPIKFLYTRR 87
L S++ + + SN+ N + + ++S + KKN IKF+ R
Sbjct: 152 LVSELHYSNLADSPSNLRNTVTSMHPFFMSKSVKKNSEIKFVSEER 197
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 26.2 bits (55), Expect = 4.7
Identities = 17/67 (25%), Positives = 30/67 (44%)
Frame = -1
Query: 667 SVDSVNFTISSPVLTTTPVYTVCERPDNLDSITNASASEVGFPNISPSSVTIVSAPITIS 488
S+ +VN ++ + PV + L I + G PN S VT+ +A +
Sbjct: 225 SIPAVNHPMAGQPIAIAPVPAPNQAA--LPPIPPQALPANGTPNTLASPVTLPAANSAVQ 282
Query: 487 GAEPIPV 467
A+P+P+
Sbjct: 283 NAQPVPM 289
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 26.2 bits (55), Expect = 4.7
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Frame = -1
Query: 691 SSNSPN*TSVDSVNFTISSPVLTTTPVYTVCERPDNLDSITNASASEVGFPNISPSSVTI 512
S++S T S + SS ++TP+ + SI+++++S V + S SS +I
Sbjct: 141 STSSSTATPSSSSTTSSSSSSSSSTPISSSIT-----SSISSSASSSVSSSSAS-SSGSI 194
Query: 511 VSAPI-TISGAEPIPVKRFSTSRTL*RAVSSTKSENLLNSFGTKFS 377
SA T+S + + FSTS T + SS+ + N +S T +S
Sbjct: 195 SSADAKTVSASSNSTISGFSTSTT---SASSSAAGNSSSSSYTSYS 237
>SPBC428.07 |meu6||meiotic chromosome segregation protein
Meu6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 651
Score = 26.2 bits (55), Expect = 4.7
Identities = 17/53 (32%), Positives = 22/53 (41%)
Frame = -1
Query: 625 TTTPVYTVCERPDNLDSITNASASEVGFPNISPSSVTIVSAPITISGAEPIPV 467
TTTP + D + T+A AS G N P + +AP S I V
Sbjct: 597 TTTPTPRTAAQEDPAEETTDALASAEGENNQMPQVLETEAAPSIASEGRSITV 649
>SPCC576.15c |ksg1||serine/threonine protein kinase
Ksg1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 592
Score = 26.2 bits (55), Expect = 4.7
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -1
Query: 583 LDSITNASASEVGFPNISPSSVTIVSAPITISGAEPIPVKRFS 455
L++ N S S++ PS+V +S P SGA +KR S
Sbjct: 55 LNTTPNESTSQIDSSPKIPSAVPHISTPNPSSGASTPNIKRVS 97
>SPAC4D7.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 600
Score = 25.8 bits (54), Expect = 6.2
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3
Query: 110 IKFLYTRRQVAMLCELSLKFSKYLRNLDSQFLNLK 6
IKFL RR+V+ L L FS +L + +N+K
Sbjct: 94 IKFLLNRRKVSFLLSFLLLFSLFLLIPNDGRVNIK 128
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 25.4 bits (53), Expect = 8.2
Identities = 29/130 (22%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Frame = -1
Query: 658 SVNFTISSPVLTTTPVYTVCERPDNLDSITNASASEVGFPNISPSSVTIVSAPITISGAE 479
S + ISSP+++++ T P SIT ++ S ++ PSS T S+ + I+
Sbjct: 556 SSSLIISSPIISSSLTATSTSTPALTHSITPSNTSYTS--SLIPSSSTDYSSSL-ITVCS 612
Query: 478 PIPVKRFSTSRTL*RAVSSTKSENLLNSFGTKFSSNNDGHKLTLSPM-FSISSARRGDAL 302
+ + STS L +S+ S+ + ++ ++F T + F+ + A + ++
Sbjct: 613 NVTSEISSTS--LASLISTLTSQQISSNKSSEFVGQTTTEYTTSGSVGFTTTLATQSGSV 670
Query: 301 ASTIFLAFKT 272
T+ + T
Sbjct: 671 PGTVLVDVPT 680
>SPAPJ698.03c |prp12|sap130|U2 snRNP-associated protein Sap130
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1206
Score = 25.4 bits (53), Expect = 8.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 618 VVVKTGEEIVKFTESTDVQFGELDEQQIR 704
VV + E+V F S DV+ G+L+E Q R
Sbjct: 580 VVALSNGELVYFEMSDDVEGGQLNEYQER 608
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,819,574
Number of Sequences: 5004
Number of extensions: 57128
Number of successful extensions: 231
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 229
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 335201398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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