Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31857
(718 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 25 0.94
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 25 0.94
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 25 0.94
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 2.2
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 22 5.0
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 22 6.7
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 22 6.7
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 8.8
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 8.8
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 8.8
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 24.6 bits (51), Expect = 0.94
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 661 DSVNFTISSPVLTTTPVYTVCERPDN 584
D VNF I + + + T CE PDN
Sbjct: 396 DDVNFRIMNANVNELILNTRCENPDN 421
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 24.6 bits (51), Expect = 0.94
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 661 DSVNFTISSPVLTTTPVYTVCERPDN 584
D VNF I + + + T CE PDN
Sbjct: 396 DDVNFRIMNANVNELILNTRCENPDN 421
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 24.6 bits (51), Expect = 0.94
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 661 DSVNFTISSPVLTTTPVYTVCERPDN 584
D VNF I + + + T CE PDN
Sbjct: 396 DDVNFRIMNANVNELILNTRCENPDN 421
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.4 bits (48), Expect = 2.2
Identities = 16/65 (24%), Positives = 30/65 (46%)
Frame = +3
Query: 366 SLFEENLVPNEFSKFSDFVEETALHKVLEVEKRLTGMGSAPDIVIGADTMVTLDGEMFGK 545
SLF + + + ++S +VE T H + + + +P I + A T +L ++
Sbjct: 1330 SLFIKEVDRTDAGEYSCYVENTFGHDTVTHQLIVHAPPHSPQITLTATTTNSLTMKVRPH 1389
Query: 546 PTSEA 560
PT A
Sbjct: 1390 PTDNA 1394
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = -1
Query: 343 PMFSISSARRGDALASTIFLAFKTCITGCNI 251
P ++++ A+ G +TIF+ K C C +
Sbjct: 211 PAYNMTFAQNGPFNTTTIFVPVKPCPWICEL 241
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.8 bits (44), Expect = 6.7
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 609 YTGVVVKTGEEIVKFTESTDVQFGELDEQ 695
YTG V+ T I K + DV++ D+Q
Sbjct: 129 YTGKVLWTPPAIFKSSCEIDVRYFPFDQQ 157
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 21.8 bits (44), Expect = 6.7
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +1
Query: 13 FRNCESKFRKYLENLRLNSHSIATCLLVYKNL 108
FRN K+++ LNS S + KNL
Sbjct: 112 FRNISEKYQEIFNGYFLNSESKDFIDFIQKNL 143
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 8.8
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 585 LSGRSHTVYTGVVVKTGEEIVKFTESTDVQFGELDEQ 695
L ++ Y+G+VV + K + S DV+F D Q
Sbjct: 129 LMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQ 165
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.8
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 609 YTGVVVKTGEEIVKFTESTDVQFGELDEQQ 698
+TG VV I + + DV+F DEQ+
Sbjct: 115 HTGEVVWLSHGIFRSSCDIDVEFFPFDEQR 144
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.4 bits (43), Expect = 8.8
Identities = 17/70 (24%), Positives = 28/70 (40%)
Frame = -1
Query: 700 ICCSSNSPN*TSVDSVNFTISSPVLTTTPVYTVCERPDNLDSITNASASEVGFPNISPSS 521
+C N S S + + L+ TP C R LDS +++ P+S
Sbjct: 535 LCPHRRRANSGSTSSGDDELHRASLSKTPQPPQCPRFRKLDSPSDSGIESGTEKPDKPAS 594
Query: 520 VTIVSAPITI 491
+ SAP ++
Sbjct: 595 SSASSAPTSV 604
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,767
Number of Sequences: 438
Number of extensions: 3633
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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