Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31856
(370 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D31815-1|BAA06602.1| 299|Homo sapiens SMP-30 protein. 66 3e-11
BC073173-1|AAH73173.1| 299|Homo sapiens regucalcin (senescence ... 66 3e-11
BC050371-1|AAH50371.1| 227|Homo sapiens RGN protein protein. 66 3e-11
AL513366-1|CAI41697.1| 299|Homo sapiens regucalcin (senescence ... 66 3e-11
AK223360-1|BAD97080.1| 299|Homo sapiens regucalcin variant prot... 66 3e-11
AB032064-1|BAA84082.1| 299|Homo sapiens regucalcin protein. 66 3e-11
AB028125-1|BAA78693.1| 299|Homo sapiens regucalcin protein. 66 3e-11
U57057-1|AAB47807.1| 525|Homo sapiens WD protein IR10 protein. 30 2.7
BC011690-1|AAH11690.1| 525|Homo sapiens coronin, actin binding ... 30 2.7
BC000010-1|AAH00010.1| 525|Homo sapiens coronin, actin binding ... 30 2.7
AL137073-9|CAI13893.1| 525|Homo sapiens coronin, actin binding ... 30 2.7
BC117241-1|AAI17242.1| 1018|Homo sapiens myosin IG protein. 29 3.5
BC113544-1|AAI13545.1| 1018|Homo sapiens myosin IG protein. 29 3.5
BC026335-1|AAH26335.1| 475|Homo sapiens coronin, actin binding ... 29 3.5
BC015693-1|AAH15693.2| 296|Homo sapiens MYO1G protein protein. 29 3.5
AK131089-1|BAC85139.1| 812|Homo sapiens FLJ00293 protein protein. 29 3.5
AK094025-1|BAC04271.1| 483|Homo sapiens protein ( Homo sapiens ... 29 3.5
AB023142-1|BAA76769.1| 479|Homo sapiens KIAA0925 protein protein. 29 3.5
AB010098-1|BAA36341.1| 475|Homo sapiens ClipinC protein. 29 3.5
Z84814-3|CAB06609.1| 254|Homo sapiens HLA-DRA protein. 28 8.2
X00274-1|CAA25076.1| 229|Homo sapiens HLA-DR alpha heavy chain ... 28 8.2
V00523-1|CAA23782.1| 171|Homo sapiens histocompatibility antige... 28 8.2
M60334-1|AAA59783.1| 254|Homo sapiens cell surface glycoprotein... 28 8.2
K01171-1|AAA59785.1| 254|Homo sapiens HLA-DRA protein. 28 8.2
J00204-1|AAA36302.1| 254|Homo sapiens protein ( Human HLA-DR al... 28 8.2
J00201-1|AAA36301.1| 224|Homo sapiens protein ( human hla-dr an... 28 8.2
J00194-1|AAA36275.1| 254|Homo sapiens protein ( human hla-dr an... 28 8.2
CR457013-1|CAG33294.1| 254|Homo sapiens HLA-DRA protein. 28 8.2
BX120007-2|CAM26203.1| 254|Homo sapiens major histocompatibilit... 28 8.2
BC071659-1|AAH71659.1| 254|Homo sapiens major histocompatibilit... 28 8.2
BC032350-1|AAH32350.1| 254|Homo sapiens major histocompatibilit... 28 8.2
AL935032-5|CAI18476.1| 254|Homo sapiens major histocompatibilit... 28 8.2
AL670296-7|CAI17571.1| 254|Homo sapiens major histocompatibilit... 28 8.2
AL662796-7|CAI18266.1| 254|Homo sapiens major histocompatibilit... 28 8.2
AF522250-1|AAP80750.1| 255|Homo sapiens MHC class II antigen pr... 28 8.2
AB209166-1|BAD92403.1| 231|Homo sapiens major histocompatibilit... 28 8.2
>D31815-1|BAA06602.1| 299|Homo sapiens SMP-30 protein.
Length = 299
Score = 66.5 bits (155), Expect = 3e-11
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Frame = +2
Query: 5 DGNLWVANFDGRQVLKIDPRGGKLLQKIPIPALQVTSVTFGGPDLDQLYVTSASMNRGEE 184
+G LWVA ++G +V+++DP GK LQ + +P + TS FGG + ++YVT A E
Sbjct: 211 EGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARDGMDPE 270
Query: 185 QL---PPCGSTFRLDGLEVKG 238
L P G F++ GL VKG
Sbjct: 271 GLLRQPEAGGIFKITGLGVKG 291
>BC073173-1|AAH73173.1| 299|Homo sapiens regucalcin (senescence
marker protein-30) protein.
Length = 299
Score = 66.5 bits (155), Expect = 3e-11
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Frame = +2
Query: 5 DGNLWVANFDGRQVLKIDPRGGKLLQKIPIPALQVTSVTFGGPDLDQLYVTSASMNRGEE 184
+G LWVA ++G +V+++DP GK LQ + +P + TS FGG + ++YVT A E
Sbjct: 211 EGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARDGMDPE 270
Query: 185 QL---PPCGSTFRLDGLEVKG 238
L P G F++ GL VKG
Sbjct: 271 GLLRQPEAGGIFKITGLGVKG 291
>BC050371-1|AAH50371.1| 227|Homo sapiens RGN protein protein.
Length = 227
Score = 66.5 bits (155), Expect = 3e-11
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Frame = +2
Query: 5 DGNLWVANFDGRQVLKIDPRGGKLLQKIPIPALQVTSVTFGGPDLDQLYVTSASMNRGEE 184
+G LWVA ++G +V+++DP GK LQ + +P + TS FGG + ++YVT A E
Sbjct: 139 EGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARDGMDPE 198
Query: 185 QL---PPCGSTFRLDGLEVKG 238
L P G F++ GL VKG
Sbjct: 199 GLLRQPEAGGIFKITGLGVKG 219
>AL513366-1|CAI41697.1| 299|Homo sapiens regucalcin (senescence
marker protein-30) protein.
Length = 299
Score = 66.5 bits (155), Expect = 3e-11
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Frame = +2
Query: 5 DGNLWVANFDGRQVLKIDPRGGKLLQKIPIPALQVTSVTFGGPDLDQLYVTSASMNRGEE 184
+G LWVA ++G +V+++DP GK LQ + +P + TS FGG + ++YVT A E
Sbjct: 211 EGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARDGMDPE 270
Query: 185 QL---PPCGSTFRLDGLEVKG 238
L P G F++ GL VKG
Sbjct: 271 GLLRQPEAGGIFKITGLGVKG 291
>AK223360-1|BAD97080.1| 299|Homo sapiens regucalcin variant
protein.
Length = 299
Score = 66.5 bits (155), Expect = 3e-11
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Frame = +2
Query: 5 DGNLWVANFDGRQVLKIDPRGGKLLQKIPIPALQVTSVTFGGPDLDQLYVTSASMNRGEE 184
+G LWVA ++G +V+++DP GK LQ + +P + TS FGG + ++YVT A E
Sbjct: 211 EGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARDGMDPE 270
Query: 185 QL---PPCGSTFRLDGLEVKG 238
L P G F++ GL VKG
Sbjct: 271 GLLRQPEAGGIFKITGLGVKG 291
>AB032064-1|BAA84082.1| 299|Homo sapiens regucalcin protein.
Length = 299
Score = 66.5 bits (155), Expect = 3e-11
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Frame = +2
Query: 5 DGNLWVANFDGRQVLKIDPRGGKLLQKIPIPALQVTSVTFGGPDLDQLYVTSASMNRGEE 184
+G LWVA ++G +V+++DP GK LQ + +P + TS FGG + ++YVT A E
Sbjct: 211 EGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARDGMDPE 270
Query: 185 QL---PPCGSTFRLDGLEVKG 238
L P G F++ GL VKG
Sbjct: 271 GLLRQPEAGGIFKITGLGVKG 291
>AB028125-1|BAA78693.1| 299|Homo sapiens regucalcin protein.
Length = 299
Score = 66.5 bits (155), Expect = 3e-11
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Frame = +2
Query: 5 DGNLWVANFDGRQVLKIDPRGGKLLQKIPIPALQVTSVTFGGPDLDQLYVTSASMNRGEE 184
+G LWVA ++G +V+++DP GK LQ + +P + TS FGG + ++YVT A E
Sbjct: 211 EGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARDGMDPE 270
Query: 185 QL---PPCGSTFRLDGLEVKG 238
L P G F++ GL VKG
Sbjct: 271 GLLRQPEAGGIFKITGLGVKG 291
>U57057-1|AAB47807.1| 525|Homo sapiens WD protein IR10 protein.
Length = 525
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +2
Query: 2 TDGNLWVANFDGRQVLKIDPRGGKLLQKIPIPALQVTSVTFGGPDLDQLYVTSAS 166
T+G+L R++ IDPR G +LQ+ + + V F G +L +L T S
Sbjct: 190 TNGSLLATTCKDRKIRVIDPRAGTVLQEASYKGHRASKVLFLG-NLKKLMSTGTS 243
>BC011690-1|AAH11690.1| 525|Homo sapiens coronin, actin binding
protein, 2A protein.
Length = 525
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +2
Query: 2 TDGNLWVANFDGRQVLKIDPRGGKLLQKIPIPALQVTSVTFGGPDLDQLYVTSAS 166
T+G+L R++ IDPR G +LQ+ + + V F G +L +L T S
Sbjct: 190 TNGSLLATTCKDRKIRVIDPRAGTVLQEASYKGHRASKVLFLG-NLKKLMSTGTS 243
>BC000010-1|AAH00010.1| 525|Homo sapiens coronin, actin binding
protein, 2A protein.
Length = 525
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +2
Query: 2 TDGNLWVANFDGRQVLKIDPRGGKLLQKIPIPALQVTSVTFGGPDLDQLYVTSAS 166
T+G+L R++ IDPR G +LQ+ + + V F G +L +L T S
Sbjct: 190 TNGSLLATTCKDRKIRVIDPRAGTVLQEASYKGHRASKVLFLG-NLKKLMSTGTS 243
>AL137073-9|CAI13893.1| 525|Homo sapiens coronin, actin binding
protein, 2A protein.
Length = 525
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +2
Query: 2 TDGNLWVANFDGRQVLKIDPRGGKLLQKIPIPALQVTSVTFGGPDLDQLYVTSAS 166
T+G+L R++ IDPR G +LQ+ + + V F G +L +L T S
Sbjct: 190 TNGSLLATTCKDRKIRVIDPRAGTVLQEASYKGHRASKVLFLG-NLKKLMSTGTS 243
>BC117241-1|AAI17242.1| 1018|Homo sapiens myosin IG protein.
Length = 1018
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +2
Query: 38 RQVLKIDP-RGGKLLQKIPIPALQVTSVTFGGPDLDQLYVTSASMNRGEEQLPPC 199
+ + K+DP R ++++ +P+ A+ SVT GG DQL V A RG++ L C
Sbjct: 894 QHLYKLDPDRQYRVMRAVPLEAVTGLSVTSGG---DQLVVLHA---RGQDDLVVC 942
>BC113544-1|AAI13545.1| 1018|Homo sapiens myosin IG protein.
Length = 1018
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +2
Query: 38 RQVLKIDP-RGGKLLQKIPIPALQVTSVTFGGPDLDQLYVTSASMNRGEEQLPPC 199
+ + K+DP R ++++ +P+ A+ SVT GG DQL V A RG++ L C
Sbjct: 894 QHLYKLDPDRQYRVMRAVPLEAVTGLSVTSGG---DQLVVLHA---RGQDDLVVC 942
>BC026335-1|AAH26335.1| 475|Homo sapiens coronin, actin binding
protein, 2B protein.
Length = 475
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +2
Query: 2 TDGNLWVANFDGRQVLKIDPRGGKLLQKIPIPALQVTSVTFGGPDLDQLYVTSAS 166
TDG+L +++ I+PR G++LQ+ +V V F G ++ +L T S
Sbjct: 185 TDGSLLTTTCKDKKLRVIEPRSGRVLQEANCKNHRVNRVVFLG-NMKRLVTTGVS 238
>BC015693-1|AAH15693.2| 296|Homo sapiens MYO1G protein protein.
Length = 296
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +2
Query: 38 RQVLKIDP-RGGKLLQKIPIPALQVTSVTFGGPDLDQLYVTSASMNRGEEQLPPC 199
+ + K+DP R ++++ +P+ A+ SVT GG DQL V A RG++ L C
Sbjct: 172 QHLYKLDPDRQYRVMRAVPLEAVTGLSVTSGG---DQLVVLHA---RGQDDLVVC 220
>AK131089-1|BAC85139.1| 812|Homo sapiens FLJ00293 protein protein.
Length = 812
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +2
Query: 38 RQVLKIDP-RGGKLLQKIPIPALQVTSVTFGGPDLDQLYVTSASMNRGEEQLPPC 199
+ + K+DP R ++++ +P+ A+ SVT GG DQL V A RG++ L C
Sbjct: 688 QHLYKLDPDRQYRVMRAVPLEAVTGLSVTSGG---DQLVVLHA---RGQDDLVVC 736
>AK094025-1|BAC04271.1| 483|Homo sapiens protein ( Homo sapiens
cDNA FLJ36706 fis, clone UTERU2009483. ).
Length = 483
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +2
Query: 101 LQVTSVTFGGPDLDQLY--VTSASMNRGEEQLPPCGSTF 211
L +S TF GP L +T S+ E+QL PC STF
Sbjct: 255 LTPSSATFPGPLTSPLQGQLTETSVRSYEDQLTPCTSTF 293
>AB023142-1|BAA76769.1| 479|Homo sapiens KIAA0925 protein protein.
Length = 479
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +2
Query: 2 TDGNLWVANFDGRQVLKIDPRGGKLLQKIPIPALQVTSVTFGGPDLDQLYVTSAS 166
TDG+L +++ I+PR G++LQ+ +V V F G ++ +L T S
Sbjct: 189 TDGSLLTTTCKDKKLRVIEPRSGRVLQEANCKNHRVNRVVFLG-NMKRLLTTGVS 242
>AB010098-1|BAA36341.1| 475|Homo sapiens ClipinC protein.
Length = 475
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +2
Query: 2 TDGNLWVANFDGRQVLKIDPRGGKLLQKIPIPALQVTSVTFGGPDLDQLYVTSAS 166
TDG+L +++ I+PR G++LQ+ +V V F G ++ +L T S
Sbjct: 185 TDGSLLTTTCKDKKLRVIEPRSGRVLQEANCKNHRVNRVVFLG-NMKRLLTTGVS 238
>Z84814-3|CAB06609.1| 254|Homo sapiens HLA-DRA protein.
Length = 254
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 234 LTSSPSSLKVEPQGGSCSSPRFIEAEVTYNWSRSGPPNVTDVT 106
LT+SP L+ EP C +F V W R+G P T V+
Sbjct: 117 LTNSPVELR-EPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVS 158
>X00274-1|CAA25076.1| 229|Homo sapiens HLA-DR alpha heavy chain
protein.
Length = 229
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 234 LTSSPSSLKVEPQGGSCSSPRFIEAEVTYNWSRSGPPNVTDVT 106
LT+SP L+ EP C +F V W R+G P T V+
Sbjct: 92 LTNSPVELR-EPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVS 133
>V00523-1|CAA23782.1| 171|Homo sapiens histocompatibility antigen
HLA-DR protein.
Length = 171
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 234 LTSSPSSLKVEPQGGSCSSPRFIEAEVTYNWSRSGPPNVTDVT 106
LT+SP L+ EP C +F V W R+G P T V+
Sbjct: 86 LTNSPVELR-EPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVS 127
>M60334-1|AAA59783.1| 254|Homo sapiens cell surface glycoprotein
protein.
Length = 254
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 234 LTSSPSSLKVEPQGGSCSSPRFIEAEVTYNWSRSGPPNVTDVT 106
LT+SP L+ EP C +F V W R+G P T V+
Sbjct: 117 LTNSPVELR-EPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVS 158
>K01171-1|AAA59785.1| 254|Homo sapiens HLA-DRA protein.
Length = 254
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 234 LTSSPSSLKVEPQGGSCSSPRFIEAEVTYNWSRSGPPNVTDVT 106
LT+SP L+ EP C +F V W R+G P T V+
Sbjct: 117 LTNSPVELR-EPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVS 158
>J00204-1|AAA36302.1| 254|Homo sapiens protein ( Human HLA-DR
alpha-chain (chain-p34) gene, exons 2, 3, 4 and 5. ).
Length = 254
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 234 LTSSPSSLKVEPQGGSCSSPRFIEAEVTYNWSRSGPPNVTDVT 106
LT+SP L+ EP C +F V W R+G P T V+
Sbjct: 117 LTNSPVELR-EPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVS 158
>J00201-1|AAA36301.1| 224|Homo sapiens protein ( human hla-dr
antigen heavy chain gene encoding aa3-229. ).
Length = 224
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 234 LTSSPSSLKVEPQGGSCSSPRFIEAEVTYNWSRSGPPNVTDVT 106
LT+SP L+ EP C +F V W R+G P T V+
Sbjct: 87 LTNSPVELR-EPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVS 128
>J00194-1|AAA36275.1| 254|Homo sapiens protein ( human hla-dr
antigen alpha-chain mrna & ivs fragments. ).
Length = 254
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 234 LTSSPSSLKVEPQGGSCSSPRFIEAEVTYNWSRSGPPNVTDVT 106
LT+SP L+ EP C +F V W R+G P T V+
Sbjct: 117 LTNSPVELR-EPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVS 158
>CR457013-1|CAG33294.1| 254|Homo sapiens HLA-DRA protein.
Length = 254
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 234 LTSSPSSLKVEPQGGSCSSPRFIEAEVTYNWSRSGPPNVTDVT 106
LT+SP L+ EP C +F V W R+G P T V+
Sbjct: 117 LTNSPVELR-EPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVS 158
>BX120007-2|CAM26203.1| 254|Homo sapiens major histocompatibility
complex, class II, DR alpha protein.
Length = 254
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 234 LTSSPSSLKVEPQGGSCSSPRFIEAEVTYNWSRSGPPNVTDVT 106
LT+SP L+ EP C +F V W R+G P T V+
Sbjct: 117 LTNSPVELR-EPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVS 158
>BC071659-1|AAH71659.1| 254|Homo sapiens major histocompatibility
complex, class II, DR alpha protein.
Length = 254
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 234 LTSSPSSLKVEPQGGSCSSPRFIEAEVTYNWSRSGPPNVTDVT 106
LT+SP L+ EP C +F V W R+G P T V+
Sbjct: 117 LTNSPVELR-EPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVS 158
>BC032350-1|AAH32350.1| 254|Homo sapiens major histocompatibility
complex, class II, DR alpha protein.
Length = 254
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 234 LTSSPSSLKVEPQGGSCSSPRFIEAEVTYNWSRSGPPNVTDVT 106
LT+SP L+ EP C +F V W R+G P T V+
Sbjct: 117 LTNSPVELR-EPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVS 158
>AL935032-5|CAI18476.1| 254|Homo sapiens major histocompatibility
complex, class II, DR alpha protein.
Length = 254
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 234 LTSSPSSLKVEPQGGSCSSPRFIEAEVTYNWSRSGPPNVTDVT 106
LT+SP L+ EP C +F V W R+G P T V+
Sbjct: 117 LTNSPVELR-EPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVS 158
>AL670296-7|CAI17571.1| 254|Homo sapiens major histocompatibility
complex, class II, DR alpha protein.
Length = 254
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 234 LTSSPSSLKVEPQGGSCSSPRFIEAEVTYNWSRSGPPNVTDVT 106
LT+SP L+ EP C +F V W R+G P T V+
Sbjct: 117 LTNSPVELR-EPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVS 158
>AL662796-7|CAI18266.1| 254|Homo sapiens major histocompatibility
complex, class II, DR alpha protein.
Length = 254
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 234 LTSSPSSLKVEPQGGSCSSPRFIEAEVTYNWSRSGPPNVTDVT 106
LT+SP L+ EP C +F V W R+G P T V+
Sbjct: 117 LTNSPVELR-EPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVS 158
>AF522250-1|AAP80750.1| 255|Homo sapiens MHC class II antigen
protein.
Length = 255
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 234 LTSSPSSLKVEPQGGSCSSPRFIEAEVTYNWSRSGPPNVTDVT 106
LT+SP L+ EP C +F V W R+G P T V+
Sbjct: 118 LTNSPVELR-EPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVS 159
>AB209166-1|BAD92403.1| 231|Homo sapiens major histocompatibility
complex, class II, DR alpha precursor variant protein.
Length = 231
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 234 LTSSPSSLKVEPQGGSCSSPRFIEAEVTYNWSRSGPPNVTDVT 106
LT+SP L+ EP C +F V W R+G P T V+
Sbjct: 133 LTNSPVELR-EPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVS 174
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,006,289
Number of Sequences: 237096
Number of extensions: 1124984
Number of successful extensions: 9012
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 8884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9010
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2363825726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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