Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31844
         (750 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       25   0.76 
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      24   1.8  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    23   2.3  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    23   2.3  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    23   2.3  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    23   2.3  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   3.1  
AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    23   4.0  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   4.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   5.3  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 25.0 bits (52), Expect = 0.76
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 173 TVNPRGDREDII*CATFTTEVPHAA 99
           T+ P G+R+ ++  ATF  EV H A
Sbjct: 376 TMVPLGERQTLMFSATFPDEVQHLA 400


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = +3

Query: 450 EIASGQLGGVSREPRSGSEEQSTRKS-PPAARVSNENKTES 569
           E+  G  G  +      S+  +     PPA+  SNE++ ES
Sbjct: 246 ELTGGNSGNAAGNNEDSSDSGAAASDRPPASASSNEHEAES 286


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 461 RAAWRSQSRASVRLRRTKHPKIPTS 535
           R  W+ +SR      R++ PKI +S
Sbjct: 60  RETWKERSRDRTERERSREPKIISS 84


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 461 RAAWRSQSRASVRLRRTKHPKIPTS 535
           R  W+ +SR      R++ PKI +S
Sbjct: 60  RETWKERSRDRTERERSREPKIISS 84


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 461 RAAWRSQSRASVRLRRTKHPKIPTS 535
           R  W+ +SR      R++ PKI +S
Sbjct: 60  RETWKERSRDRTERERSREPKIISS 84


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 461 RAAWRSQSRASVRLRRTKHPKIPTS 535
           R  W+ +SR      R++ PKI +S
Sbjct: 60  RETWKERSRDRTERERSREPKIISS 84


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -2

Query: 101 APSPLKPSSVPAGF 60
           A SPL+PS+VP+ F
Sbjct: 692 ASSPLEPSAVPSKF 705


>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +3

Query: 453 IASGQLGGVSREPRSGSEEQSTRKSPP 533
           I SGQL  +S +     EE +    PP
Sbjct: 66  IRSGQLNIISSDHDDSDEEYAANSQPP 92


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 14  TASRQSTPQ*TLLRNRSQPERMTASKAKERRVV 112
           TAS  S+   TL R+  +  RMTA + K   ++
Sbjct: 695 TASLLSSTHSTLARSLMEGPRMTAEQLKRTDII 727


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 22/78 (28%), Positives = 34/78 (43%)
 Frame = +1

Query: 313 NRYFTSPFEPTEDPSNRSWLSIALLGFKKELATSTSTLAEEDLLELRSQAGSLAESVESL 492
           N   T+P  P  D  +   LS A    + E A     L+ EDL+   +  GS  +S+ +L
Sbjct: 683 NASATTP-PPQVDEVDDKELSGAEEEKEVEKALLKPLLSLEDLVRFSTLEGSGGDSLRTL 741

Query: 493 GPAPKNKAPENPHQQHAS 546
               +    E P  +HA+
Sbjct: 742 LQRGQETGAEWPGLEHAN 759


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,562
Number of Sequences: 438
Number of extensions: 4483
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)