Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31841
(483 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0240 + 15958110-15958305,15959586-15960763 38 0.003
08_02_0996 - 23404595-23405596 32 0.28
08_02_0997 + 23409932-23410894 31 0.37
09_04_0421 + 17417851-17418840 31 0.48
09_04_0412 + 17369935-17370873 31 0.64
09_04_0411 + 17366559-17367497 31 0.64
05_01_0327 - 2565574-2565654,2566037-2566099,2566511-2566591,256... 31 0.64
02_05_0955 - 33056171-33057256 31 0.64
01_01_0379 - 2956396-2957409 30 1.1
11_02_0136 + 8698577-8699400,8699525-8700360,8700520-8701679 29 1.5
07_01_0447 - 3377666-3378673 29 1.5
04_04_0052 + 22386553-22387506 29 1.5
03_06_0249 + 32638112-32639140 29 1.5
01_01_0378 - 2953514-2954341,2954388-2954504 29 1.5
09_04_0417 + 17404433-17405392 29 2.0
07_03_1465 - 26729872-26730909 29 2.0
07_01_0448 - 3383706-3384761 29 2.0
07_01_0446 - 3371829-3372132,3374691-3375673 29 2.0
05_03_0510 + 14864430-14864792,14865234-14865485,14865573-148656... 29 2.0
03_02_0423 + 8321076-8322164 29 2.0
11_06_0388 + 23048576-23051546,23051830-23052371,23052444-230525... 29 2.6
01_01_0370 + 2895685-2895717,2895892-2896944 29 2.6
07_03_1467 - 26736859-26736868,26737769-26738439 28 3.4
07_03_0776 + 21417476-21417691,21417775-21417855,21417941-214183... 28 3.4
09_04_0410 + 17362751-17363698 28 4.5
06_01_0782 - 5848381-5849394,5851143-5851255,5851337-5851440,585... 28 4.5
06_01_0780 + 5824367-5825335 28 4.5
04_04_1166 - 31427523-31428154,31428888-31429020 28 4.5
12_02_0105 + 13647356-13648534 27 6.0
11_02_0018 - 7412309-7413328 27 6.0
07_01_0449 - 3392512-3393504 27 6.0
07_01_0445 - 3365244-3366227 27 6.0
07_01_0233 - 1703602-1705623 27 6.0
02_05_1249 - 35240823-35242184 27 6.0
02_04_0288 + 21607289-21608251 27 6.0
01_05_0810 - 25435193-25435323,25435434-25436360,25436459-254369... 27 6.0
12_02_0885 + 23994354-23994584,23994987-23995342,23995549-239956... 27 7.9
11_02_0016 - 7380933-7382027 27 7.9
07_03_1555 - 27669981-27670148,27670232-27670315,27670349-276703... 27 7.9
07_03_1206 + 24878301-24879308 27 7.9
06_01_1118 - 9213785-9215051,9215811-9215992,9216075-9216611,921... 27 7.9
02_02_0574 - 11701359-11701460,11701469-11701570,11701725-117019... 27 7.9
>09_04_0240 + 15958110-15958305,15959586-15960763
Length = 457
Score = 38.3 bits (85), Expect = 0.003
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Frame = +2
Query: 230 PPLGSLRFKAPQSPE-PWDGIRDATAEGNVCAQIDPVFAKSYVGDENCLFLNVYTP---- 394
P S RF AP+ W RD T GN A D V + DE + + V+ P
Sbjct: 52 PKAHSDRFGAPERVGGSWCATRDKTRSGNGVATKDVV-----IDDETGVSVRVFLPVDAA 106
Query: 395 ---STDGAFLPVMIWIHGGGFKWGSGNTNLY 478
+ G LP+++++HGG F GS + ++
Sbjct: 107 AAAAAAGRRLPLVVYVHGGAFCTGSASARMF 137
>08_02_0996 - 23404595-23405596
Length = 333
Score = 31.9 bits (69), Expect = 0.28
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 335 VFAKSYVGDENC-LFLNVYTPSTDGAFLPVMIWIHGGGF 448
V +K V D + L + +Y P G LPV+I+ HGG F
Sbjct: 71 VVSKDVVVDRSTGLAVRLYRPKHRGGRLPVLIYFHGGAF 109
>08_02_0997 + 23409932-23410894
Length = 320
Score = 31.5 bits (68), Expect = 0.37
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +2
Query: 371 LFLNVYTPSTDGA---FLPVMIWIHGGGFKWGS 460
L+ +Y P DG LPV++++HGGG GS
Sbjct: 56 LWARLYLPDLDGGERKLLPVVVYLHGGGLVVGS 88
>09_04_0421 + 17417851-17418840
Length = 329
Score = 31.1 bits (67), Expect = 0.48
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 4/30 (13%)
Frame = +2
Query: 383 VYTPSTD----GAFLPVMIWIHGGGFKWGS 460
+Y PST G LPV+++ HGGGF GS
Sbjct: 65 IYLPSTPASGYGRRLPVLVFFHGGGFCLGS 94
>09_04_0412 + 17369935-17370873
Length = 312
Score = 30.7 bits (66), Expect = 0.64
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Frame = +2
Query: 335 VFAKSYVGDENC-LFLNVYTPSTD----GAFLPVMIWIHGGGFKWGSGNTNLY 478
V +K V D LF+ V+ P G LPV+++ HGGGF S ++ Y
Sbjct: 42 VVSKDVVLDAGTGLFVRVFLPKVQDQELGKKLPVLVYFHGGGFIIESADSATY 94
>09_04_0411 + 17366559-17367497
Length = 312
Score = 30.7 bits (66), Expect = 0.64
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Frame = +2
Query: 335 VFAKSYVGDENC-LFLNVYTPSTD----GAFLPVMIWIHGGGFKWGSGNTNLY 478
V +K V D LF+ V+ P G LPV+++ HGGGF S ++ Y
Sbjct: 42 VVSKDVVLDAGTGLFVRVFLPKVQDQETGKKLPVLVYFHGGGFIIESADSATY 94
>05_01_0327 -
2565574-2565654,2566037-2566099,2566511-2566591,
2566710-2566787,2566892-2566984,2567108-2567225,
2567568-2567695,2567808-2568083,2568763-2568917,
2568997-2569140,2569427-2569844
Length = 544
Score = 30.7 bits (66), Expect = 0.64
Identities = 22/78 (28%), Positives = 31/78 (39%)
Frame = +3
Query: 162 RDGS*TARPGRPSTVSKEYHMRNPHWVLCDLRPHNLQNPGTASGMPRRKGTCVLKSIQSS 341
RDG A PG S S E +N NL + G P +K + ++
Sbjct: 26 RDGGVAASPGSQSAASTERRKKNRG------SKRNLSDGSGEDGRPGKKINLEEEELEEE 79
Query: 342 RNPMSAMKTACS*TCTPL 395
R P+ +ACS +PL
Sbjct: 80 RMPLEDEASACSSCSSPL 97
>02_05_0955 - 33056171-33057256
Length = 361
Score = 30.7 bits (66), Expect = 0.64
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 401 DGAFLPVMIWIHGGGFKWGSGNTNLY 478
DG LP+++++HGG F GS + ++
Sbjct: 86 DGRRLPLVVYVHGGAFCTGSASARMF 111
>01_01_0379 - 2956396-2957409
Length = 337
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +2
Query: 371 LFLNVYTPST--DGAFLPVMIWIHGGGFKWGS 460
L L VY P T D LPV++ HGGG+ G+
Sbjct: 64 LKLRVYRPPTAGDAERLPVLVCFHGGGYCLGT 95
>11_02_0136 + 8698577-8699400,8699525-8700360,8700520-8701679
Length = 939
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 212 GIPYAKPPLGSLRFKAPQSPEPWDGIRDATAEGN-VCAQIDPVFAKSY 352
G+P A + SL PQ+ E W+ RD+ E + + ++ + + SY
Sbjct: 382 GLPLAIITMASLLVNKPQTKEQWEKYRDSIVENDPIVNRMQKILSLSY 429
>07_01_0447 - 3377666-3378673
Length = 335
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = +2
Query: 332 PVFAKSYVGDENC-LFLNVYTPSTDGAF---LPVMIWIHGGGF 448
PV K V D L L +Y P+ G LPV+++ HGGGF
Sbjct: 49 PVQWKDVVYDAGRGLRLRMYAPANHGGEEGKLPVLVYFHGGGF 91
>04_04_0052 + 22386553-22387506
Length = 317
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 404 GAFLPVMIWIHGGGFKWGSGNTNLY 478
G LPV+++ HGGGF GS + Y
Sbjct: 73 GERLPVVVYFHGGGFVIGSAASPAY 97
>03_06_0249 + 32638112-32639140
Length = 342
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +2
Query: 371 LFLNVYTP---STDGAFLPVMIWIHGGGFKWGS 460
L L VY P + G LPV+++ HGGG+ GS
Sbjct: 60 LKLRVYRPPAATVAGEKLPVLVYFHGGGYFIGS 92
>01_01_0378 - 2953514-2954341,2954388-2954504
Length = 314
Score = 29.5 bits (63), Expect = 1.5
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 12/80 (15%)
Frame = +2
Query: 257 APQSPEPWDGIRDATAEGNVCAQIDPVFAKSY---VGDE-NCLFLNVYTPST-------- 400
AP E + G+ ++G+V + V S+ V D + L + VYT T
Sbjct: 9 APHVVEDFYGVVKLLSDGSVVRGDESVLIPSWKDVVYDATHGLRVRVYTSRTAAAAAAGD 68
Query: 401 DGAFLPVMIWIHGGGFKWGS 460
DG LPV+++ HGGG+ G+
Sbjct: 69 DGGKLPVLVYFHGGGYCIGA 88
>09_04_0417 + 17404433-17405392
Length = 319
Score = 29.1 bits (62), Expect = 2.0
Identities = 20/76 (26%), Positives = 31/76 (40%)
Frame = +2
Query: 251 FKAPQSPEPWDGIRDATAEGNVCAQIDPVFAKSYVGDENCLFLNVYTPSTDGAFLPVMIW 430
F +P +DG T++ V V A+ Y+ D L P LP++++
Sbjct: 27 FGTETTPAGFDGATGVTSKDVVIDDATGVSARLYIPD-----LPASGPGHHRKKLPIVVY 81
Query: 431 IHGGGFKWGSGNTNLY 478
HGGG S + Y
Sbjct: 82 FHGGGMVLDSAASPTY 97
>07_03_1465 - 26729872-26730909
Length = 345
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Frame = +2
Query: 371 LFLNVYTPSTDGAF--LPVMIWIHGGGF 448
L+ V+ P T+ A LPV+++ HGGGF
Sbjct: 74 LWARVFCPPTNTAAVKLPVVVYFHGGGF 101
>07_01_0448 - 3383706-3384761
Length = 351
Score = 29.1 bits (62), Expect = 2.0
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 404 GAFLPVMIWIHGGGFKWGS 460
G LPV+++ HGGGF GS
Sbjct: 88 GGKLPVLVYFHGGGFCLGS 106
>07_01_0446 - 3371829-3372132,3374691-3375673
Length = 428
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +2
Query: 371 LFLNVYTPSTDGAF---LPVMIWIHGGGFKWGS 460
L + +Y P+ G LPV+++ HGGGF GS
Sbjct: 64 LGVRMYRPAATGGAEEKLPVVVYFHGGGFCIGS 96
>05_03_0510 +
14864430-14864792,14865234-14865485,14865573-14865671,
14865789-14866082,14866630-14867010
Length = 462
Score = 29.1 bits (62), Expect = 2.0
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 9/72 (12%)
Frame = +2
Query: 2 KHLCNELNK---ILINNSGVNNEF---PTMISAVNEFL---DDLRGGRMSESPLVTVEQG 154
K LC EL I++ G+N P + V F+ D L+G RM +SP+ ++
Sbjct: 115 KELCEELRVSGGIILAPEGINGSICGTPEAVEKVLNFIQSDDRLKGLRMIQSPVTPEDEA 174
Query: 155 QLQGRIVNSPSG 190
G SP G
Sbjct: 175 IHHGHTSQSPVG 186
>03_02_0423 + 8321076-8322164
Length = 362
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +2
Query: 335 VFAKSYVGDENC-LFLNVYTPSTDGAF--LPVMIWIHGGGFKWGSGNTNLY 478
V A+ V D ++ +Y P+ A +PV+++ HGGGF GS + Y
Sbjct: 73 VIARDAVVDRATRVWARLYAPAAAAAAGRVPVVVYFHGGGFCVGSAAWSCY 123
>11_06_0388 + 23048576-23051546,23051830-23052371,23052444-23052517,
23053006-23053090,23053281-23053367,23053585-23053657,
23053882-23053925,23054041-23054169,23054301-23054402,
23054529-23054585
Length = 1387
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -3
Query: 367 VFIADIGFREDW-IDLSTHVPFRRGIPDAVPGFWRLWGLKSQRTQ 236
V + + F+E+ + + R P+A PG WR+W +RT+
Sbjct: 1052 VILGMVSFQEEQSFEPQGMIKVERVEPNAAPGGWRIWPFSFKRTR 1096
>01_01_0370 + 2895685-2895717,2895892-2896944
Length = 361
Score = 28.7 bits (61), Expect = 2.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 401 DGAFLPVMIWIHGGGFKWGS 460
DG LPV+++ HGGG+ G+
Sbjct: 98 DGGKLPVLVYFHGGGYCIGA 117
>07_03_1467 - 26736859-26736868,26737769-26738439
Length = 226
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 4/30 (13%)
Frame = +2
Query: 371 LFLNVYTPSTDGAF----LPVMIWIHGGGF 448
L+ V++P++ A LPV+++ HGGGF
Sbjct: 83 LWARVFSPASSSAVESPPLPVVVYFHGGGF 112
>07_03_0776 +
21417476-21417691,21417775-21417855,21417941-21418342,
21418457-21418621,21418729-21419460,21419542-21419748
Length = 600
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 257 APQSPEPWDGIRDATAEGNVCAQIDPVFAK 346
AP+ P P+DG D + G + ID VF K
Sbjct: 565 APEPPYPFDGETDMSVGGGLAELIDWVFDK 594
>09_04_0410 + 17362751-17363698
Length = 315
Score = 27.9 bits (59), Expect = 4.5
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 413 LPVMIWIHGGGFKWGSGNTNLY 478
LPV+++ HGGGF S +++ Y
Sbjct: 74 LPVLVFFHGGGFLIESADSSTY 95
>06_01_0782 -
5848381-5849394,5851143-5851255,5851337-5851440,
5851584-5851660,5851740-5852132,5852267-5852482,
5852826-5852923,5853503-5853637,5853745-5853811,
5853999-5854094,5854555-5854683
Length = 813
Score = 27.9 bits (59), Expect = 4.5
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 413 LPVMIWIHGGGFKWGS 460
LPV+++ HGGGF GS
Sbjct: 563 LPVVVYFHGGGFVTGS 578
>06_01_0780 + 5824367-5825335
Length = 322
Score = 27.9 bits (59), Expect = 4.5
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 371 LFLNVYTPST--DGAFLPVMIWIHGGGFKWGSGNTNLY 478
L + +Y P G LP++++ HGGGF S + Y
Sbjct: 59 LSVRLYLPPAVAAGERLPILVYFHGGGFMVESATSPTY 96
>04_04_1166 - 31427523-31428154,31428888-31429020
Length = 254
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -1
Query: 348 DFAKTGSI*AHTFPSAVASLMPSQGSGDCGALNRKEPNGG 229
DFA G HT P A L QG+ G + +P GG
Sbjct: 105 DFAPNGQNPPHTHPRATEILTVLQGTLLVGFVTSNQPGGG 144
>12_02_0105 + 13647356-13648534
Length = 392
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +2
Query: 188 GKAFYSFQGIPYAKPPLGSLRFKAPQ---SPEPWDGIRDATAEGNVCAQI 328
G AF + IP P+GSL +KAP+ +D D A G + AQ+
Sbjct: 210 GMAFAMEESIPPYSNPVGSLPYKAPELLLRSSIYDETIDMWALGCIMAQL 259
>11_02_0018 - 7412309-7413328
Length = 339
Score = 27.5 bits (58), Expect = 6.0
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 413 LPVMIWIHGGGFKWGSGNTNLY 478
LPV+++ HGGGF + S + Y
Sbjct: 84 LPVVVFFHGGGFAYLSAASRAY 105
>07_01_0449 - 3392512-3393504
Length = 330
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +2
Query: 371 LFLNVYTP-STDGAFLPVMIWIHGGGFKWGS 460
L + +Y P G LPV + HGGGF GS
Sbjct: 54 LGVRLYRPRERGGGRLPVFFYYHGGGFCIGS 84
>07_01_0445 - 3365244-3366227
Length = 327
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 395 STDGAFLPVMIWIHGGGFKWGSG 463
+ + A +PV+ + HGGGF GSG
Sbjct: 70 AANDARVPVVAYFHGGGFCIGSG 92
>07_01_0233 - 1703602-1705623
Length = 673
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 281 DGIRDATAEGNVCAQIDPVFAKSYVGDENCLFLNV 385
D + D EG++ +DP Y DE CL L +
Sbjct: 574 DWVMDCWNEGSLLETMDPKLQNEYDADEACLALKL 608
>02_05_1249 - 35240823-35242184
Length = 453
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = -1
Query: 285 PSQGSGDCGALNRKE-PNGGFAYGIPWKL*KAFPDGLFT--IRPWSCPCSTVTRGDSDIL 115
P +GS + A+ P G A G+ A D F ++ W+ C + GD D +
Sbjct: 137 PEEGSSELAAVQVTVFPGKGLAVGVSIHH-VACDDSSFMHFVKTWAANCRVASGGDVDAV 195
Query: 114 PP 109
PP
Sbjct: 196 PP 197
>02_04_0288 + 21607289-21608251
Length = 320
Score = 27.5 bits (58), Expect = 6.0
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +2
Query: 392 PSTDGAFLPVMIWIHGGGF 448
P+ LPV++++HGGGF
Sbjct: 67 PAAAAERLPVVVYVHGGGF 85
>01_05_0810 -
25435193-25435323,25435434-25436360,25436459-25436987,
25437089-25437190
Length = 562
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -3
Query: 280 PGFWRLWGLKSQRTQWGFRIWYSLETVEGLPGRAVYDPSLELP 152
PG W L T WG ++ + +E G P +V P +LP
Sbjct: 519 PGVWFLHCHLEVHTSWGLKMAFLVEDGSG-PDESVLPPPKDLP 560
>12_02_0885 +
23994354-23994584,23994987-23995342,23995549-23995663,
23995918-23995962,23996151-23996333,23996802-23996978,
23997345-23997476,23997587-23997766,23999116-23999247,
24000212-24000280,24000377-24000490,24000579-24000806,
24001343-24001486
Length = 701
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/62 (22%), Positives = 29/62 (46%)
Frame = +2
Query: 2 KHLCNELNKILINNSGVNNEFPTMISAVNEFLDDLRGGRMSESPLVTVEQGQLQGRIVNS 181
K CN+L +L++ + + A + F D+L ++E +V+ ++ + I
Sbjct: 529 KMCCNDLQLVLLDEEPDHQYGSRRMPARSRFGDELEAEALAERRIVSAKKSSMGRNIPRK 588
Query: 182 PS 187
PS
Sbjct: 589 PS 590
>11_02_0016 - 7380933-7382027
Length = 364
Score = 27.1 bits (57), Expect = 7.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 413 LPVMIWIHGGGFKWGSGNTNLY 478
LPV+++ HGGGF + S + Y
Sbjct: 89 LPVVVFFHGGGFAFLSAASRAY 110
>07_03_1555 -
27669981-27670148,27670232-27670315,27670349-27670360,
27670683-27670761,27670840-27671078,27671167-27671260,
27671342-27671484,27671688-27671786,27671870-27671998,
27672123-27672197,27672308-27672520,27672581-27672676,
27673282-27673380,27673600-27673839,27674212-27674322,
27674429-27674626,27674720-27674835,27675076-27675193,
27675761-27675866,27675972-27676030,27676259-27676388,
27676730-27676887,27677672-27677887,27677972-27678082,
27678313-27678472,27679364-27679509,27679603-27679695,
27680610-27680706,27681224-27681294,27681407-27681505,
27682037-27682168,27682287-27682729,27683252-27683564,
27684301-27684549
Length = 1631
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -1
Query: 303 AVASLMPSQGSGDCGALNRKEPNGGFAYGIPWKL 202
A+ +L + G CGA N G GIPW L
Sbjct: 117 ALVALGCMEHRGGCGADNDSGDGSGLMSGIPWDL 150
>07_03_1206 + 24878301-24879308
Length = 335
Score = 27.1 bits (57), Expect = 7.9
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 404 GAFLPVMIWIHGGGFKWGS 460
G LPV+++ HGGGF + S
Sbjct: 88 GDHLPVVVYFHGGGFVFHS 106
>06_01_1118 -
9213785-9215051,9215811-9215992,9216075-9216611,
9216742-9217224
Length = 822
Score = 27.1 bits (57), Expect = 7.9
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +2
Query: 221 YAKPPLGSLRFK-APQSPE--PWDGIRDATA-EGNVCAQIDPVFAKSYVGDENCLFLNVY 388
Y KP LG ++++ P S + D R ++ G A I A++++ CL V
Sbjct: 104 YGKPDLGFVQWRWRPDSCDLPRLDPARFLSSMRGKTLAFIGDSLARNHMNSLICLLTRVA 163
Query: 389 TPSTDGAFLPVMIWIHGGGFKW 454
P+T ++ +GGG+ +
Sbjct: 164 EPTTSWPSSEHTVYHYGGGYNF 185
>02_02_0574 -
11701359-11701460,11701469-11701570,11701725-11701922,
11702090-11704052,11705312-11706126
Length = 1059
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +2
Query: 185 SGKAFYSFQGIPYAKPPLGSLRFKAPQSPEPWDGIRDATAEG 310
S K +G+P A +GSL PQ+ WD + + G
Sbjct: 357 SEKTLRKCEGVPLAIITIGSLLAMRPQNLYQWDRVHNLIGSG 398
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,797,044
Number of Sequences: 37544
Number of extensions: 436663
Number of successful extensions: 1306
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1305
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 987904180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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