Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31836
         (411 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2641|AAN10914.1| 1931|Drosophila melanogaster CG18109-P...    28   4.2  
AE013599-1510|AAM68695.1|  555|Drosophila melanogaster CG8819-PC...    28   4.2  
AE013599-1507|AAO41402.1|  524|Drosophila melanogaster CG8821-PB...    28   4.2  
X07134-1|CAA30146.1|  349|Drosophila melanogaster protein ( D. m...    27   7.3  
X07133-1|CAA30145.1|  304|Drosophila melanogaster protein ( D. m...    27   7.3  
X07132-1|CAA30144.1|  643|Drosophila melanogaster protein ( D. m...    27   7.3  
X07131-1|CAA30143.1|  616|Drosophila melanogaster protein ( D. m...    27   7.3  
X06742-1|CAA29917.1|  656|Drosophila melanogaster Shaker protein.      27   7.3  
X06184-1|CAA29549.1|  304|Drosophila melanogaster protein ( Dros...    27   7.3  
M17211-1|AAA28417.1|  616|Drosophila melanogaster protein ( D.me...    27   7.3  
AY118398-1|AAM48427.1|  571|Drosophila melanogaster RE58855p pro...    27   7.3  
AE014298-2648|AAS65396.1|  349|Drosophila melanogaster CG12348-P...    27   7.3  
AE014298-2647|AAN09452.1|  304|Drosophila melanogaster CG12348-P...    27   7.3  
AE014298-2646|AAF48786.3|  655|Drosophila melanogaster CG12348-P...    27   7.3  
AE014298-2645|AAF48790.2|  643|Drosophila melanogaster CG12348-P...    27   7.3  
AE014298-2644|AAS65395.1|  616|Drosophila melanogaster CG12348-P...    27   7.3  
AE014298-2643|AAF48785.3|  616|Drosophila melanogaster CG12348-P...    27   7.3  
AE014298-2642|AAN09451.1|  571|Drosophila melanogaster CG12348-P...    27   7.3  
AE014134-1292|AAF52524.2| 1983|Drosophila melanogaster CG6630-PA...    27   9.7  

>AE014134-2641|AAN10914.1| 1931|Drosophila melanogaster CG18109-PA
           protein.
          Length = 1931

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = -1

Query: 258 PTLRTETHYCFTAEIGGVVVPTRADSQEVLPPVTS*IYELVFCCD 124
           PT     H C   + G +V     D  E L P++  I E   CCD
Sbjct: 856 PTCSHINHICKDNKSGQMVCADEVDKSEDLSPLSLRIDEYTECCD 900


>AE013599-1510|AAM68695.1|  555|Drosophila melanogaster CG8819-PC,
           isoform C protein.
          Length = 555

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -1

Query: 249 RTETHYCFTAEIGGVVVPTRADSQE 175
           + ET YC+    GG+VV  R++ +E
Sbjct: 363 KQETMYCYKDSYGGIVVSPRSEGEE 387


>AE013599-1507|AAO41402.1|  524|Drosophila melanogaster CG8821-PB,
           isoform B protein.
          Length = 524

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -1

Query: 249 RTETHYCFTAEIGGVVVPTRADSQE 175
           + ET YC+    GG+VV  R++ +E
Sbjct: 332 KQETMYCYKDSYGGIVVSPRSEGEE 356


>X07134-1|CAA30146.1|  349|Drosophila melanogaster protein ( D.
           melanogaster larvalShaker ShE mRNA for put.
           K(+)-channel. ).
          Length = 349

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = -1

Query: 141 LVFCCDGTFPEFRHYKMY 88
           ++FC + T PEF+HYK++
Sbjct: 242 VIFCLE-TLPEFKHYKVF 258


>X07133-1|CAA30145.1|  304|Drosophila melanogaster protein ( D.
           melanogaster larvalShaker mRNA for put. K(+)-channel. ).
          Length = 304

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = -1

Query: 141 LVFCCDGTFPEFRHYKMY 88
           ++FC + T PEF+HYK++
Sbjct: 197 VIFCLE-TLPEFKHYKVF 213


>X07132-1|CAA30144.1|  643|Drosophila melanogaster protein ( D.
           melanogaster (latepopul.) Shaker ShB mRNA for put.
           K(+)-channel.).
          Length = 643

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = -1

Query: 141 LVFCCDGTFPEFRHYKMY 88
           ++FC + T PEF+HYK++
Sbjct: 230 VIFCLE-TLPEFKHYKVF 246


>X07131-1|CAA30143.1|  616|Drosophila melanogaster protein ( D.
           melanogaster adultShaker ShA mRNA for put. K(+)-channel.
           ).
          Length = 616

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = -1

Query: 141 LVFCCDGTFPEFRHYKMY 88
           ++FC + T PEF+HYK++
Sbjct: 242 VIFCLE-TLPEFKHYKVF 258


>X06742-1|CAA29917.1|  656|Drosophila melanogaster Shaker protein.
          Length = 656

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = -1

Query: 141 LVFCCDGTFPEFRHYKMY 88
           ++FC + T PEF+HYK++
Sbjct: 242 VIFCLE-TLPEFKHYKVF 258


>X06184-1|CAA29549.1|  304|Drosophila melanogaster protein (
           Drosophila mRNA forShaker (Sh) protein. ).
          Length = 304

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = -1

Query: 141 LVFCCDGTFPEFRHYKMY 88
           ++FC + T PEF+HYK++
Sbjct: 197 VIFCLE-TLPEFKHYKVF 213


>M17211-1|AAA28417.1|  616|Drosophila melanogaster protein (
           D.melanogaster potassiumchannel (Shaker) mRNA, complete
           cds. ).
          Length = 616

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = -1

Query: 141 LVFCCDGTFPEFRHYKMY 88
           ++FC + T PEF+HYK++
Sbjct: 242 VIFCLE-TLPEFKHYKVF 258


>AY118398-1|AAM48427.1|  571|Drosophila melanogaster RE58855p
           protein.
          Length = 571

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = -1

Query: 141 LVFCCDGTFPEFRHYKMY 88
           ++FC + T PEF+HYK++
Sbjct: 197 VIFCLE-TLPEFKHYKVF 213


>AE014298-2648|AAS65396.1|  349|Drosophila melanogaster CG12348-PF,
           isoform F protein.
          Length = 349

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = -1

Query: 141 LVFCCDGTFPEFRHYKMY 88
           ++FC + T PEF+HYK++
Sbjct: 242 VIFCLE-TLPEFKHYKVF 258


>AE014298-2647|AAN09452.1|  304|Drosophila melanogaster CG12348-PA,
           isoform A protein.
          Length = 304

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = -1

Query: 141 LVFCCDGTFPEFRHYKMY 88
           ++FC + T PEF+HYK++
Sbjct: 197 VIFCLE-TLPEFKHYKVF 213


>AE014298-2646|AAF48786.3|  655|Drosophila melanogaster CG12348-PE,
           isoform E protein.
          Length = 655

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = -1

Query: 141 LVFCCDGTFPEFRHYKMY 88
           ++FC + T PEF+HYK++
Sbjct: 242 VIFCLE-TLPEFKHYKVF 258


>AE014298-2645|AAF48790.2|  643|Drosophila melanogaster CG12348-PC,
           isoform C protein.
          Length = 643

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = -1

Query: 141 LVFCCDGTFPEFRHYKMY 88
           ++FC + T PEF+HYK++
Sbjct: 230 VIFCLE-TLPEFKHYKVF 246


>AE014298-2644|AAS65395.1|  616|Drosophila melanogaster CG12348-PG,
           isoform G protein.
          Length = 616

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = -1

Query: 141 LVFCCDGTFPEFRHYKMY 88
           ++FC + T PEF+HYK++
Sbjct: 242 VIFCLE-TLPEFKHYKVF 258


>AE014298-2643|AAF48785.3|  616|Drosophila melanogaster CG12348-PB,
           isoform B protein.
          Length = 616

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = -1

Query: 141 LVFCCDGTFPEFRHYKMY 88
           ++FC + T PEF+HYK++
Sbjct: 242 VIFCLE-TLPEFKHYKVF 258


>AE014298-2642|AAN09451.1|  571|Drosophila melanogaster CG12348-PD,
           isoform D protein.
          Length = 571

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = -1

Query: 141 LVFCCDGTFPEFRHYKMY 88
           ++FC + T PEF+HYK++
Sbjct: 197 VIFCLE-TLPEFKHYKVF 213


>AE014134-1292|AAF52524.2| 1983|Drosophila melanogaster CG6630-PA
            protein.
          Length = 1983

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 252  GWGSRCNYTETLEFIS 299
            GW   CN +ETL+F+S
Sbjct: 1478 GWWQNCNESETLQFLS 1493


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,799,296
Number of Sequences: 53049
Number of extensions: 390812
Number of successful extensions: 836
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1209331668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)