Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31824
(670 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 207 8e-56
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 206 2e-55
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 206 2e-55
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 206 2e-55
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 23 3.5
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 22 4.6
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 8.0
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 8.0
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 207 bits (505), Expect = 8e-56
Identities = 95/105 (90%), Positives = 100/105 (95%)
Frame = +3
Query: 51 KRLTLTLSSSGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 230
+++ + + GHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL
Sbjct: 4 EKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 63
Query: 231 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 365
KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ
Sbjct: 64 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 108
Score = 206 bits (502), Expect = 2e-55
Identities = 97/102 (95%), Positives = 98/102 (96%)
Frame = +2
Query: 365 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFE 544
ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFE
Sbjct: 109 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFE 168
Query: 545 EIKXEVSSYIKKIGYNPXAVAFVPISGWHGDNMLEPSTKMPW 670
EIK EVSSYIKKIGYNP AVAFVPISGWHGDNMLE S+KMPW
Sbjct: 169 EIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPW 210
Score = 24.6 bits (51), Expect = 0.86
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2
Query: 47 REKTHINIVVIG 82
+EK HINIVVIG
Sbjct: 3 KEKIHINIVVIG 14
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 206 bits (502), Expect = 2e-55
Identities = 94/105 (89%), Positives = 100/105 (95%)
Frame = +3
Query: 51 KRLTLTLSSSGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 230
+++ + + GHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL
Sbjct: 4 EKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 63
Query: 231 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 365
KAERERGITIDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQ
Sbjct: 64 KAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQ 108
Score = 196 bits (478), Expect = 2e-52
Identities = 92/102 (90%), Positives = 94/102 (92%)
Frame = +2
Query: 365 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFE 544
ADCAVLIVAAG GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD T+PPYSE RFE
Sbjct: 109 ADCAVLIVAAGIGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFE 168
Query: 545 EIKXEVSSYIKKIGYNPXAVAFVPISGWHGDNMLEPSTKMPW 670
EIK EVSSYIKKIGYN +VAFVPISGWHGDNMLEPS K PW
Sbjct: 169 EIKKEVSSYIKKIGYNTASVAFVPISGWHGDNMLEPSPKTPW 210
Score = 24.6 bits (51), Expect = 0.86
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2
Query: 47 REKTHINIVVIG 82
+EK HINIVVIG
Sbjct: 3 KEKIHINIVVIG 14
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 206 bits (502), Expect = 2e-55
Identities = 97/102 (95%), Positives = 98/102 (96%)
Frame = +2
Query: 365 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFE 544
ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFE
Sbjct: 36 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFE 95
Query: 545 EIKXEVSSYIKKIGYNPXAVAFVPISGWHGDNMLEPSTKMPW 670
EIK EVSSYIKKIGYNP AVAFVPISGWHGDNMLE S+KMPW
Sbjct: 96 EIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPW 137
Score = 79.4 bits (187), Expect = 3e-17
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +3
Query: 261 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 365
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 35
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 206 bits (502), Expect = 2e-55
Identities = 97/102 (95%), Positives = 98/102 (96%)
Frame = +2
Query: 365 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFE 544
ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFE
Sbjct: 52 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFE 111
Query: 545 EIKXEVSSYIKKIGYNPXAVAFVPISGWHGDNMLEPSTKMPW 670
EIK EVSSYIKKIGYNP AVAFVPISGWHGDNMLE S+KMPW
Sbjct: 112 EIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPW 153
Score = 112 bits (269), Expect = 3e-27
Identities = 51/51 (100%), Positives = 51/51 (100%)
Frame = +3
Query: 213 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 365
WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 51
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +3
Query: 30 LTKNGQGKRLTLTLSSSGHVDSGKST 107
L++ ++ T+ + + GHV GKST
Sbjct: 32 LSREVISRQATINIGTIGHVAHGKST 57
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 22.2 bits (45), Expect = 4.6
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 300 VTIIDAPGHRDFI 338
VT +D PGH FI
Sbjct: 195 VTFLDTPGHAAFI 207
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.0
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -1
Query: 661 FG*RLQHVVSVPSRNGHESDSXWV 590
FG L H++ V +N + + WV
Sbjct: 35 FGLSLHHIIDVDEKNQILTTNCWV 58
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.4 bits (43), Expect = 8.0
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 75 SSGHVDSGKSTTTGH 119
SS H DSG++ + GH
Sbjct: 383 SSVHSDSGENNSRGH 397
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,673
Number of Sequences: 438
Number of extensions: 4021
Number of successful extensions: 20
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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