Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31819
         (664 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     23   2.6  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    23   3.4  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    23   3.4  

>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -3

Query: 287 SNKTYFVHNHFKLKHTCTVLIKKLSHTKKKLNLSS 183
           SN  YF+   F  +     +IKKL+   ++  LS+
Sbjct: 219 SNVPYFLFGDFNFRTDTAGVIKKLTEDTQERRLSN 253


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 373 LFSYLFFLTVYKNKNKKYHLHSVCK 299
           + S L   T++ N N KY+ ++ CK
Sbjct: 81  IISSLSNKTIHNNNNYKYNYNNNCK 105


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
          precursor protein.
          Length = 156

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 93 KFFHNSFNSTSFDITSYMI 37
          K+F  +F STSF + +Y I
Sbjct: 5  KYFGKNFPSTSFILINYFI 23


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,581
Number of Sequences: 438
Number of extensions: 3259
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19977660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)