Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31814
         (479 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              26   0.18 
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            25   0.56 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   2.2  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   3.9  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   3.9  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   3.9  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   5.2  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    21   6.9  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    21   6.9  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   9.1  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 26.2 bits (55), Expect = 0.18
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = +1

Query: 367 FRSFDRDNSGNIDRVELK 420
           F  +DR+N+GN++R EL+
Sbjct: 242 FSHYDRNNNGNLEREELE 259


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 24.6 bits (51), Expect = 0.56
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = -2

Query: 316 MI*HPYFVCQTYQSSDVQFQD*---MDSMFHWTEPVAVHQQICNHFYLCQH 173
           M+ HP+   +   S D Q +D     D   +   P ++H  IC++ ++C+H
Sbjct: 333 MLSHPFGTPRIMSSFDFQSKDQGPPNDGNGNILSP-SIHDNICSNGWICEH 382


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 12/50 (24%), Positives = 24/50 (48%)
 Frame = -2

Query: 460 HHQTICIQRL*VHSSIPLYLYSQNYHGQMIGNNFANQKHISKVHQSPQMI 311
           H++   +  L V  S+ L   + NY   +  N F ++ ++++V     MI
Sbjct: 604 HNRITELSPLSVPDSVELLFINNNYINLVRPNTFTDKVNLTRVDMYANMI 653


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -1

Query: 143 LGIGDWKVILI*GKKQPNKLYEMPH 69
           LG+   +VIL  G K P  L E+ H
Sbjct: 628 LGLEPPRVILSSGAKSPTVLEELTH 652


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -1

Query: 143 LGIGDWKVILI*GKKQPNKLYEMPH 69
           LG+   +VIL  G K P  L E+ H
Sbjct: 628 LGLEPPRVILSSGAKSPTVLEELTH 652


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -1

Query: 143 LGIGDWKVILI*GKKQPNKLYEMPH 69
           LG+   +VIL  G K P  L E+ H
Sbjct: 628 LGLEPPRVILSSGAKSPTVLEELTH 652


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 337 WKYVSDWQNCFRSFD 381
           W + +DW + +RS D
Sbjct: 112 WLFTTDWCDVWRSLD 126


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = -1

Query: 476 TIIPTTSSDNLYPKAVSAFFNSTLSIFPELSRSNDRKQFCQSET 345
           TI+PTT   N   K +  F  +T +I    S   D +    SE+
Sbjct: 84  TIVPTTQEINKPFKRLELFNITTTTIHSIHSIDGDEENGLTSES 127


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +1

Query: 250 FNPETVRLMIGMFDKQNRGVISFE 321
           +NPETV     M D+     ISFE
Sbjct: 419 YNPETVSTDYDMSDRLYFEEISFE 442


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 311 YHLRTLVHFGNMFLIGKIVSD 373
           YH   L +  NMF++   V+D
Sbjct: 91  YHTSKLRNVTNMFIVSLAVAD 111


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,809
Number of Sequences: 438
Number of extensions: 3464
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13051674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)