Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31793
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY533306-1|AAS21308.1| 383|Caenorhabditis elegans BRE-4 protein. 87 1e-17
AY130767-1|AAM95168.1| 383|Caenorhabditis elegans UDPGalNAc:Glc... 87 1e-17
AC025727-7|AAG23384.1| 383|Caenorhabditis elegans Bt (bacillus ... 87 1e-17
Z66521-7|CAA91401.2| 387|Caenorhabditis elegans Hypothetical pr... 79 3e-15
X98132-1|CAA66831.1| 387|Caenorhabditis elegans N-acetyllactosa... 79 3e-15
Z29095-5|CAA82350.1| 289|Caenorhabditis elegans Hypothetical pr... 70 1e-12
AJ005867-1|CAA06744.1| 289|Caenorhabditis elegans Sqv-3 protein... 70 1e-12
AF016428-2|AAO26002.1| 316|Caenorhabditis elegans Serpentine re... 34 0.10
AL021471-1|CAA16295.1| 241|Caenorhabditis elegans Hypothetical ... 29 2.9
AL132948-7|CAD31810.1| 426|Caenorhabditis elegans Hypothetical ... 27 8.8
>AY533306-1|AAS21308.1| 383|Caenorhabditis elegans BRE-4 protein.
Length = 383
Score = 86.6 bits (205), Expect = 1e-17
Identities = 43/90 (47%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
Frame = +1
Query: 349 GGEYIPQDCRPKFSTAIIVPYRDRAEQLRGFLVYMHTFFRRQRIHYRIFIIEQVDSRPFN 528
GG +P+DC + AIIVPYRDR LR L +H+ +Q++ Y IFI+EQV ++ FN
Sbjct: 136 GGHGMPKDCVARHRVAIIVPYRDREAHLRIMLHNLHSLLAKQQLDYAIFIVEQVANQTFN 195
Query: 529 RAKLLNIG-AVAAINAGFPCIGLHDVDLLP 615
R KL+N+G VA+ + C HDVDLLP
Sbjct: 196 RGKLMNVGYDVASRLYPWQCFIFHDVDLLP 225
>AY130767-1|AAM95168.1| 383|Caenorhabditis elegans
UDPGalNAc:GlcNAc{beta}-R
{beta}1,4-N-acetylgalactosaminyltransferase protein.
Length = 383
Score = 86.6 bits (205), Expect = 1e-17
Identities = 43/90 (47%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
Frame = +1
Query: 349 GGEYIPQDCRPKFSTAIIVPYRDRAEQLRGFLVYMHTFFRRQRIHYRIFIIEQVDSRPFN 528
GG +P+DC + AIIVPYRDR LR L +H+ +Q++ Y IFI+EQV ++ FN
Sbjct: 136 GGHGMPKDCVARHRVAIIVPYRDREAHLRIMLHNLHSLLAKQQLDYAIFIVEQVANQTFN 195
Query: 529 RAKLLNIG-AVAAINAGFPCIGLHDVDLLP 615
R KL+N+G VA+ + C HDVDLLP
Sbjct: 196 RGKLMNVGYDVASRLYPWQCFIFHDVDLLP 225
>AC025727-7|AAG23384.1| 383|Caenorhabditis elegans Bt (bacillus
thuringiensis) toxinresistant protein 4 protein.
Length = 383
Score = 86.6 bits (205), Expect = 1e-17
Identities = 43/90 (47%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
Frame = +1
Query: 349 GGEYIPQDCRPKFSTAIIVPYRDRAEQLRGFLVYMHTFFRRQRIHYRIFIIEQVDSRPFN 528
GG +P+DC + AIIVPYRDR LR L +H+ +Q++ Y IFI+EQV ++ FN
Sbjct: 136 GGHGMPKDCVARHRVAIIVPYRDREAHLRIMLHNLHSLLAKQQLDYAIFIVEQVANQTFN 195
Query: 529 RAKLLNIG-AVAAINAGFPCIGLHDVDLLP 615
R KL+N+G VA+ + C HDVDLLP
Sbjct: 196 RGKLMNVGYDVASRLYPWQCFIFHDVDLLP 225
>Z66521-7|CAA91401.2| 387|Caenorhabditis elegans Hypothetical
protein W02B12.11 protein.
Length = 387
Score = 79.0 bits (186), Expect = 3e-15
Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 1/119 (0%)
Frame = +1
Query: 262 DYHDIINDETTLSPNLIEGDLVEGHG-IRDGGEYIPQDCRPKFSTAIIVPYRDRAEQLRG 438
D + T L NL EG++ H + GG + P DC+ + A+I+PYR+R L
Sbjct: 117 DLQGALPQATLLIQNLQEGEVHAIHPELGPGGSWKPDDCQARDKIAVIIPYRERQTHLTR 176
Query: 439 FLVYMHTFFRRQRIHYRIFIIEQVDSRPFNRAKLLNIGAVAAINAGFPCIGLHDVDLLP 615
+ ++ +RQR+ +R + EQ + FN+ +++N + A + G C+ HDVD+ P
Sbjct: 177 LIDFLIPILQRQRLDFRFIVTEQYGNDLFNKGRIMNAAFIFAESLGVDCVVFHDVDMFP 235
>X98132-1|CAA66831.1| 387|Caenorhabditis elegans
N-acetyllactosamine synthase protein.
Length = 387
Score = 79.0 bits (186), Expect = 3e-15
Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 1/119 (0%)
Frame = +1
Query: 262 DYHDIINDETTLSPNLIEGDLVEGHG-IRDGGEYIPQDCRPKFSTAIIVPYRDRAEQLRG 438
D + T L NL EG++ H + GG + P DC+ + A+I+PYR+R L
Sbjct: 117 DLQGALPQATLLIQNLQEGEVHAIHPELGPGGSWKPDDCQARDKIAVIIPYRERQTHLTR 176
Query: 439 FLVYMHTFFRRQRIHYRIFIIEQVDSRPFNRAKLLNIGAVAAINAGFPCIGLHDVDLLP 615
+ ++ +RQR+ +R + EQ + FN+ +++N + A + G C+ HDVD+ P
Sbjct: 177 LIDFLIPILQRQRLDFRFIVTEQYGNDLFNKGRIMNAAFIFAESLGVDCVVFHDVDMFP 235
>Z29095-5|CAA82350.1| 289|Caenorhabditis elegans Hypothetical
protein R10E11.4 protein.
Length = 289
Score = 70.1 bits (164), Expect = 1e-12
Identities = 34/75 (45%), Positives = 46/75 (61%)
Frame = +1
Query: 397 IIVPYRDRAEQLRGFLVYMHTFFRRQRIHYRIFIIEQVDSRPFNRAKLLNIGAVAAINAG 576
+IVPYRDR E+LR F +M F Q + + I II Q D FNRA L+N+G A G
Sbjct: 55 VIVPYRDRLEELREFSPHMSKFLHNQNVSHHILIINQTDPLRFNRASLINVGWNEADRLG 114
Query: 577 FPCIGLHDVDLLPLS 621
+ ++DVDLLP++
Sbjct: 115 CDYMVMNDVDLLPVN 129
>AJ005867-1|CAA06744.1| 289|Caenorhabditis elegans Sqv-3 protein
protein.
Length = 289
Score = 70.1 bits (164), Expect = 1e-12
Identities = 34/75 (45%), Positives = 46/75 (61%)
Frame = +1
Query: 397 IIVPYRDRAEQLRGFLVYMHTFFRRQRIHYRIFIIEQVDSRPFNRAKLLNIGAVAAINAG 576
+IVPYRDR E+LR F +M F Q + + I II Q D FNRA L+N+G A G
Sbjct: 55 VIVPYRDRLEELREFSPHMSKFLHNQNVSHHILIINQTDPLRFNRASLINVGWNEADRLG 114
Query: 577 FPCIGLHDVDLLPLS 621
+ ++DVDLLP++
Sbjct: 115 CDYMVMNDVDLLPVN 129
>AF016428-2|AAO26002.1| 316|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 65 protein.
Length = 316
Score = 33.9 bits (74), Expect = 0.10
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +1
Query: 106 IYGVITILIFIIFSHPGLYGRSSYEFIEKHNILKYLHEEVNVNLTSNAFTNC 261
+ + T+L FIIF G+ S+Y F ++ IL +HE V+ LT A T C
Sbjct: 188 VTAIFTVLYFIIFIALGVMA-SAY-FSKQQQILSTMHETVSKKLTRIAITYC 237
>AL021471-1|CAA16295.1| 241|Caenorhabditis elegans Hypothetical
protein Y17D7C.1 protein.
Length = 241
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 100 KIIYGVITILIFIIFSHPGLYGRSSYEFIEKHN 198
+++YG + II + YG+SSY F EK N
Sbjct: 103 RVVYGDFLLFFLIILT---FYGQSSYRFFEKWN 132
>AL132948-7|CAD31810.1| 426|Caenorhabditis elegans Hypothetical
protein Y39B6A.8 protein.
Length = 426
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 462 LSPPTDTLSNIHNRTSRFPSIQQSKAV 542
+ PPTD + IH ++ RFP+ K++
Sbjct: 247 IEPPTDLVHVIHVKSDRFPAKNLEKSI 273
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,051,678
Number of Sequences: 27780
Number of extensions: 319138
Number of successful extensions: 895
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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