Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31788
(335 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein. 31 0.67
AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type ... 31 0.67
Y09723-1|CAA70889.1| 803|Homo sapiens Miz-1 protein protein. 29 4.7
BC126163-1|AAI26164.1| 803|Homo sapiens zinc finger and BTB dom... 29 4.7
AL034555-3|CAB85445.1| 803|Homo sapiens zinc finger and BTB dom... 29 4.7
AK223618-1|BAD97338.1| 803|Homo sapiens zinc finger and BTB dom... 29 4.7
DQ438889-1|ABE66441.1| 244|Homo sapiens GLIS family zinc finger... 28 8.2
DQ438888-1|ABE66440.1| 244|Homo sapiens GLIS family zinc finger... 28 8.2
DQ438887-1|ABE66439.1| 244|Homo sapiens GLIS family zinc finger... 28 8.2
DQ438886-1|ABE66438.1| 244|Homo sapiens GLIS family zinc finger... 28 8.2
DQ438877-1|ABE66434.1| 930|Homo sapiens GLIS family zinc finger... 28 8.2
>BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein.
Length = 322
Score = 31.5 bits (68), Expect = 0.67
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 201 TPLRPKPAXPNPARICSLWSPESRE 275
TP P P P PA +CS SPE R+
Sbjct: 68 TPTPPTPVLPGPASLCSPASPELRQ 92
>AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type
containing 12 protein.
Length = 210
Score = 31.5 bits (68), Expect = 0.67
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 201 TPLRPKPAXPNPARICSLWSPESRE 275
TP P P P PA +CS SPE R+
Sbjct: 68 TPTPPTPVLPGPASLCSPASPELRQ 92
>Y09723-1|CAA70889.1| 803|Homo sapiens Miz-1 protein protein.
Length = 803
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 179 PSAGLCLNASKAEASLXESGKDMLTVEPRESGGSKQ 286
P++G+ A++AEA+L ES + + VEP G +Q
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234
>BC126163-1|AAI26164.1| 803|Homo sapiens zinc finger and BTB domain
containing 17 protein.
Length = 803
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 179 PSAGLCLNASKAEASLXESGKDMLTVEPRESGGSKQ 286
P++G+ A++AEA+L ES + + VEP G +Q
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234
>AL034555-3|CAB85445.1| 803|Homo sapiens zinc finger and BTB domain
containing 17 protein.
Length = 803
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 179 PSAGLCLNASKAEASLXESGKDMLTVEPRESGGSKQ 286
P++G+ A++AEA+L ES + + VEP G +Q
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234
>AK223618-1|BAD97338.1| 803|Homo sapiens zinc finger and BTB domain
containing 17 variant protein.
Length = 803
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 179 PSAGLCLNASKAEASLXESGKDMLTVEPRESGGSKQ 286
P++G+ A++AEA+L ES + + VEP G +Q
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234
>DQ438889-1|ABE66441.1| 244|Homo sapiens GLIS family zinc finger 3
transcript variant TS5 protein.
Length = 244
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = -1
Query: 188 PRMVASHHRPLGRVHE--PNVRNCGSS 114
PRMV+ HH P R H P CGS+
Sbjct: 20 PRMVSGHHIPAIRAHSGTPGPSPCGST 46
>DQ438888-1|ABE66440.1| 244|Homo sapiens GLIS family zinc finger 3
transcript variant TS4 protein.
Length = 244
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = -1
Query: 188 PRMVASHHRPLGRVHE--PNVRNCGSS 114
PRMV+ HH P R H P CGS+
Sbjct: 20 PRMVSGHHIPAIRAHSGTPGPSPCGST 46
>DQ438887-1|ABE66439.1| 244|Homo sapiens GLIS family zinc finger 3
transcript variant TS3 protein.
Length = 244
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = -1
Query: 188 PRMVASHHRPLGRVHE--PNVRNCGSS 114
PRMV+ HH P R H P CGS+
Sbjct: 20 PRMVSGHHIPAIRAHSGTPGPSPCGST 46
>DQ438886-1|ABE66438.1| 244|Homo sapiens GLIS family zinc finger 3
transcript variant TS2 protein.
Length = 244
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = -1
Query: 188 PRMVASHHRPLGRVHE--PNVRNCGSS 114
PRMV+ HH P R H P CGS+
Sbjct: 20 PRMVSGHHIPAIRAHSGTPGPSPCGST 46
>DQ438877-1|ABE66434.1| 930|Homo sapiens GLIS family zinc finger 3
transcript variant long T1 protein.
Length = 930
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = -1
Query: 188 PRMVASHHRPLGRVHE--PNVRNCGSS 114
PRMV+ HH P R H P CGS+
Sbjct: 20 PRMVSGHHIPAIRAHSGTPGPSPCGST 46
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,960,423
Number of Sequences: 237096
Number of extensions: 929573
Number of successful extensions: 1971
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1971
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1794632842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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