Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31783
(304 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 46 9e-07
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 38 3e-04
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 38 3e-04
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 31 0.028
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 31 0.049
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 29 0.11
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 28 0.26
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 28 0.35
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 27 0.46
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 26 1.4
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 25 1.8
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 25 1.8
SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolo... 25 3.2
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 24 5.6
SPAC3G9.08 |png1||ING family homolog Png1|Schizosaccharomyces po... 24 5.6
SPAC23G3.04 |||DUF1711 family protein|Schizosaccharomyces pombe|... 24 5.6
SPBP23A10.14c |ell1||RNA polymerase II transcription elongation ... 23 7.5
SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr 1||... 23 9.9
SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces ... 23 9.9
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 46.4 bits (105), Expect = 9e-07
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = +1
Query: 205 FAKDFLAGGISAAVXKTVVAPIERVKLLLQVQ 300
F DF+ GG+SAAV KT APIERVKLL+Q Q
Sbjct: 27 FFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQ 58
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 37.9 bits (84), Expect = 3e-04
Identities = 14/28 (50%), Positives = 24/28 (85%)
Frame = +1
Query: 220 LAGGISAAVXKTVVAPIERVKLLLQVQH 303
L+GG++A V +T V+P+ER+K++ QVQ+
Sbjct: 25 LSGGVAATVSRTAVSPLERMKIIFQVQN 52
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 37.9 bits (84), Expect = 3e-04
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +1
Query: 211 KDFLAGGISAAVXKTVVAPIERVKLLLQVQH 303
K +AGG + V K+VVAP++RVK+L Q H
Sbjct: 19 KSGIAGGTAGCVAKSVVAPLDRVKILYQTNH 49
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 31.5 bits (68), Expect = 0.028
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 193 DPVAFAKDFLAGGISAAVXKTVVAPIERVKLLL 291
DP F++GGI+ V +T AP++R+K++L
Sbjct: 123 DPKNNVGYFISGGIAGIVSRTCTAPLDRLKVML 155
Score = 24.6 bits (51), Expect = 3.2
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = +1
Query: 217 FLAGGISAAVXKTVVAPIERVKLLLQ 294
+LAGG++ +V + + P++ +K +Q
Sbjct: 232 YLAGGMAGSVAQMFIYPVDTLKFRIQ 257
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 30.7 bits (66), Expect = 0.049
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 196 PVAFAKDFLAGGISAAVXKTVVAPIERVKLLLQVQ 300
PV + +++G IS +V P+E V++ LQ+Q
Sbjct: 109 PVTMPQYYVSGAISGLANSFLVGPVEHVRIRLQIQ 143
Score = 27.5 bits (58), Expect = 0.46
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +1
Query: 202 AFAKDFLAGGISAAVXKTVVA-PIERVKLLLQVQ 300
+F KDFLA G+S V + +V P + VK+ LQ Q
Sbjct: 16 SFTKDFLA-GVSGGVAQVLVGQPFDCVKVRLQSQ 48
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 29.5 bits (63), Expect = 0.11
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +1
Query: 220 LAGGISAAVXKTVVAPIERVKLLLQV 297
LAGGIS+ + + ++AP + +K+ +Q+
Sbjct: 21 LAGGISSVICRFMIAPFDVIKIRMQI 46
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 28.3 bits (60), Expect = 0.26
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 154 VKIT*SNKMSNLADPVAFAKDFLAGGISAAVXKTVVAPIERVKLLLQ 294
V +T +N SN P + F+AGG++ + AP++ VK LQ
Sbjct: 32 VLLTKANNASNERAPPPLSH-FIAGGVAGMLGAIATAPLDVVKTRLQ 77
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 27.9 bits (59), Expect = 0.35
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +1
Query: 220 LAGGISAAVXKTVVAPIERVKLLLQVQ 300
++GG+S A+ ++ P++ VK LLQ +
Sbjct: 209 ISGGLSGAIASSLTTPLDVVKTLLQTR 235
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 27.5 bits (58), Expect = 0.46
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 211 KDFLAGGISAAVXKTVVAPIERVKLLLQVQ 300
KD +AGG + VVAP++ VK Q Q
Sbjct: 7 KDAIAGGAAGLASSLVVAPLDVVKTRKQAQ 36
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 25.8 bits (54), Expect = 1.4
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +3
Query: 54 YEITPNLLFKNXELVFRDPPSACAATPTSTY 146
YE+ N F N PP AC+ TS Y
Sbjct: 362 YEMKQNDAFNNNNPATATPPPACSLLETSWY 392
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 25.4 bits (53), Expect = 1.8
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +3
Query: 66 PNLLFKNXELVFRDPPSACAATPT 137
P + K E + RDPP A PT
Sbjct: 4 PKRIIKEIETLTRDPPPGIVAAPT 27
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 25.4 bits (53), Expect = 1.8
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 217 FLAGGISAAVXKTVVAPIERVKLLLQVQ 300
FL+GG++A T+ P E +K Q+Q
Sbjct: 27 FLSGGLAACGAVTLTNPFEVIKTRFQLQ 54
>SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolog
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 24.6 bits (51), Expect = 3.2
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 34 TLC--APVITKLLQISCSKIXS*CFVIPHPRVPQLPPRHIHLV 156
T+C AP + L ++C+K+ C + PR PR+ HL+
Sbjct: 551 TICNIAPFVENLSFVTCAKLMQLCSSLSSPRFLFRNPRN-HLL 592
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 23.8 bits (49), Expect = 5.6
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 108 PPSACAATPTSTYSPSED 161
PPSA + P+S+ SPS D
Sbjct: 374 PPSATSFQPSSSRSPSVD 391
>SPAC3G9.08 |png1||ING family homolog Png1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 23.8 bits (49), Expect = 5.6
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +3
Query: 111 PSACAATPTSTYSPSEDHIIEQNVEPRRSG 200
P A++P YSPS Q P RSG
Sbjct: 126 PDYYASSPYGGYSPSGASSARQTPAPSRSG 155
>SPAC23G3.04 |||DUF1711 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 194
Score = 23.8 bits (49), Expect = 5.6
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +3
Query: 84 NXELVFRDPPSACAATPTSTYSPSEDHIIEQNVEP-RRSGR 203
N EL PS+ AATPT + S +I + RSG+
Sbjct: 75 NDELAESSKPSSGAATPTRSAPKSSAGLINSGLRALDRSGK 115
>SPBP23A10.14c |ell1||RNA polymerase II transcription elongation
factor SpELL|Schizosaccharomyces pombe|chr 2|||Manual
Length = 533
Score = 23.4 bits (48), Expect = 7.5
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 102 RDPPSACAATPTSTYSPSEDHIIEQNV-EPRRS 197
R PP + +TP T S S + +E N P+++
Sbjct: 416 RSPPQSLPSTPFPTSSSSTNGTLEPNANSPKKN 448
>SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1116
Score = 23.0 bits (47), Expect = 9.9
Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 3/22 (13%)
Frame = +3
Query: 18 KKAHTYPLCSRDYEIT---PNL 74
KK +YP+ + D+EIT PNL
Sbjct: 416 KKQPSYPVLTSDFEITDAGPNL 437
>SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 23.0 bits (47), Expect = 9.9
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -3
Query: 290 SSSLTRSMGATTVLXTAAEIPPARKSLANATGSARFD 180
S + S+G++ L + PP+ S N S+R+D
Sbjct: 131 SHPMLNSLGSSLSLKKSVSRPPSSMSRTNLDVSSRWD 167
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,091,182
Number of Sequences: 5004
Number of extensions: 19044
Number of successful extensions: 74
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 74
length of database: 2,362,478
effective HSP length: 63
effective length of database: 2,047,226
effective search space used: 75747362
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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