Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31776
         (648 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69384-8|CAM06585.1|  495|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z69384-7|CAA93417.2|  502|Caenorhabditis elegans Hypothetical pr...    27   8.7  
U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>Z69384-8|CAM06585.1|  495|Caenorhabditis elegans Hypothetical
           protein T11G6.2b protein.
          Length = 495

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 462 FSFILFFSLPGGKWHLSS 515
           +SF++FF LP   W +SS
Sbjct: 217 YSFLVFFQLPSAPWEVSS 234


>Z69384-7|CAA93417.2|  502|Caenorhabditis elegans Hypothetical
           protein T11G6.2a protein.
          Length = 502

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 462 FSFILFFSLPGGKWHLSS 515
           +SF++FF LP   W +SS
Sbjct: 224 YSFLVFFQLPSAPWEVSS 241


>U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical protein
            F21C10.7 protein.
          Length = 2541

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -3

Query: 511  ERCHFPPGREKNNINENRQKLESRQ*HLQEHLT*MQI-PISNTEHSRRRSS 362
            E+  FP  RE   I + ++ +E  + H +EHL+   I P+      R+  S
Sbjct: 1473 EKTDFPQPREPEKIVDEKRWVELVEQHFEEHLSQRSISPVPQIREVRKTES 1523


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,639,910
Number of Sequences: 27780
Number of extensions: 270950
Number of successful extensions: 621
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 621
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)