Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31776
         (648 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    25   0.83 
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    24   1.1  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    23   1.9  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    22   4.4  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   4.4  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   7.8  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 53  ALTWL*WINDSILEYFENF 109
           ALTWL WIN +I  +   F
Sbjct: 343 ALTWLGWINSAINPFIYAF 361


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 117 NSIHICMERWNRQH*ITDFCNTGFPS 194
           N++ I ++RWN +  +T   N G PS
Sbjct: 64  NNVPIDVDRWNGKTFVTILRNDGVPS 89


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
 Frame = +1

Query: 121 VYISVWNAGIDST--ESLTFVTQVFLA 195
           VY  V    IDS   ES+T+V  +FLA
Sbjct: 32  VYFHVTVLSIDSINEESMTYVADIFLA 58


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/19 (36%), Positives = 15/19 (78%)
 Frame = +1

Query: 559 KKLYTALGK*KVNLRSHVI 615
           +K+Y +LG  K+++R+H +
Sbjct: 23  EKVYVSLGALKMHIRTHTL 41


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 559 LSDKGAKRQLCLAQRDERC 503
           L + G +R L LAQ DE C
Sbjct: 630 LGELGGERLLKLAQGDEMC 648


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 53  ALTWL*WINDSI 88
           A+TWL WIN  +
Sbjct: 374 AVTWLGWINSGM 385


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,108
Number of Sequences: 438
Number of extensions: 3701
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)