Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31768
         (598 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.3  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   3.0  
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    21   6.9  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    21   6.9  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   9.2  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   9.2  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 348  LRVAPEEHPVLLTEAPLNPKANREKM 425
            LR+ P  H V+ T   +NP  + EK+
Sbjct: 1461 LRLGPCWHAVMTTYPRINPDNHNEKL 1486



 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = -3

Query: 209  HADHHTLMAGPSDDRGEYGARSIISCETG 123
            H   H      +DD+  +  R ++SC +G
Sbjct: 1686 HCTIHRTQVKETDDKICFTMRPVVSCASG 1714


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 17/47 (36%), Positives = 21/47 (44%)
 Frame = -2

Query: 240 PRLLRTSLSVPCRPSHPDGGAFRRSRGIRREEHHLLRNRPCTYRSHC 100
           PR++    +V CR S P G A   S    R E  L     C Y +HC
Sbjct: 704 PRIMDLD-NVMCRTSGPRGVAI-VSASTARSEQFL-----CRYEAHC 743


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -3

Query: 551 VGDTVAGVQHDTGGTTGRVQREHGLDGDVHG 459
           VGD +A ++ D  G    +  E+G  G   G
Sbjct: 42  VGDDIAWMKFDKEGRLRAINPEYGFFGVAPG 72


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 111 GMCKAGFAGD 140
           GMCK G +GD
Sbjct: 130 GMCKEGISGD 139


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 129 NRPCTYRSHCLLPTRQLPR 73
           N   TY + CLL  ++ PR
Sbjct: 478 NMAATYMNECLLNIQKSPR 496


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 194 CDGRHGTERLVRRRRGTEQKRY 259
           CDG+ G    ++  +GTE  +Y
Sbjct: 493 CDGKPGLCDAMKPTKGTELLKY 514


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,699
Number of Sequences: 438
Number of extensions: 4597
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)