Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31766
         (308 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF038609-3|AAU87825.1|  193|Caenorhabditis elegans Hypothetical ...   128   1e-30
Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical pr...    26   6.2  
Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical pr...    26   6.2  
Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical pr...    26   6.2  
Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical pr...    26   6.2  
Z83319-5|CAB05907.2|  446|Caenorhabditis elegans Hypothetical pr...    25   8.1  

>AF038609-3|AAU87825.1|  193|Caenorhabditis elegans Hypothetical
           protein C54E4.5 protein.
          Length = 193

 Score =  128 bits (308), Expect = 1e-30
 Identities = 53/88 (60%), Positives = 65/88 (73%)
 Frame = +1

Query: 43  VHAFQTAERIREDHPDEDWFHLTGLIHDLXKVMAFYDEPQWCVVGDTFPVGCKWADSIVY 222
           +HA+QTAE+IRE+HPD+ W HL GLIHDL K+M+ + E QW V GDT+PVGC  A SIVY
Sbjct: 88  IHAYQTAEKIRENHPDKPWMHLAGLIHDLGKIMSVWGEEQWAVTGDTYPVGCAPAASIVY 147

Query: 223 GPESFKDNPDTYNPKYNTKYGMYKPHCG 306
           G  SF  NPD  +P Y T+ GMY+  CG
Sbjct: 148 GKSSFDGNPDISHPVYGTQMGMYQEKCG 175


>Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical protein
            T24B8.7b protein.
          Length = 2923

 Score = 25.8 bits (54), Expect = 6.2
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
 Frame = +1

Query: 25   GTYQTFVHAF--QTAERIREDHPDEDWFHL----TGLIHDLXKVMAFYDEPQWCVVGD 180
            G  QT V  F  ++  R RED  D DW  L      +I D  K +  + +P++C   +
Sbjct: 1591 GIVQTVVEIFYFESPRRCREDQKDIDWSQLGHKPIEIIRDQIKSLLGF-KPRFCTTNN 1647


>Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical protein
            T24B8.7a protein.
          Length = 2920

 Score = 25.8 bits (54), Expect = 6.2
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
 Frame = +1

Query: 25   GTYQTFVHAF--QTAERIREDHPDEDWFHL----TGLIHDLXKVMAFYDEPQWCVVGD 180
            G  QT V  F  ++  R RED  D DW  L      +I D  K +  + +P++C   +
Sbjct: 1588 GIVQTVVEIFYFESPRRCREDQKDIDWSQLGHKPIEIIRDQIKSLLGF-KPRFCTTNN 1644


>Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical protein
            T24B8.7b protein.
          Length = 2923

 Score = 25.8 bits (54), Expect = 6.2
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
 Frame = +1

Query: 25   GTYQTFVHAF--QTAERIREDHPDEDWFHL----TGLIHDLXKVMAFYDEPQWCVVGD 180
            G  QT V  F  ++  R RED  D DW  L      +I D  K +  + +P++C   +
Sbjct: 1591 GIVQTVVEIFYFESPRRCREDQKDIDWSQLGHKPIEIIRDQIKSLLGF-KPRFCTTNN 1647


>Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical protein
            T24B8.7a protein.
          Length = 2920

 Score = 25.8 bits (54), Expect = 6.2
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
 Frame = +1

Query: 25   GTYQTFVHAF--QTAERIREDHPDEDWFHL----TGLIHDLXKVMAFYDEPQWCVVGD 180
            G  QT V  F  ++  R RED  D DW  L      +I D  K +  + +P++C   +
Sbjct: 1588 GIVQTVVEIFYFESPRRCREDQKDIDWSQLGHKPIEIIRDQIKSLLGF-KPRFCTTNN 1644


>Z83319-5|CAB05907.2|  446|Caenorhabditis elegans Hypothetical
           protein T02D1.4 protein.
          Length = 446

 Score = 25.4 bits (53), Expect = 8.1
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = +2

Query: 191 LVVNGLTLSCMVPRASR 241
           L++N LTL CM+P+A R
Sbjct: 130 LLMNSLTLICMLPQALR 146


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,513,894
Number of Sequences: 27780
Number of extensions: 143723
Number of successful extensions: 293
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 293
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 333802358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)