Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31763
         (414 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81476-3|CAB03922.3|  592|Caenorhabditis elegans Hypothetical pr...    27   4.1  
Z75545-3|CAA99886.1|  922|Caenorhabditis elegans Hypothetical pr...    27   4.1  
U80438-1|AAB37631.1|  400|Caenorhabditis elegans Hypothetical pr...    27   4.1  
Z81109-5|CAB03251.1|  588|Caenorhabditis elegans Hypothetical pr...    27   7.1  
U61952-8|AAB03166.1| 1372|Caenorhabditis elegans Temporarily ass...    27   7.1  
Z49068-6|CAA88857.1|  239|Caenorhabditis elegans Hypothetical pr...    26   9.4  
AF099914-7|AAC68762.1|  220|Caenorhabditis elegans Hypothetical ...    26   9.4  
AF067215-4|AAC17012.1|  244|Caenorhabditis elegans Hypothetical ...    26   9.4  

>Z81476-3|CAB03922.3|  592|Caenorhabditis elegans Hypothetical
           protein C25F9.4 protein.
          Length = 592

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +3

Query: 45  RLPRLPNTYKMSHTVLRGKPNASQLYLDEVLNEILAA 155
           R PR PN YK   T  + + N ++  + +  N +LAA
Sbjct: 440 RFPRSPNDYKKHITNAKKEKNENEPNISKFCNNMLAA 476


>Z75545-3|CAA99886.1|  922|Caenorhabditis elegans Hypothetical
           protein K10D3.4 protein.
          Length = 922

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -2

Query: 356 NVVPCGPSGHYRTCNRYS 303
           N+VP   +G+YRTCN Y+
Sbjct: 870 NLVPVELAGNYRTCNPYA 887


>U80438-1|AAB37631.1|  400|Caenorhabditis elegans Hypothetical
           protein T19B4.5 protein.
          Length = 400

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 380 LMVSHHHHNVVPCGPSGHYRTCNRYSA 300
           ++V HHHH  +   P  H+   NR SA
Sbjct: 40  MVVDHHHHPQLRGNPMHHHHYDNRQSA 66


>Z81109-5|CAB03251.1|  588|Caenorhabditis elegans Hypothetical
           protein R10D12.8 protein.
          Length = 588

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 215 PLSKETTKRHKHDKRIDWR 271
           PL++ T KR   DK  DWR
Sbjct: 556 PLAESTLKRESKDKTSDWR 574


>U61952-8|AAB03166.1| 1372|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 137, isoform a protein.
          Length = 1372

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 15/58 (25%), Positives = 27/58 (46%)
 Frame = +3

Query: 177 KERDRLILAEIAFHCLKKRPNATNMINGSTGESFTNEQILKRAVSIARSIMARGAAGN 350
           KER R + +++         +  NM++G  G S   E +L  A  +++    R +A N
Sbjct: 760 KERKRTVGSDLGLSSSSHLRSCRNMLSGFAGGSLIAEILLLNARVLSQMSSRRNSAAN 817


>Z49068-6|CAA88857.1|  239|Caenorhabditis elegans Hypothetical
           protein K01C8.6 protein.
          Length = 239

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 17/62 (27%), Positives = 31/62 (50%)
 Frame = -1

Query: 276 NFLQSIRLSCLWRLVVSLDNGKQFLLISIYPALLHLERHLWPLIFHLTLHLDTVEKRLAS 97
           N+++ + +    R+V  +D  +   L S+     H  + L   +  +T+ LDTV + L S
Sbjct: 166 NWIEPLVMMADGRIVDMVDARELAKLSSLEDLRAHTVQLLGQQVAQVTISLDTVTRHLPS 225

Query: 96  LL 91
           LL
Sbjct: 226 LL 227


>AF099914-7|AAC68762.1|  220|Caenorhabditis elegans Hypothetical
           protein C40A11.7 protein.
          Length = 220

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 15/73 (20%), Positives = 36/73 (49%)
 Frame = +3

Query: 111 SQLYLDEVLNEILAAKGVVPDAKERDRLILAEIAFHCLKKRPNATNMINGSTGESFTNEQ 290
           S  Y + VLN + +   V+PD+++  + +  E  F+ L++  +    IN       ++ +
Sbjct: 54  SPKYFETVLNYMRSGVTVLPDSEKELQELKKEAEFYLLEQLVDLCEPINNQIRTYRSSHE 113

Query: 291 ILKRAVSIARSIM 329
           +L+   S  + ++
Sbjct: 114 LLQIIASTKKPVV 126


>AF067215-4|AAC17012.1|  244|Caenorhabditis elegans Hypothetical
           protein ZK380.4 protein.
          Length = 244

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = +3

Query: 33  GRQTRLPRL--PNTYKMSHTVLRGKPNAS 113
           G+  +LP L  PNTY    TV+ G+P ++
Sbjct: 92  GKCPKLPELVEPNTYGNGETVMTGQPRSA 120


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,972,220
Number of Sequences: 27780
Number of extensions: 203174
Number of successful extensions: 624
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 623
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)