Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31760
(450 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0217 + 2337950-2338085,2340766-2342436,2342636-2342898,234... 111 2e-25
03_06_0252 - 32656068-32656276,32656361-32656550,32656682-326567... 111 3e-25
03_06_0253 - 32666152-32666360,32666443-32666632,32666764-326668... 110 6e-25
03_04_0157 + 17791540-17791681,17792809-17792908,17793386-177934... 109 1e-24
07_01_1146 + 10756897-10757065,10763869-10765521,10765638-107659... 103 7e-23
07_01_0464 - 3504264-3504475,3504842-3505031,3505310-3505408,350... 99 2e-21
07_01_1149 + 10789733-10791209,10791326-10791588,10791745-107919... 58 4e-09
05_05_0196 + 23152389-23152658,23153042-23153092,23153167-231532... 32 0.19
03_04_0011 + 16398093-16398170,16401321-16401806,16401892-164023... 29 1.7
10_08_0330 - 16816497-16819952 28 4.0
02_05_0734 + 31318380-31318610,31319422-31319988 28 4.0
07_03_1753 + 29224766-29224911,29225045-29225147 27 7.0
02_05_0033 + 25250312-25250563,25251469-25251540,25251925-252520... 27 7.0
01_01_0975 - 7686297-7686458,7687117-7687245,7687754-7687831,768... 27 7.0
08_02_0552 - 18540330-18540590 27 9.2
>10_01_0217 +
2337950-2338085,2340766-2342436,2342636-2342898,
2343027-2343236,2343436-2343654,2344038-2345000,
2345279-2345374,2345482-2345580,2345953-2346142,
2346594-2346823
Length = 1358
Score = 111 bits (267), Expect = 2e-25
Identities = 62/164 (37%), Positives = 86/164 (52%), Gaps = 17/164 (10%)
Frame = +2
Query: 8 VNGKKVLESNPDPEWTLLFYLRKKLKLXXXXXXXXXXXXXXXXVMVSKYLKNEDRINHIA 187
VNG++ DP TLL +LR + V+VSKY D + +
Sbjct: 10 VNGERYEAVGVDPSMTLLEFLRTRTPFRGPKLGCGEGGCGACAVVVSKYDAAADEVTSFS 69
Query: 188 VNACLISVCAMHGLAVTTVXGIGSTQDRLHPVQERIAKSHGSQCGFCTPGIVMSMYALLR 367
++CL + ++H AVTT GIG+++D HPVQ R+A H SQCGFCTPG+ +S+++ L
Sbjct: 70 ASSCLTLLGSLHHCAVTTSEGIGNSRDGFHPVQRRLAGFHASQCGFCTPGMCVSIFSALA 129
Query: 368 NNNKIA-----------------YEDIEGALQGNLCRCTGYRPI 448
N ++ A D E A+ GNLCRCTGYRPI
Sbjct: 130 NADRAASAAPPPPPTPPGFSRLTAADAERAVSGNLCRCTGYRPI 173
>03_06_0252 -
32656068-32656276,32656361-32656550,32656682-32656780,
32656917-32657012,32657200-32658153,32658476-32658694,
32658911-32659120,32659241-32659503,32659605-32661281,
32663639-32663792
Length = 1356
Score = 111 bits (266), Expect = 3e-25
Identities = 61/160 (38%), Positives = 85/160 (53%), Gaps = 13/160 (8%)
Frame = +2
Query: 8 VNGKKVLESNPDPEWTLLFYLRKKLKLXXXXXXXXXXXXXXXXVMVSKYLKNEDRINHIA 187
VNG++ DP TLL +LR + + V+VSKY D + +
Sbjct: 16 VNGERYEAVGVDPSTTLLEFLRTRTPVRGPKLGCGEGGCGACVVVVSKYDAVADEVTEFS 75
Query: 188 VNACLISVCAMHGLAVTTVXGIGSTQDRLHPVQERIAKSHGSQCGFCTPGIVMSMYALLR 367
++CL + ++H AVTT GIG+++D H VQ R++ H SQCGFCTPG+ MS+Y+ L
Sbjct: 76 ASSCLTLLGSLHHCAVTTSEGIGNSRDGFHAVQRRLSGFHASQCGFCTPGMCMSIYSALA 135
Query: 368 NN-------------NKIAYEDIEGALQGNLCRCTGYRPI 448
+KI + E A+ GNLCRCTGYRPI
Sbjct: 136 KADKASGRPAPPTGFSKITAAEAEKAVSGNLCRCTGYRPI 175
>03_06_0253 -
32666152-32666360,32666443-32666632,32666764-32666862,
32666999-32667094,32667408-32668361,32668683-32668901,
32669282-32669491,32669617-32669879,32670041-32671717,
32672702-32672852
Length = 1355
Score = 110 bits (264), Expect = 6e-25
Identities = 60/160 (37%), Positives = 85/160 (53%), Gaps = 13/160 (8%)
Frame = +2
Query: 8 VNGKKVLESNPDPEWTLLFYLRKKLKLXXXXXXXXXXXXXXXXVMVSKYLKNEDRINHIA 187
VNG++ DP TLL +LR + + V+VSKY D + +
Sbjct: 15 VNGERYEAVGVDPSTTLLEFLRTRTPVRGPKLGCGEGGCGACVVVVSKYDAVADEVTEFS 74
Query: 188 VNACLISVCAMHGLAVTTVXGIGSTQDRLHPVQERIAKSHGSQCGFCTPGIVMSMYALLR 367
++CL + ++H AVTT GIG+++D H VQ R++ H SQCGFCTPG+ MS+Y+ L
Sbjct: 75 ASSCLTLLGSLHHCAVTTSEGIGNSRDGFHAVQRRLSGFHASQCGFCTPGMCMSIYSALA 134
Query: 368 NN-------------NKIAYEDIEGALQGNLCRCTGYRPI 448
+K+ + E A+ GNLCRCTGYRPI
Sbjct: 135 KADRCSSRPSPPPGFSKLTAAEAEKAVSGNLCRCTGYRPI 174
>03_04_0157 +
17791540-17791681,17792809-17792908,17793386-17793477,
17793562-17793620,17794135-17795637,17796478-17796720,
17796831-17797145,17797571-17797573,17798399-17798638,
17798975-17799259,17799335-17799556,17800105-17800266,
17800411-17800545,17802452-17802688,17802787-17802960,
17803692-17803934
Length = 1384
Score = 109 bits (262), Expect = 1e-24
Identities = 67/163 (41%), Positives = 90/163 (55%), Gaps = 15/163 (9%)
Frame = +2
Query: 5 FVNGKKVLESNPDPEWTLLFYLRKKLKLXXXXXXXXXXXXXXXXVMVSKYLKNEDRINHI 184
+VNG + + + TLL YLR + L VMVS Y + + H
Sbjct: 25 YVNGVRRVLPDGLAHLTLLQYLRD-IGLPGTKLGCGEGGCGACTVMVSCYDQTTKKTQHF 83
Query: 185 AVNACLISVCAMHGLAVTTVXGIGSTQDRLHPV--------------QERIAKSHGSQCG 322
A+NACL + ++ G+ + TV GIG+ Q + +ER+A +HGSQCG
Sbjct: 84 AINACLAPLYSVEGMHIITVEGIGNRQRAVWNYLCDEVVTCWLKTLRKERLAMAHGSQCG 143
Query: 323 FCTPGIVMSMYALLRNNNKIAYED-IEGALQGNLCRCTGYRPI 448
FCTPG VMSMYALLR++ + E+ IE +L GNLCRCTGYRPI
Sbjct: 144 FCTPGFVMSMYALLRSSEQPPTEEQIEDSLAGNLCRCTGYRPI 186
>07_01_1146 +
10756897-10757065,10763869-10765521,10765638-10765900,
10766057-10766266,10766818-10767036,10767379-10768344,
10768575-10768670,10768772-10768870,10769349-10769538,
10769623-10769855
Length = 1365
Score = 103 bits (247), Expect = 7e-23
Identities = 51/163 (31%), Positives = 88/163 (53%), Gaps = 14/163 (8%)
Frame = +2
Query: 2 FFVNGKK--VLESNPDPEWTLLFYLRKKLKLXXXXXXXXXXXXXXXXVMVSKYLKNEDRI 175
F +NG++ V ++ DP TLL ++R + ++++KY D +
Sbjct: 17 FALNGERQEVAAADVDPSTTLLEFIRTRTPFKGPKLGCGEGGCGACVILIAKYNPKTDEV 76
Query: 176 NHIAVNACLISVCAMHGLAVTTVXGIGSTQDRLHPVQERIAKSHGSQCGFCTPGIVMSMY 355
++CL + ++H ++ T G+G+T+D H +Q+R++ H SQCGFCTPG+ MS++
Sbjct: 77 TEFNASSCLTLLYSIHFCSIITTEGLGNTKDGFHAIQKRMSGFHASQCGFCTPGMCMSIF 136
Query: 356 ALLRNN------------NKIAYEDIEGALQGNLCRCTGYRPI 448
+ L N +K++ + E + GN+CRCTGYRPI
Sbjct: 137 SSLVNADKSKKPDPPKGFSKLSVSEAERSFSGNMCRCTGYRPI 179
>07_01_0464 -
3504264-3504475,3504842-3505031,3505310-3505408,
3505561-3505653,3505926-3506891,3507267-3507485,
3508038-3508247,3508371-3508630,3508956-3510737,
3510796-3511009
Length = 1414
Score = 98.7 bits (235), Expect = 2e-21
Identities = 54/118 (45%), Positives = 67/118 (56%), Gaps = 14/118 (11%)
Frame = +2
Query: 137 VMVSKYLKNEDRINHIAVNACLISVCAMHGLAVTTVXGIGSTQDRLHPVQERIAKSHGSQ 316
V+VS Y D + H AV++CL +H AVTT G+GS++ LH + ER+A H SQ
Sbjct: 79 VVVSAYDAEADEVAHAAVSSCLTLARGLHHRAVTTTEGLGSSRRGLHALHERLAGFHASQ 138
Query: 317 CGFCTPGIVMSM---YALLRNNNKIAYEDIEG-----------ALQGNLCRCTGYRPI 448
CGFCTPG+ MS+ A N K A EG A+ GNLCRCTGYRPI
Sbjct: 139 CGFCTPGVCMSLAGALAAAEGNGKKAASAAEGFSRLTAAEAERAVAGNLCRCTGYRPI 196
>07_01_1149 +
10789733-10791209,10791326-10791588,10791745-10791954,
10792398-10792475,10792505-10792705,10792768-10792908,
10794749-10795714,10797824-10797919,10798450-10798638,
10798849-10798956
Length = 1242
Score = 57.6 bits (133), Expect = 4e-09
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 12/60 (20%)
Frame = +2
Query: 305 HGSQCGFCTPGIVMSMYALLRNN------------NKIAYEDIEGALQGNLCRCTGYRPI 448
H SQCGFCTPG+ MS+++ L N +K++ + E + GN+CRCTGYRPI
Sbjct: 5 HASQCGFCTPGMCMSIFSSLVNADKSKKPAPPKGFSKLSISEAERSFSGNMCRCTGYRPI 64
>05_05_0196 +
23152389-23152658,23153042-23153092,23153167-23153240,
23153356-23153443,23153541-23153738,23153824-23153895,
23154034-23154093,23154194-23154370,23154975-23155064
Length = 359
Score = 32.3 bits (70), Expect = 0.19
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +2
Query: 191 NACLISVCAMHGLAVTTVXGIGSTQDRL--HPVQERIAKSHGSQCGFCTPGIVMSMYALL 364
N + C HG+ VT +GS++ L PV E+IA TPG V+ +AL
Sbjct: 236 NNKIFEACKKHGIHVTAYSPLGSSEKNLAHDPVVEKIANKLNK-----TPGQVLIKWALQ 290
Query: 365 RNNNKIAYEDIEGALQGNL 421
R + I + ++ N+
Sbjct: 291 RGTSVIPKSTKDERIKENM 309
>03_04_0011 +
16398093-16398170,16401321-16401806,16401892-16402380,
16402810-16403466
Length = 569
Score = 29.1 bits (62), Expect = 1.7
Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
Frame = +2
Query: 173 INHIAV-NACLISVCAMHGLAVTTVXGIGS---TQDRLHPVQERIAKSHGSQCGFCTPGI 340
I H+ + NA V G+ + TV G + T +R++ ++E+ + +Q G
Sbjct: 116 IPHLVILNATSGEVYTEDGVELVTVHGTEAYPFTTERINELKEQEKAAKDNQTVQSVLGT 175
Query: 341 VMSMYALLRNNNKIAYEDIEGALQGNLCRCTGYRPI 448
Y L +++ D+EG G GY P+
Sbjct: 176 PTRDYLLSNKGDRVPISDLEGKYVGLCFVVNGYGPV 211
>10_08_0330 - 16816497-16819952
Length = 1151
Score = 27.9 bits (59), Expect = 4.0
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -2
Query: 308 REILQFSLGQDVIDLVWNRYXXXXXXLTHALHIQI 204
RE+LQ+S D I+ +W T+A+ IQ+
Sbjct: 920 RELLQWSFNHDRINTIWKGKEQIFEIKTYAIDIQL 954
>02_05_0734 + 31318380-31318610,31319422-31319988
Length = 265
Score = 27.9 bits (59), Expect = 4.0
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 299 KSHGSQCGFCTPGIVMSMYALLRNNNKIAYEDIEGALQGN 418
K+ CG PG ++ +AL NN+ AY DI L GN
Sbjct: 182 KTVDDHCGLWLPGNIL--HALFNNNS--AYHDIHHQLYGN 217
>07_03_1753 + 29224766-29224911,29225045-29225147
Length = 82
Score = 27.1 bits (57), Expect = 7.0
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -1
Query: 162 FFKYFETMTVQAPQPPSPH 106
F+++ E T++ PQPP+PH
Sbjct: 28 FYRHDEEGTLKWPQPPNPH 46
>02_05_0033 +
25250312-25250563,25251469-25251540,25251925-25252069,
25253449-25253558,25253665-25254079,25254166-25254413
Length = 413
Score = 27.1 bits (57), Expect = 7.0
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +2
Query: 149 KYLKNEDRINHIAVNA-CLISVCAMHGLAVTTVXGIGSTQDRLHPVQERIAKSHGSQCGF 325
+YL E+ H + S A+ L V +V G + D ++A++ G C F
Sbjct: 49 QYLSKEEAAVHARMRRRTQFSRTAVRNLIVLSVLAEGCSTDLF---VMKLAEN-GRSCFF 104
Query: 326 CTPGIVMSMYALLRNNNK 379
C +V +YA++ N+
Sbjct: 105 CQAAVVAIVYAIMTTRNE 122
>01_01_0975 -
7686297-7686458,7687117-7687245,7687754-7687831,
7688011-7688469,7690648-7690788,7691771-7692421
Length = 539
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = -1
Query: 147 ETMTVQAPQPPSPH--PYLVPV 88
E T AP PPSPH P L+PV
Sbjct: 360 EPTTAAAPPPPSPHAQPPLLPV 381
>08_02_0552 - 18540330-18540590
Length = 86
Score = 26.6 bits (56), Expect = 9.2
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -1
Query: 429 HLHKLPCKAPSISSYAILLLFLSKAYID 346
H LP APS ++ AIL++ L+KA +D
Sbjct: 41 HPDPLPIAAPSEAAAAILVIDLAKADVD 68
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,084,881
Number of Sequences: 37544
Number of extensions: 240552
Number of successful extensions: 747
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 738
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 871620292
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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