Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31753
(363 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 122 7e-29
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 70 6e-13
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 69 1e-12
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 63 6e-11
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 60 5e-10
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 54 5e-08
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 52 2e-07
10_08_0620 - 19321612-19323237 46 9e-06
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 40 5e-04
02_01_0024 + 159595-159801,159892-160017,160201-160338,160431-16... 34 0.030
06_01_0097 - 810283-810296,810398-810521,810974-811066,811144-81... 33 0.052
03_01_0305 - 2383187-2383298,2383606-2383684,2383762-2383867,238... 33 0.069
05_01_0123 - 846081-846167,846264-846404,846749-846866,847382-84... 30 0.49
05_06_0240 - 26629218-26629323,26629412-26629490,26629656-266297... 29 0.85
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 28 2.0
12_01_0453 - 3572745-3572918,3573370-3573430,3573646-3573783,357... 27 6.0
01_06_0938 - 33179237-33179362,33179485-33179668,33180114-331804... 27 6.0
09_04_0168 - 15295442-15295477,15295478-15295552,15295660-152957... 26 7.9
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 122 bits (295), Expect = 7e-29
Identities = 60/105 (57%), Positives = 76/105 (72%)
Frame = +3
Query: 39 AISLLNPKAEFARAAQALAVNISAAKGIEDVMKTNLGPKGTMKMLVSGAGDIKITKDGNV 218
++ +LNP AE + AL +NI+AAKG++DV+KTNLGPKGT+KMLV GAGDIK+TKDGN
Sbjct: 2 SLRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNT 61
Query: 219 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQAD 353
LL EMQIQ+PTA +IAR VL IGEL+KQ++
Sbjct: 62 LLKEMQIQNPTAIMIARTAVAQDDTSGDGTTSTVLFIGELMKQSE 106
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 69.7 bits (163), Expect = 6e-13
Identities = 32/88 (36%), Positives = 48/88 (54%)
Frame = +3
Query: 99 NISAAKGIEDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 278
NI AAK + D+++T LGP+ +KML+ +G I +T DGN +L E+ I HP A +
Sbjct: 26 NIQAAKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILREIDIAHPAAKSMIELSR 85
Query: 279 XXXXXXXXXXXXXVLLIGELLKQADIFI 362
++L GE+L A+ FI
Sbjct: 86 TQDEEVGDGTTSVIVLAGEMLHVAEAFI 113
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 68.9 bits (161), Expect = 1e-12
Identities = 32/88 (36%), Positives = 47/88 (53%)
Frame = +3
Query: 99 NISAAKGIEDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 278
NI AAK + D+++T LGP+ +KML+ AG I +T DGN +L E+ + HP A +
Sbjct: 26 NIQAAKAVADIIRTTLGPQSMLKMLLDAAGGIVVTNDGNCILRELDLAHPAAKSMIELSR 85
Query: 279 XXXXXXXXXXXXXVLLIGELLKQADIFI 362
++L GE+L A FI
Sbjct: 86 TQDEEVGDGTTSVIVLAGEMLHVAQAFI 113
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 63.3 bits (147), Expect = 6e-11
Identities = 32/93 (34%), Positives = 48/93 (51%)
Frame = +3
Query: 75 RAAQALAVNISAAKGIEDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTA 254
R A NI+A K + +++T+LGPKG KML S GD+ IT DG +L +M + + A
Sbjct: 25 RGLDAQKANIAAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIA 84
Query: 255 SLIARXXXXXXXXXXXXXXXXVLLIGELLKQAD 353
L+ V++ G LL+QA+
Sbjct: 85 KLMVELSCSQDYEIGDGTTGVVVMAGSLLEQAE 117
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 60.1 bits (139), Expect = 5e-10
Identities = 29/85 (34%), Positives = 47/85 (55%)
Frame = +3
Query: 96 VNISAAKGIEDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXX 275
+NI+AA+ + D ++T+LGP+G KM+ SG ++ IT DG +L M + P A ++A
Sbjct: 30 LNIAAARAVADAVRTSLGPRGMDKMISSGEQEVIITNDGATILSRMSLLQPAARMLAELS 89
Query: 276 XXXXXXXXXXXXXXVLLIGELLKQA 350
V+L G LL++A
Sbjct: 90 RSQDAAAGDGTTTVVVLAGSLLRRA 114
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 53.6 bits (123), Expect = 5e-08
Identities = 24/93 (25%), Positives = 48/93 (51%)
Frame = +3
Query: 84 QALAVNISAAKGIEDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLI 263
+A+ NI A + + + +T+LGP G KM+++ + +T D +++E+++QHP A ++
Sbjct: 22 EAVLKNIDACRELSAITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKIL 81
Query: 264 ARXXXXXXXXXXXXXXXXVLLIGELLKQADIFI 362
+ GELL++A+ I
Sbjct: 82 VLAGRAQQEEIGDGANLTISFAGELLEKAEELI 114
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 51.6 bits (118), Expect = 2e-07
Identities = 29/107 (27%), Positives = 48/107 (44%)
Frame = +3
Query: 42 ISLLNPKAEFARAAQALAVNISAAKGIEDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVL 221
I LL + ++ + NI+A + D ++T LGP+G K++ G I+ DG +
Sbjct: 9 IILLKEGTDTSQGRAQVVSNINACTVVADTVRTTLGPRGMDKLIHDDKGGTTISNDGATI 68
Query: 222 LHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFI 362
+ + I HP A ++ VLL E LK+A +I
Sbjct: 69 MRLLDIIHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLKEAKPYI 115
>10_08_0620 - 19321612-19323237
Length = 541
Score = 46.0 bits (104), Expect = 9e-06
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Frame = +3
Query: 96 VNISAAKGIEDVMKTNLGPKGTMKMLVSGA--GD--IKITKDGNVLLHEMQIQHPTASLI 263
+NI+A + + +T+LGP+G KM+ S + GD + IT DG +L M + P A ++
Sbjct: 30 LNIAAGRAVAAAARTSLGPRGMDKMISSSSSGGDQAVIITNDGATILSRMPLLQPAARML 89
Query: 264 ARXXXXXXXXXXXXXXXXVLLIGELLKQA 350
A V+L G LL++A
Sbjct: 90 ADLSRSQDAAAGDGTTTVVVLAGSLLRRA 118
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 40.3 bits (90), Expect = 5e-04
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 168 MLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQ 347
MLV GD+ IT DG +L ++++HP A ++ V++ ELLK+
Sbjct: 1 MLVDDIGDVTITNDGATILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIIAAELLKR 60
Query: 348 AD 353
+
Sbjct: 61 GN 62
>02_01_0024 +
159595-159801,159892-160017,160201-160338,160431-160526,
160958-161200,161249-161537,161612-161781,161975-162052,
162156-162227,162345-162449,162555-162647,162737-162829,
163109-163235,163317-163330
Length = 616
Score = 34.3 bits (75), Expect = 0.030
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +3
Query: 120 IEDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIAR 269
+ D++ LGPKG +L S G KI DG + E++++ P ++ A+
Sbjct: 75 LADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAK 124
>06_01_0097 -
810283-810296,810398-810521,810974-811066,811144-811236,
811410-811514,811661-811732,811857-811934,812210-812379,
812507-812741,812832-813074,813243-813338,813445-813582,
814014-814139,814235-814453
Length = 601
Score = 33.5 bits (73), Expect = 0.052
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +3
Query: 120 IEDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIAR 269
+ D++ LGPKG +L S G +I DG + E++++ P ++ A+
Sbjct: 79 LADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAK 128
>03_01_0305 -
2383187-2383298,2383606-2383684,2383762-2383867,
2383941-2384044,2384141-2384240,2384533-2384628,
2384724-2384801,2385355-2385423,2385511-2385591,
2385670-2385759,2385859-2385945,2386022-2386126,
2386591-2386686,2386796-2386971,2387225-2387384,
2387898-2388029,2388236-2388260,2389023-2389174
Length = 615
Score = 33.1 bits (72), Expect = 0.069
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +3
Query: 84 QALAVNISAAKGIEDVMKTNLGPKGTMKMLVSGAGDIKITKDG 212
+A A+ + + + D +K +GPKG ++ G K+TKDG
Sbjct: 80 EARALMLRGVEELADAVKVTMGPKGRTVVIEQSFGAPKVTKDG 122
>05_01_0123 -
846081-846167,846264-846404,846749-846866,847382-847528,
848439-848441,848590-848627,848808-848851,848959-849016
Length = 211
Score = 30.3 bits (65), Expect = 0.49
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +3
Query: 105 SAAKGIEDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLI 263
SAA G+E V + L K+ V GD K D +V+ ++ ++PT SL+
Sbjct: 37 SAASGVETVPQLFLKISPEGKVPVFNGGDGKWIPDSDVITQVIEEKYPTPSLV 89
>05_06_0240 -
26629218-26629323,26629412-26629490,26629656-26629761,
26629844-26629947,26630069-26630168,26630256-26630351,
26630464-26630541,26630603-26630671,26630766-26630846,
26630879-26630935,26631016-26631105,26631192-26631278,
26631690-26631794,26631899-26631994,26632222-26632397,
26632847-26633006,26633151-26633600
Length = 679
Score = 29.5 bits (63), Expect = 0.85
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +3
Query: 66 EFARAAQALAVNISAAKGIEDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQ 242
E A A A + + D +K +GPKG ++ K+TKDG + ++ +
Sbjct: 121 EVAFGVGARAALLQGVNDLADAVKVTMGPKGRNVIIERSHRAPKVTKDGVTVAKSIEFE 179
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 28.3 bits (60), Expect = 2.0
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +3
Query: 18 NVLNEMAAISLLNPKAEFAR--AAQALAVNISAAKGIEDVMKTNLGPKGTMKMLVSG 182
N L +AA+ LNP AR AA A A + A D +T L P+ + K+ +G
Sbjct: 321 NPLKNVAAVLKLNPYFGTARKMAALAEAARVKARTEKLDSKRTKLSPEESSKIKAAG 377
>12_01_0453 -
3572745-3572918,3573370-3573430,3573646-3573783,
3573882-3574003,3574078-3574233,3575337-3575477,
3575643-3576044
Length = 397
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 190 SPAPETNIFIVPFGPRLVFITSSIPLAADIFT 95
S P F+ PF P L +TSS+ LA +F+
Sbjct: 247 SAFPSVVKFVTPFAPLLAVLTSSL-LACSVFS 277
>01_06_0938 -
33179237-33179362,33179485-33179668,33180114-33180409,
33180702-33180821,33180931-33181018,33181352-33181426,
33181565-33181632,33181770-33181852,33182010-33182058,
33183006-33183126,33183225-33183310,33183782-33183910,
33184033-33184155,33184277-33184486,33185217-33185240
Length = 593
Score = 26.6 bits (56), Expect = 6.0
Identities = 31/101 (30%), Positives = 41/101 (40%), Gaps = 16/101 (15%)
Frame = +3
Query: 3 LIETENVLNEMAAISLLNPKAEFARAAQALAVNISAAKGIEDVMKTNLG--------PKG 158
L+E + + LL+PK R AQA V KG D L PK
Sbjct: 365 LLEIVGFKDAWHGLVLLSPKGHGTRLAQAHRVQFKFHKGATDHAYMRLDGEPWNQPLPKD 424
Query: 159 TMKMLV--SGAGDIKITKDGNVL---LHE---MQIQHPTAS 257
K+LV S AG +K+ N + +HE M HP +S
Sbjct: 425 DGKVLVEISHAGQVKMLATKNCIAKGIHEALSMSTVHPESS 465
>09_04_0168 -
15295442-15295477,15295478-15295552,15295660-15295722,
15296095-15296319,15296421-15296562,15296678-15296839,
15298148-15298320,15300352-15300882
Length = 468
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = -3
Query: 190 SPAPETNIFIVPFGP-RLVFITSSI 119
+PAP +N F VP GP R V ++ S+
Sbjct: 38 APAPSSNAFCVPRGPARAVAVSVSV 62
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,240,072
Number of Sequences: 37544
Number of extensions: 173966
Number of successful extensions: 383
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 382
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 566473892
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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