Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31739
         (525 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical...    29   2.0  
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical...    29   2.0  
U50312-5|AAA92322.1|  369|Caenorhabditis elegans Hypothetical pr...    28   3.6  
AF016430-4|AAB65372.1|  594|Caenorhabditis elegans Hypothetical ...    28   3.6  
Z81562-7|CAB04561.1|  367|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z92806-6|CAE17878.1|  268|Caenorhabditis elegans Hypothetical pr...    27   8.2  

>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
           protein Y57A10A.18b protein.
          Length = 1459

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +1

Query: 328 SLGKKFHINVKCKNNLRKTRRTFVVNNQRT 417
           SL  +F   V C NN  ++ RT + N+QRT
Sbjct: 704 SLDHEFRETVSCVNNCLESARTALTNSQRT 733


>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
           protein Y57A10A.18a protein.
          Length = 1456

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +1

Query: 328 SLGKKFHINVKCKNNLRKTRRTFVVNNQRT 417
           SL  +F   V C NN  ++ RT + N+QRT
Sbjct: 704 SLDHEFRETVSCVNNCLESARTALTNSQRT 733


>U50312-5|AAA92322.1|  369|Caenorhabditis elegans Hypothetical
           protein B0222.5 protein.
          Length = 369

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = -3

Query: 313 SVKYFFRKSGYPTFWLWRRG*CSGHEPSVRPTSNCLCNVCLQIDYVC 173
           S++Y+F    +  F    +G C G++ S R +S C  +  LQ  + C
Sbjct: 204 SIRYWFDVETFQCFPFEHKG-CGGNQNSYRTSSECYFDCVLQDYFSC 249


>AF016430-4|AAB65372.1|  594|Caenorhabditis elegans Hypothetical
           protein C05C8.5 protein.
          Length = 594

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 15/57 (26%), Positives = 30/57 (52%)
 Frame = -2

Query: 413 RWLFTTNVRLVLRKLFLHLTLI*NFLPRLKVTTFCKVFF*KEWLSDLLALASRMMFW 243
           RW+  ++ R VL+ L + + +  +F     ++ F   FF K+W+     ++ R +FW
Sbjct: 94  RWVSLSHHRNVLQNLVVRVNVDDDFFTTTNLS-FLSEFFEKQWIELDSDVSDRGLFW 149


>Z81562-7|CAB04561.1|  367|Caenorhabditis elegans Hypothetical
           protein K03D7.11 protein.
          Length = 367

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 18/64 (28%), Positives = 30/64 (46%)
 Frame = -1

Query: 372 IIFTFNVNMKFFA*TESNNFL*SIFLERVVIRPFGSGVEDDVLGTSRRSGRPRTVSVTFV 193
           ++  + VN +    T++   L  + L  ++I PFG+     +  TS R   P T  +TF 
Sbjct: 143 LVMRYLVNGRINCWTDAKYGLKIVLLITLLILPFGASNYSKLSSTSVREWTPFTNCITFS 202

Query: 192 YKST 181
             ST
Sbjct: 203 GNST 206


>Z92806-6|CAE17878.1|  268|Caenorhabditis elegans Hypothetical
           protein K10G4.9 protein.
          Length = 268

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 24/89 (26%), Positives = 39/89 (43%)
 Frame = -1

Query: 447 NTSSTASPNTGPLVVYNKCTPSFT*IIFTFNVNMKFFA*TESNNFL*SIFLERVVIRPFG 268
           N S++ +  T  + V+     +    +  + VN++    T+S   L  + L  + I PFG
Sbjct: 117 NVSASFTRLTEKISVWYAVAIAVIRTLMRYPVNVRINCLTQSTYGLRIVLLITLSIIPFG 176

Query: 267 SGVEDDVLGTSRRSGRPRTVSVTFVYKST 181
           +     +  TS R   P T  VTF   ST
Sbjct: 177 ALSYFKLSSTSDRGWTPFTNCVTFSENST 205


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,817,474
Number of Sequences: 27780
Number of extensions: 211976
Number of successful extensions: 615
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 615
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)