Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31732
         (516 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089607-1|AAL90345.1|  539|Drosophila melanogaster RE21692p pro...    28   6.5  
AE014296-2102|AAF49952.1|  539|Drosophila melanogaster CG5642-PA...    28   6.5  
AE014296-560|AAN11529.1| 1035|Drosophila melanogaster CG14955-PB...    28   6.5  
AE014296-559|AAF47715.2|  938|Drosophila melanogaster CG14955-PA...    28   6.5  

>AY089607-1|AAL90345.1|  539|Drosophila melanogaster RE21692p
           protein.
          Length = 539

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = -1

Query: 342 QYLDYSQFDNRRQEQKFDN**YACVCASNTWYVVCVM 232
           Q+ +++Q+  R  E+  D     CV  SN W ++C++
Sbjct: 163 QFQNFAQYRARLTEKSQDEIQQLCVNHSNEWSILCIL 199


>AE014296-2102|AAF49952.1|  539|Drosophila melanogaster CG5642-PA
           protein.
          Length = 539

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = -1

Query: 342 QYLDYSQFDNRRQEQKFDN**YACVCASNTWYVVCVM 232
           Q+ +++Q+  R  E+  D     CV  SN W ++C++
Sbjct: 163 QFQNFAQYRARLTEKSQDEIQQLCVNHSNEWSILCIL 199


>AE014296-560|AAN11529.1| 1035|Drosophila melanogaster CG14955-PB,
           isoform B protein.
          Length = 1035

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = +3

Query: 306 DVCCQIENSLNIVWLY-*FFYSVSLGEICDYRSIK*NHNSVQTYYTIPINYSRISTTAGP 482
           D+C +I   +N +W +   F S+ L  IC    ++   NS++     P++Y   +  A  
Sbjct: 675 DLCNRIAKPMNAIWFWLLLFSSLLLPTICCTHFLRSRLNSLKHSVATPVSYGESNFMAPG 734

Query: 483 LVRL 494
           ++ L
Sbjct: 735 ILPL 738


>AE014296-559|AAF47715.2|  938|Drosophila melanogaster CG14955-PA,
           isoform A protein.
          Length = 938

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = +3

Query: 306 DVCCQIENSLNIVWLY-*FFYSVSLGEICDYRSIK*NHNSVQTYYTIPINYSRISTTAGP 482
           D+C +I   +N +W +   F S+ L  IC    ++   NS++     P++Y   +  A  
Sbjct: 578 DLCNRIAKPMNAIWFWLLLFSSLLLPTICCTHFLRSRLNSLKHSVATPVSYGESNFMAPG 637

Query: 483 LVRL 494
           ++ L
Sbjct: 638 ILPL 641


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,539,697
Number of Sequences: 53049
Number of extensions: 363797
Number of successful extensions: 672
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 672
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)