Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31732
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23528-8|AAK31386.2|  293|Caenorhabditis elegans Hypothetical pr...    29   1.5  
Z81520-1|CAB04223.1|  399|Caenorhabditis elegans Hypothetical pr...    29   2.0  
U40945-1|AAA81719.2|  656|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z70307-7|CAA94336.2|  531|Caenorhabditis elegans Hypothetical pr...    28   3.4  
Z68882-12|CAA93103.2|  204|Caenorhabditis elegans Hypothetical p...    27   6.0  

>U23528-8|AAK31386.2|  293|Caenorhabditis elegans Hypothetical
           protein B0034.5 protein.
          Length = 293

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
 Frame = -3

Query: 334 RLFSI*QQTSRTKV*QLIVCMR-VCVKYMVCSVCNVF-----FIDLMYLLCIILKKY 182
           R FS+  Q SRT V Q    M  +CV Y++ +V NVF     FID+  L    L++Y
Sbjct: 179 RRFSLRMQ-SRTNVRQATATMLFICVIYLISNVVNVFITAWEFIDIESLQTRFLEEY 234


>Z81520-1|CAB04223.1|  399|Caenorhabditis elegans Hypothetical
           protein F31B9.1 protein.
          Length = 399

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -2

Query: 356 LIKPNNI*TILNLTTDVKNKSLTINSMHACVRQ 258
           +I PNN+ T++  TT++ N  LT N     + Q
Sbjct: 1   MIDPNNMTTVIEKTTEIVNSVLTSNESDGVLEQ 33


>U40945-1|AAA81719.2|  656|Caenorhabditis elegans Hypothetical
           protein F10D7.1 protein.
          Length = 656

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = -3

Query: 280 VCMRVCVKYMVC-SVCNVFFIDLMYLLCIILKKY*RCALLLYILYKCGKFHA 128
           V +R+CV  + C ++C++ +I   YL+ I    +  CA LL  + K   F A
Sbjct: 50  VNLRLCVFLLACDALCSLCYI-FTYLINIFFSHFSNCASLLLEVIKMSTFTA 100


>Z70307-7|CAA94336.2|  531|Caenorhabditis elegans Hypothetical
           protein C39E9.7 protein.
          Length = 531

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 17/56 (30%), Positives = 26/56 (46%)
 Frame = -3

Query: 211 YLLCIILKKY*RCALLLYILYKCGKFHAPLSAQFS*KGIQSFCFTY*YIDNIYIFP 44
           YLL IIL+ +  C+L  +I Y C      +   F    +    F Y +I  I++ P
Sbjct: 186 YLLAIILRIFQGCSLAAFIPYIC---KLSVFIPFDHIAVPIIVFAYSHISEIFVHP 238


>Z68882-12|CAA93103.2|  204|Caenorhabditis elegans Hypothetical
           protein C47E12.9 protein.
          Length = 204

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +1

Query: 85  KNFVS-LFTKIARTEEHEISHTYREYREEVHNANIFLK 195
           KNF    F KIA     E++  + +  EEV  ++ FLK
Sbjct: 155 KNFQKCFFRKIAENYSSEVAQKFEDLSEEVIESDFFLK 192


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,815,812
Number of Sequences: 27780
Number of extensions: 217746
Number of successful extensions: 479
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 479
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)