Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31717
         (600 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41109-12|AAB37043.1|  451|Caenorhabditis elegans Hypothetical p...    29   2.5  
Z66514-4|CAH10807.1|  626|Caenorhabditis elegans Hypothetical pr...    28   4.4  
AL021481-7|CAA16331.3|  629|Caenorhabditis elegans Hypothetical ...    28   4.4  
AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical ...    28   4.4  
AL034393-11|CAA22324.2| 2417|Caenorhabditis elegans Hypothetical...    28   5.9  
AJ250261-1|CAB59919.1| 2417|Caenorhabditis elegans hypothetical ...    28   5.9  
AF067608-1|AAC17654.2|  544|Caenorhabditis elegans Hypothetical ...    28   5.9  

>U41109-12|AAB37043.1|  451|Caenorhabditis elegans Hypothetical
           protein F52E1.10 protein.
          Length = 451

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = -2

Query: 512 G*FQENSNNATSNCFLCIIIKNLAPLFKRDPQKLDFI-VNS*NAL-HVNYKIR 360
           G  +E  N  T+N ++   ++ +  LF+ DP ++ F+ +N  ++L H  Y  R
Sbjct: 161 GSLKEAMNRGTNNDYIVTAVRCMQTLFRFDPYRVSFVNINGYDSLTHALYSTR 213


>Z66514-4|CAH10807.1|  626|Caenorhabditis elegans Hypothetical
           protein K01A11.5 protein.
          Length = 626

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 510 SKYSLKFIPHDRDLTWYLLIK 572
           S Y+L F PHD+ L W  L+K
Sbjct: 491 SIYTLSFAPHDKVLLWLRLLK 511


>AL021481-7|CAA16331.3|  629|Caenorhabditis elegans Hypothetical
           protein Y43F4B.2 protein.
          Length = 629

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 510 SKYSLKFIPHDRDLTWYLLIK 572
           S Y+L F PHD+ L W  L+K
Sbjct: 474 SIYTLSFAPHDKVLLWLRLLK 494


>AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical
            protein Y20F4.4 protein.
          Length = 1319

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 510  SKYSLKFIPHDRDLTWYLLIK 572
            S Y+L F PHD+ L W  L+K
Sbjct: 1014 SIYTLSFAPHDKVLLWLRLLK 1034


>AL034393-11|CAA22324.2| 2417|Caenorhabditis elegans Hypothetical
           protein Y18D10A.13 protein.
          Length = 2417

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +2

Query: 470 NSCW*RCLSFLGTIQIFFKIYTTRQRFNMVP 562
           ++C  +CLS L  I   F+IYTTR+  +++P
Sbjct: 624 DACLSQCLSALSAI---FEIYTTRREASLIP 651


>AJ250261-1|CAB59919.1| 2417|Caenorhabditis elegans hypothetical
           protein protein.
          Length = 2417

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +2

Query: 470 NSCW*RCLSFLGTIQIFFKIYTTRQRFNMVP 562
           ++C  +CLS L  I   F+IYTTR+  +++P
Sbjct: 624 DACLSQCLSALSAI---FEIYTTRREASLIP 651


>AF067608-1|AAC17654.2|  544|Caenorhabditis elegans Hypothetical
           protein B0511.6 protein.
          Length = 544

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -3

Query: 325 LVLIAMYPQK*SKSRHLMVFFLECNSALNTHTRLRY 218
           L+L+  + +K +K++ +MVFF  CNS    H  L Y
Sbjct: 302 LLLLFTFLKK-NKTKKVMVFFSSCNSVKFHHELLNY 336


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,079,418
Number of Sequences: 27780
Number of extensions: 261783
Number of successful extensions: 510
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 510
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)