Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31714
         (689 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    27   0.22 
AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    23   2.7  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    23   2.7  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       23   3.6  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    23   3.6  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    22   4.8  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    22   4.8  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   6.3  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    22   6.3  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    21   8.4  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   8.4  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 440 CWHCFYLSLFYVHYHKYTT 384
           CWHCF  + + +  HK  T
Sbjct: 606 CWHCFNCTQYQIRDHKDVT 624


>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 393 IHNNNSLRNQNMK 355
           IHNNN+ +N N K
Sbjct: 323 IHNNNNYKNYNKK 335


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 393 IHNNNSLRNQNMKQTF 346
           IHNNN+  N N K+ +
Sbjct: 312 IHNNNNYNNYNNKKLY 327


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +1

Query: 64  VETFKLIGSKNVIKDFVKILSMFKKKREQKNH 159
           +E+F+  G +N++ D +K  S +KK    + H
Sbjct: 195 IESFEAAGLRNIVLDNIK-KSGYKKPTPVQKH 225


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -3

Query: 393 IHNNNSLRNQNMKQTFRS*DCRLNILNKKSIDYRSLS 283
           IHNNN+  N N    + + +   N  N K + Y  ++
Sbjct: 323 IHNNNNYNNNNYNNNYNNYN-NNNYNNYKKLYYNIIN 358


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 387 NNNSLRNQNMKQTFRS*DCRLNILNKK 307
           +NN++ N N K  + + +   N  NKK
Sbjct: 85  SNNTIHNNNYKYNYNNNNYNNNNYNKK 111


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 387 NNNSLRNQNMKQTFRS*DCRLNILNKK 307
           +NN++ N N K  + + +   N  NKK
Sbjct: 85  SNNTIHNNNYKYNYNNNNYNNNNYNKK 111


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 58  CIVETFKLIGSKNVI 102
           C+VE F  + S+N+I
Sbjct: 474 CVVEAFDYLHSRNII 488


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 583 NFNQNIQQFIATIFPSLIMY 524
           N+N+NI++F  +  P   MY
Sbjct: 546 NYNENIERFFKSKPPVATMY 565


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +2

Query: 425 KNNANNKYNLFLKPYGSILY 484
           K N NNKYN     Y   LY
Sbjct: 97  KYNYNNKYNYNNNNYNKKLY 116


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 559 FIATIFPSLIMYVCLFR 509
           F++ + P+LI+Y   FR
Sbjct: 15  FLSLLIPALILYFIYFR 31


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,929
Number of Sequences: 438
Number of extensions: 2989
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)