Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31710
         (620 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81595-6|CAB04754.2|  295|Caenorhabditis elegans Hypothetical pr...    87   7e-18
Z81595-5|CAB04755.2|  289|Caenorhabditis elegans Hypothetical pr...    87   7e-18
EF445109-1|ABQ01576.1|  273|Caenorhabditis elegans scramblase 1 ...    87   7e-18
Z82084-5|CAB04981.1|  265|Caenorhabditis elegans Hypothetical pr...    85   4e-17
EF445110-1|ABQ01577.1|  265|Caenorhabditis elegans scramblase 2 ...    85   4e-17
EF445111-1|ABQ01578.1|  251|Caenorhabditis elegans scramblase 3 ...    73   2e-13
AF078785-2|AAC27093.1|  266|Caenorhabditis elegans Hypothetical ...    62   2e-10
U55857-4|AAA98029.1|  301|Caenorhabditis elegans Hypothetical pr...    60   1e-09
U55857-3|AAA98028.1|  303|Caenorhabditis elegans Hypothetical pr...    58   4e-09
AL117200-5|CAB55057.1|  293|Caenorhabditis elegans Hypothetical ...    58   4e-09
Z81530-7|CAB04311.2|  292|Caenorhabditis elegans Hypothetical pr...    58   5e-09
Z81498-3|CAB04084.3|  260|Caenorhabditis elegans Hypothetical pr...    46   2e-05
EF445112-1|ABQ01579.1|  265|Caenorhabditis elegans scramblase 4 ...    46   2e-05
Z80215-1|CAB02268.2|  282|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z69883-3|CAA93741.2|  450|Caenorhabditis elegans Hypothetical pr...    27   8.2  

>Z81595-6|CAB04754.2|  295|Caenorhabditis elegans Hypothetical
           protein T22H2.5b protein.
          Length = 295

 Score = 87.4 bits (207), Expect = 7e-18
 Identities = 40/60 (66%), Positives = 46/60 (76%)
 Frame = +3

Query: 6   TKVGKITKSWSGFAREAFTDADNFGISFPMDLDVKIKAVLLGACFLIDFMFFEKGNNNRN 185
           T VG ITK W G  REAFTDAD F ++FP DLDVK+K VL+GA FLIDFM FE+ + NRN
Sbjct: 227 TVVGAITKKWGGCFREAFTDADTFAVNFPGDLDVKLKGVLIGATFLIDFMEFEQQSQNRN 286


>Z81595-5|CAB04755.2|  289|Caenorhabditis elegans Hypothetical
           protein T22H2.5a protein.
          Length = 289

 Score = 87.4 bits (207), Expect = 7e-18
 Identities = 40/60 (66%), Positives = 46/60 (76%)
 Frame = +3

Query: 6   TKVGKITKSWSGFAREAFTDADNFGISFPMDLDVKIKAVLLGACFLIDFMFFEKGNNNRN 185
           T VG ITK W G  REAFTDAD F ++FP DLDVK+K VL+GA FLIDFM FE+ + NRN
Sbjct: 227 TVVGAITKKWGGCFREAFTDADTFAVNFPGDLDVKLKGVLIGATFLIDFMEFEQQSQNRN 286


>EF445109-1|ABQ01576.1|  273|Caenorhabditis elegans scramblase 1
           protein.
          Length = 273

 Score = 87.4 bits (207), Expect = 7e-18
 Identities = 40/60 (66%), Positives = 46/60 (76%)
 Frame = +3

Query: 6   TKVGKITKSWSGFAREAFTDADNFGISFPMDLDVKIKAVLLGACFLIDFMFFEKGNNNRN 185
           T VG ITK W G  REAFTDAD F ++FP DLDVK+K VL+GA FLIDFM FE+ + NRN
Sbjct: 211 TVVGAITKKWGGCFREAFTDADTFAVNFPGDLDVKLKGVLIGATFLIDFMEFEQQSQNRN 270


>Z82084-5|CAB04981.1|  265|Caenorhabditis elegans Hypothetical
           protein ZK1053.5 protein.
          Length = 265

 Score = 85.0 bits (201), Expect = 4e-17
 Identities = 36/54 (66%), Positives = 43/54 (79%)
 Frame = +3

Query: 12  VGKITKSWSGFAREAFTDADNFGISFPMDLDVKIKAVLLGACFLIDFMFFEKGN 173
           +G ITK W G  REAFTDAD F ++FP+DLDVK+KA+LLGA FLIDF+ FE  N
Sbjct: 212 IGSITKKWGGLLREAFTDADTFAVTFPIDLDVKLKAILLGATFLIDFVEFENNN 265


>EF445110-1|ABQ01577.1|  265|Caenorhabditis elegans scramblase 2
           protein.
          Length = 265

 Score = 85.0 bits (201), Expect = 4e-17
 Identities = 36/54 (66%), Positives = 43/54 (79%)
 Frame = +3

Query: 12  VGKITKSWSGFAREAFTDADNFGISFPMDLDVKIKAVLLGACFLIDFMFFEKGN 173
           +G ITK W G  REAFTDAD F ++FP+DLDVK+KA+LLGA FLIDF+ FE  N
Sbjct: 212 IGSITKKWGGLLREAFTDADTFAVTFPIDLDVKLKAILLGATFLIDFVEFENNN 265


>EF445111-1|ABQ01578.1|  251|Caenorhabditis elegans scramblase 3
           protein.
          Length = 251

 Score = 72.9 bits (171), Expect = 2e-13
 Identities = 31/52 (59%), Positives = 38/52 (73%)
 Frame = +3

Query: 9   KVGKITKSWSGFAREAFTDADNFGISFPMDLDVKIKAVLLGACFLIDFMFFE 164
           ++G ITK W G  REA+TDAD F ++FP DLDVK KA+LL   F+IDF  FE
Sbjct: 197 RIGAITKKWGGIIREAYTDADTFAVTFPADLDVKAKALLLATTFVIDFAEFE 248


>AF078785-2|AAC27093.1|  266|Caenorhabditis elegans Hypothetical
           protein C04E12.7 protein.
          Length = 266

 Score = 62.5 bits (145), Expect = 2e-10
 Identities = 26/45 (57%), Positives = 32/45 (71%)
 Frame = +3

Query: 9   KVGKITKSWSGFAREAFTDADNFGISFPMDLDVKIKAVLLGACFL 143
           ++G ITK W G  REA+TDAD F ++FP DLDVK KA+LL    L
Sbjct: 197 RIGAITKKWGGIIREAYTDADTFAVTFPADLDVKAKALLLATTIL 241


>U55857-4|AAA98029.1|  301|Caenorhabditis elegans Hypothetical
           protein K08D10.7 protein.
          Length = 301

 Score = 60.1 bits (139), Expect = 1e-09
 Identities = 26/58 (44%), Positives = 40/58 (68%)
 Frame = +3

Query: 12  VGKITKSWSGFAREAFTDADNFGISFPMDLDVKIKAVLLGACFLIDFMFFEKGNNNRN 185
           VG+I + + GF +E FTDAD + + FPMD+   +K +L+ + FLIDF +FE  N +R+
Sbjct: 231 VGEIVRLYPGFMQEMFTDADTYIVHFPMDMPPILKLLLVTSVFLIDFTYFEDRNQDRH 288


>U55857-3|AAA98028.1|  303|Caenorhabditis elegans Hypothetical
           protein K08D10.8 protein.
          Length = 303

 Score = 58.4 bits (135), Expect = 4e-09
 Identities = 25/58 (43%), Positives = 40/58 (68%)
 Frame = +3

Query: 12  VGKITKSWSGFAREAFTDADNFGISFPMDLDVKIKAVLLGACFLIDFMFFEKGNNNRN 185
           VG+I + + GF +E FTDAD + + FPMD+   +K +L+ + FLIDF +FE  N +++
Sbjct: 233 VGEIVRLYPGFMQEMFTDADTYIVHFPMDMPPILKLLLVTSVFLIDFTYFEDRNQDQH 290


>AL117200-5|CAB55057.1|  293|Caenorhabditis elegans Hypothetical
           protein Y50E8A.9 protein.
          Length = 293

 Score = 58.4 bits (135), Expect = 4e-09
 Identities = 24/59 (40%), Positives = 38/59 (64%)
 Frame = +3

Query: 9   KVGKITKSWSGFAREAFTDADNFGISFPMDLDVKIKAVLLGACFLIDFMFFEKGNNNRN 185
           +VG+I + + G+ +E ++DAD + + FPMDL   +K +L+ + FLIDF FFE      N
Sbjct: 206 RVGEIVRLYPGYMQEMYSDADTYIVHFPMDLPPILKLLLISSVFLIDFTFFENNGQQNN 264


>Z81530-7|CAB04311.2|  292|Caenorhabditis elegans Hypothetical
           protein F46A8.10 protein.
          Length = 292

 Score = 58.0 bits (134), Expect = 5e-09
 Identities = 26/59 (44%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
 Frame = +3

Query: 9   KVGKITKSWSGFAREAFTDADNFGISFPMDLDVKIKAVLLGACFLIDFMFFE-KGNNNR 182
           K+G+I + + GF +E +TDAD + + FP DL   +K +L+ + FLID+ FFE +G N R
Sbjct: 223 KIGEIVRLYPGFMQEWYTDADTYIVHFPPDLPPILKILLISSTFLIDYTFFENRGGNQR 281


>Z81498-3|CAB04084.3|  260|Caenorhabditis elegans Hypothetical
           protein F11A6.2 protein.
          Length = 260

 Score = 46.0 bits (104), Expect = 2e-05
 Identities = 25/53 (47%), Positives = 33/53 (62%)
 Frame = +3

Query: 6   TKVGKITKSWSGFAREAFTDADNFGISFPMDLDVKIKAVLLGACFLIDFMFFE 164
           T++GKI +  +  A E       + I+FP DLDVK+KAVL+GA FLI   F E
Sbjct: 183 TEIGKIIRKTARLAGEPIV-FKKYTINFPTDLDVKLKAVLMGATFLIVNNFLE 234


>EF445112-1|ABQ01579.1|  265|Caenorhabditis elegans scramblase 4
           protein.
          Length = 265

 Score = 46.0 bits (104), Expect = 2e-05
 Identities = 25/53 (47%), Positives = 33/53 (62%)
 Frame = +3

Query: 6   TKVGKITKSWSGFAREAFTDADNFGISFPMDLDVKIKAVLLGACFLIDFMFFE 164
           T++GKI +  +  A E       + I+FP DLDVK+KAVL+GA FLI   F E
Sbjct: 183 TEIGKIIRKTARLAGEPIV-FKKYTINFPTDLDVKLKAVLMGATFLIVNNFLE 234


>Z80215-1|CAB02268.2|  282|Caenorhabditis elegans Hypothetical
           protein C36B1.3 protein.
          Length = 282

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 12/44 (27%), Positives = 19/44 (43%)
 Frame = -1

Query: 203 RNLNSSVAIVVAFFKEHKIYEKTCSKEYSFDFDVQVHRETYPKI 72
           + LN    +   F KEH  +  TC   + +D D  +    YP +
Sbjct: 163 QELNLKAYVKKGFGKEHAKWNPTCGVAFEYDPDNALRHTIYPNV 206


>Z69883-3|CAA93741.2|  450|Caenorhabditis elegans Hypothetical
           protein C27C12.4 protein.
          Length = 450

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/57 (22%), Positives = 30/57 (52%)
 Frame = +2

Query: 347 LYLFVSYVXLINDYYVQSE*MITLSYNFRECCIKLWIIFDRQ*AYASCKGLIYGFYV 517
           L L +S++  ++D + Q++  +T+   F+E  +  + IF    + A+C    Y  ++
Sbjct: 354 LTLIISFLLGVSDAFWQTQIYVTIGQVFKEDPVNAFAIFKFFQSMAACVSFFYSSFL 410


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,418,404
Number of Sequences: 27780
Number of extensions: 267378
Number of successful extensions: 609
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 609
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)