Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31703
         (586 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79604-4|CAB60456.1|  598|Caenorhabditis elegans Hypothetical pr...    31   0.80 
Z71185-4|CAA94909.2|  483|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical ...    28   4.2  
AC006832-7|AAF39999.1|  505|Caenorhabditis elegans Hypothetical ...    27   7.4  

>Z79604-4|CAB60456.1|  598|Caenorhabditis elegans Hypothetical
           protein ZK662.5 protein.
          Length = 598

 Score = 30.7 bits (66), Expect = 0.80
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +2

Query: 272 NITSDLLIYSNNKLYKIFAVNGLVRCVLYLVCRY 373
           N+    L+ SN  +Y +FA NGLV+   Y +C Y
Sbjct: 196 NVRFSNLVCSNQNVYNVFATNGLVK--RYNICFY 227


>Z71185-4|CAA94909.2|  483|Caenorhabditis elegans Hypothetical
           protein C35A5.7 protein.
          Length = 483

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 41  VNLINVFCTFILYCTLST*MRLLLIEIHLT 130
           ++L+N    FI+YC +S   R + I+I LT
Sbjct: 310 LSLLNSAVNFIIYCAMSRKFRAVFIQIFLT 339


>AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical
           protein Y87G2A.5 protein.
          Length = 1050

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = -1

Query: 538 FTDAETARY--WAF*FRDVYVFTTIPDRYANRTGL 440
           FT A T  Y  W + F DVYV T  P  Y + T L
Sbjct: 788 FTQATTVTYNFWLYDFCDVYVETIKPVLYGDNTTL 822


>AC006832-7|AAF39999.1|  505|Caenorhabditis elegans Hypothetical
           protein ZK355.5 protein.
          Length = 505

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 19/67 (28%), Positives = 31/67 (46%)
 Frame = -1

Query: 541 VFTDAETARYWAF*FRDVYVFTTIPDRYANRTGLFIIRSRYIEKQNXIHRADIRAQVPTN 362
           V  DA   RY    F+  Y+F T+  +Y+   GL+     ++   N I   D  A +P  
Sbjct: 366 VVVDANDGRYLYKLFKIKYIFGTLKIQYSKSDGLY-----FLTDLNYIGNLD--ASIPAV 418

Query: 361 KIKNTSY 341
            I++ +Y
Sbjct: 419 LIRSNNY 425


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,023,562
Number of Sequences: 27780
Number of extensions: 238208
Number of successful extensions: 664
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 664
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)