Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31681
(302 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC018708-1|AAH18708.1| 434|Homo sapiens zinc finger CCCH-type c... 28 4.7
AK027357-1|BAB55059.1| 434|Homo sapiens protein ( Homo sapiens ... 28 4.7
Y15572-1|CAA75681.1| 328|Homo sapiens R51H3 protein. 28 6.2
BC014422-1|AAH14422.1| 328|Homo sapiens RAD51-like 3 (S. cerevi... 28 6.2
BC002723-1|AAH02723.1| 209|Homo sapiens RAD51L3 protein protein. 28 6.2
AY623116-1|AAT38112.1| 328|Homo sapiens RAD51-like 3 (S. cerevi... 28 6.2
AL117459-1|CAB55937.1| 173|Homo sapiens hypothetical protein pr... 28 6.2
AK091192-1|BAC03604.1| 156|Homo sapiens protein ( Homo sapiens ... 28 6.2
AF034956-1|AAC39719.1| 289|Homo sapiens RAD51D protein. 28 6.2
AB016225-1|BAA31749.1| 216|Homo sapiens TRAD-d3 protein. 28 6.2
AB013341-1|BAA25914.1| 328|Homo sapiens Trad protein. 28 6.2
Z83689-1|CAB69660.1| 1211|Homo sapiens AF-4 protein. 27 8.1
L25050-1|AAA36642.1| 1206|Homo sapiens serine/proline-rich prote... 27 8.1
L22179-1|AAC37520.1| 2311|Homo sapiens MLL-AF4 der(11) fusion pr... 27 8.1
L13773-1|AAA58360.1| 1210|Homo sapiens AF-4 protein. 27 8.1
L12141-1|AAA58477.1| 347|Homo sapiens fork head-related protein... 27 8.1
BT006720-1|AAP35366.1| 350|Homo sapiens forkhead box A3 protein. 27 8.1
BC114930-1|AAI14931.1| 1211|Homo sapiens AF4/FMR2 family, member... 27 8.1
BC016024-1|AAH16024.1| 350|Homo sapiens forkhead box A3 protein. 27 8.1
BC014001-1|AAH14001.2| 445|Homo sapiens UBX domain containing 8... 27 8.1
BC006145-1|AAH06145.2| 445|Homo sapiens UBX domain containing 8... 27 8.1
BC001069-1|AAH01069.2| 445|Homo sapiens UBX domain containing 8... 27 8.1
AK223473-1|BAD97193.1| 350|Homo sapiens forkhead box A3 variant... 27 8.1
AF176114-1|AAD51980.1| 350|Homo sapiens hepatocyte nuclear fact... 27 8.1
AB088120-1|BAC22491.1| 445|Homo sapiens ETEA protein. 27 8.1
AB020694-1|BAA74910.1| 443|Homo sapiens KIAA0887 protein protein. 27 8.1
>BC018708-1|AAH18708.1| 434|Homo sapiens zinc finger CCCH-type
containing 10 protein.
Length = 434
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Frame = +2
Query: 209 PKPPELSPIYLPVSPVMPV-----QPLTSLTLTQT 298
P P ++P+ + V+PV PV QPL +T++ T
Sbjct: 379 PPPVSMAPVAVSVAPVAPVAVSMAQPLAGITMSHT 413
>AK027357-1|BAB55059.1| 434|Homo sapiens protein ( Homo sapiens
cDNA FLJ14451 fis, clone HEMBB1001834. ).
Length = 434
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Frame = +2
Query: 209 PKPPELSPIYLPVSPVMPV-----QPLTSLTLTQT 298
P P ++P+ + V+PV PV QPL +T++ T
Sbjct: 379 PPPVSMAPVAVSVAPVAPVAVSMAQPLAGITMSHT 413
>Y15572-1|CAA75681.1| 328|Homo sapiens R51H3 protein.
Length = 328
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 43 NEIPRDIDDGKASSVISRAWDYVDDT 120
N I RD D G+ + R+W +V T
Sbjct: 249 NHITRDRDSGRLKPALGRSWSFVPST 274
>BC014422-1|AAH14422.1| 328|Homo sapiens RAD51-like 3 (S.
cerevisiae) protein.
Length = 328
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 43 NEIPRDIDDGKASSVISRAWDYVDDT 120
N I RD D G+ + R+W +V T
Sbjct: 249 NHITRDRDSGRLKPALGRSWSFVPST 274
>BC002723-1|AAH02723.1| 209|Homo sapiens RAD51L3 protein protein.
Length = 209
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 43 NEIPRDIDDGKASSVISRAWDYVDDT 120
N I RD D G+ + R+W +V T
Sbjct: 130 NHITRDRDSGRLKPALGRSWSFVPST 155
>AY623116-1|AAT38112.1| 328|Homo sapiens RAD51-like 3 (S.
cerevisiae) protein.
Length = 328
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 43 NEIPRDIDDGKASSVISRAWDYVDDT 120
N I RD D G+ + R+W +V T
Sbjct: 249 NHITRDRDSGRLKPALGRSWSFVPST 274
>AL117459-1|CAB55937.1| 173|Homo sapiens hypothetical protein
protein.
Length = 173
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 43 NEIPRDIDDGKASSVISRAWDYVDDT 120
N I RD D G+ + R+W +V T
Sbjct: 94 NHITRDRDSGRLKPALGRSWSFVPST 119
>AK091192-1|BAC03604.1| 156|Homo sapiens protein ( Homo sapiens
cDNA FLJ33873 fis, clone CTONG2006942. ).
Length = 156
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +2
Query: 92 HVHGTTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELS 229
HVH + PT P ++ +S V H+ WPKP LS
Sbjct: 98 HVHQASLTLPTSDDPPASASQS------AGITGVSHRAWPKPSSLS 137
>AF034956-1|AAC39719.1| 289|Homo sapiens RAD51D protein.
Length = 289
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 43 NEIPRDIDDGKASSVISRAWDYVDDT 120
N I RD D G+ + R+W +V T
Sbjct: 210 NHITRDRDSGRLKPALGRSWSFVPST 235
>AB016225-1|BAA31749.1| 216|Homo sapiens TRAD-d3 protein.
Length = 216
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 43 NEIPRDIDDGKASSVISRAWDYVDDT 120
N I RD D G+ + R+W +V T
Sbjct: 137 NHITRDRDSGRLKPALGRSWSFVPST 162
>AB013341-1|BAA25914.1| 328|Homo sapiens Trad protein.
Length = 328
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 43 NEIPRDIDDGKASSVISRAWDYVDDT 120
N I RD D G+ + R+W +V T
Sbjct: 249 NHITRDRDSGRLKPALGRSWSFVPST 274
>Z83689-1|CAB69660.1| 1211|Homo sapiens AF-4 protein.
Length = 1211
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 128 ASPSSTFKRS*RTWPARATMQ-VKHQRWPKPPELSPIYLPVSPVM 259
+S SS+ K S +T P+R + Q K + P PP S P P +
Sbjct: 838 SSSSSSHKESSKTKPSRPSSQSSKKEMLPPPPVSSSSQKPAKPAL 882
>L25050-1|AAA36642.1| 1206|Homo sapiens serine/proline-rich protein
protein.
Length = 1206
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 128 ASPSSTFKRS*RTWPARATMQ-VKHQRWPKPPELSPIYLPVSPVM 259
+S SS+ K S +T P+R + Q K + P PP S P P +
Sbjct: 838 SSSSSSHKESSKTKPSRPSSQSSKKEMLPPPPVSSSSQKPAKPAL 882
>L22179-1|AAC37520.1| 2311|Homo sapiens MLL-AF4 der(11) fusion protein
protein.
Length = 2311
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 128 ASPSSTFKRS*RTWPARATMQ-VKHQRWPKPPELSPIYLPVSPVM 259
+S SS+ K S +T P+R + Q K + P PP S P P +
Sbjct: 1938 SSSSSSHKESSKTKPSRPSSQSSKKEMLPPPPVSSSSQKPAKPAL 1982
>L13773-1|AAA58360.1| 1210|Homo sapiens AF-4 protein.
Length = 1210
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 128 ASPSSTFKRS*RTWPARATMQ-VKHQRWPKPPELSPIYLPVSPVM 259
+S SS+ K S +T P+R + Q K + P PP S P P +
Sbjct: 838 SSSSSSHKESSKTKPSRPSSQSSKKEMLPPPPVSSSSQKPAKPAL 882
>L12141-1|AAA58477.1| 347|Homo sapiens fork head-related protein
protein.
Length = 347
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 206 WPKPPELSPIYLPVSPVMPVQPLTS 280
W PE +Y PV+PV + PL S
Sbjct: 15 WSYYPEAGEVYSPVTPVPTMAPLNS 39
>BT006720-1|AAP35366.1| 350|Homo sapiens forkhead box A3 protein.
Length = 350
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 206 WPKPPELSPIYLPVSPVMPVQPLTS 280
W PE +Y PV+PV + PL S
Sbjct: 15 WSYYPEAGEVYSPVTPVPTMAPLNS 39
>BC114930-1|AAI14931.1| 1211|Homo sapiens AF4/FMR2 family, member 1
protein.
Length = 1211
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 128 ASPSSTFKRS*RTWPARATMQ-VKHQRWPKPPELSPIYLPVSPVM 259
+S SS+ K S +T P+R + Q K + P PP S P P +
Sbjct: 838 SSSSSSHKESSKTKPSRPSSQSSKKEMLPPPPVSSSSQKPAKPAL 882
>BC016024-1|AAH16024.1| 350|Homo sapiens forkhead box A3 protein.
Length = 350
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 206 WPKPPELSPIYLPVSPVMPVQPLTS 280
W PE +Y PV+PV + PL S
Sbjct: 15 WSYYPEAGEVYSPVTPVPTMAPLNS 39
>BC014001-1|AAH14001.2| 445|Homo sapiens UBX domain containing 8
protein.
Length = 445
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 167 WPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLT 277
+P R + + WP PP L L + V+ VQ LT
Sbjct: 407 FPRRVLPCIPSEEWPNPPTLQEAGLSHTEVLFVQDLT 443
>BC006145-1|AAH06145.2| 445|Homo sapiens UBX domain containing 8
protein.
Length = 445
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 167 WPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLT 277
+P R + + WP PP L L + V+ VQ LT
Sbjct: 407 FPRRVLPCIPSEEWPNPPTLQEAGLSHTEVLFVQDLT 443
>BC001069-1|AAH01069.2| 445|Homo sapiens UBX domain containing 8
protein.
Length = 445
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 167 WPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLT 277
+P R + + WP PP L L + V+ VQ LT
Sbjct: 407 FPRRVLPCIPSEEWPNPPTLQEAGLSHTEVLFVQDLT 443
>AK223473-1|BAD97193.1| 350|Homo sapiens forkhead box A3 variant
protein.
Length = 350
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 206 WPKPPELSPIYLPVSPVMPVQPLTS 280
W PE +Y PV+PV + PL S
Sbjct: 15 WSYYPEAGEVYSPVTPVPTMAPLNS 39
>AF176114-1|AAD51980.1| 350|Homo sapiens hepatocyte nuclear
factor-3 gamma protein.
Length = 350
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 206 WPKPPELSPIYLPVSPVMPVQPLTS 280
W PE +Y PV+PV + PL S
Sbjct: 15 WSYYPEAGEVYSPVTPVPTMAPLNS 39
>AB088120-1|BAC22491.1| 445|Homo sapiens ETEA protein.
Length = 445
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 167 WPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLT 277
+P R + + WP PP L L + V+ VQ LT
Sbjct: 407 FPRRVLPCIPSEEWPNPPTLQEAGLSHTEVLFVQDLT 443
>AB020694-1|BAA74910.1| 443|Homo sapiens KIAA0887 protein protein.
Length = 443
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 167 WPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLT 277
+P R + + WP PP L L + V+ VQ LT
Sbjct: 405 FPRRVLPCIPSEEWPNPPTLQEAGLSHTEVLFVQDLT 441
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.311 0.126 0.350
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,033,777
Number of Sequences: 237096
Number of extensions: 906784
Number of successful extensions: 2094
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2094
length of database: 76,859,062
effective HSP length: 77
effective length of database: 58,602,670
effective search space used: 1347861410
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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