Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31679
(656 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1142.04 |||Noc2p-Noc3p complex subunit Noc2 family |Schizosa... 29 0.45
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 28 1.4
SPAC57A10.02 |cdr2||GIN4 family protein kinase Cdr2|Schizosaccha... 28 1.4
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 27 1.8
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 27 2.4
SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|c... 27 3.1
SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual 26 4.2
SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase Snf21|... 26 4.2
SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory sub... 26 5.5
SPBC1347.01c |rev1|SPBC215.16c|deoxycytidyl transferase Rev1 |Sc... 26 5.5
SPBC947.06c |||spermidine family transporter |Schizosaccharomyce... 25 7.3
SPCC970.04c |mob2||protein kinase activator Mob2|Schizosaccharom... 25 7.3
SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2 |Schiz... 25 7.3
SPBC543.07 |pek1|skh1, mkk1|MAP kinase kinase Pek1 |Schizosaccha... 25 9.6
SPBP23A10.09 |||GINS complex subunit Psf1 |Schizosaccharomyces p... 25 9.6
SPAC13G6.13 ||SPAC24B11.02|sequence orphan|Schizosaccharomyces p... 25 9.6
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 25 9.6
>SPAC1142.04 |||Noc2p-Noc3p complex subunit Noc2 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 707
Score = 29.5 bits (63), Expect = 0.45
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +2
Query: 53 EELTNYIDGDAISTHKRRQL--ENKVLSVKELFDDVPEEYLSHKEKYENAIRKSVLLYKV 226
EEL + DA S+ KR+ L EN S E ++ + S++++ E K YK
Sbjct: 80 EELDSANSNDAGSSRKRKNLPNENTQDSTSESSEEEEDGLESYQKQLEGLKEKDPEFYKF 139
Query: 227 LEEIKDPNETEMQNART 277
LE+ D + E A T
Sbjct: 140 LEQ-NDQDLLEFNAAET 155
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 27.9 bits (59), Expect = 1.4
Identities = 26/113 (23%), Positives = 47/113 (41%), Gaps = 3/113 (2%)
Frame = +2
Query: 149 DVPEEYLSHKEKYENAIRKSVLLYKVLEEIKDPNETEMQNARTFFRSLLPFAIFKDNSPF 328
++ ++YL K + N+I + L L + DP+ T M R R K NS
Sbjct: 1438 ELEDQYLERKRRRRNSISYTELTLDELNTVDDPSSTLMPRKRGRPRK-------KTNSGS 1490
Query: 329 SLHYSMFVPAIIAQANDEQKKYWLKRAMN---TEIIGTYAQTELGHGTFIRGL 478
SL + + +A++ + + ++A+ EI + G F+ GL
Sbjct: 1491 SLSTPLSQESSLARSGRKNTPSYKQKALRRYCMEIFERLYNLQSEDGRFVNGL 1543
>SPAC57A10.02 |cdr2||GIN4 family protein kinase
Cdr2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 27.9 bits (59), Expect = 1.4
Identities = 9/15 (60%), Positives = 14/15 (93%)
Frame = -1
Query: 455 DPVLSEHMSLLFRCS 411
DP++ +H+SL+FRCS
Sbjct: 283 DPLIVQHLSLVFRCS 297
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 27.5 bits (58), Expect = 1.8
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -1
Query: 533 WDCVARTPQFRRHMLQSSPDLG*T-YRDPVLSEHMSLLFRCSLPSSASI 390
W CV++ H LQS PDL T + D + +MS+ SLPS S+
Sbjct: 285 WICVSKKAPSASHFLQSCPDLSATIFYD--IEAYMSV--TSSLPSIQSL 329
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 27.1 bits (57), Expect = 2.4
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +2
Query: 26 ERKKCDFDVEELTNYIDGDAISTHKRRQLENKVLSVKELFDDVPEEYLSHKEKYENAIR 202
ERKK F N ++ A+++ K + K + K + D++ + +L H K+E IR
Sbjct: 659 ERKKEKFIRTVFLNALEVQAVNS-KLAEALTKRQNYKPIVDNIADIFLEHVPKFEPFIR 716
>SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 594
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1
Query: 176 CDSNTLRVHHRTALSRLALCSP 111
CD N +RVHH+ LS ++L +P
Sbjct: 285 CDLNCIRVHHKLRLS-ISLLNP 305
>SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1496
Score = 26.2 bits (55), Expect = 4.2
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Frame = +2
Query: 221 KVLEEIKDPNETEMQNARTFFRSLLPFAIFKDNSPFSLHYSMFVP---AIIAQANDEQKK 391
K+LE +TE A TF +S+ A++ P + Y ++ ++ Q +D+Q+
Sbjct: 1354 KILEHFDFILDTEA--ASTFPKSIT--AVYSWGKP-NFRYVQYIHRTGTVLVQIDDDQRF 1408
Query: 392 YWLKRAMNTEIIGTYAQTELGHGTFIRGLETTA 490
WL ++ + + T+ T L+ TA
Sbjct: 1409 LWLPNRLHNSKVSKLSFTKSNKSTLNPNLKETA 1441
>SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase
Snf21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1199
Score = 26.2 bits (55), Expect = 4.2
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +2
Query: 155 PEEYLSHKEKYE-NAIRKSV--LLYKVLEEIKDPNETEMQNARTF 280
P+ Y+ K +AIRK + YK LE +K T NART+
Sbjct: 1102 PDYYMIIKSPIALDAIRKHINGTFYKTLEAMKSDLMTMFNNARTY 1146
>SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory
subunit Ekc1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 838
Score = 25.8 bits (54), Expect = 5.5
Identities = 15/51 (29%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Frame = +2
Query: 125 LSVKELFDD--VPEEYLSHKEKYENAIRKSVLLYKVLEEIKDPNETEMQNA 271
+++KEL ++ V +E SH K + K +L ++++ I + +ETE+ +A
Sbjct: 28 INLKELLEENGVLDECKSHNPKLLEYLCKPEVLSQLIDYILEVDETEIPSA 78
>SPBC1347.01c |rev1|SPBC215.16c|deoxycytidyl transferase Rev1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 935
Score = 25.8 bits (54), Expect = 5.5
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 116 NKVLSVKELFDDVPEEYLSHKEKYENAIRKSVLLYKVLEEIKDPN 250
NK LS+K D+ +E K + ENA K + + K + I PN
Sbjct: 755 NKRLSLKSHADNKIDERGKKKIRQENAFDKLLQISKKSKTINKPN 799
>SPBC947.06c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 498
Score = 25.4 bits (53), Expect = 7.3
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +2
Query: 20 TNERKKCDFDV-EELTNYIDGDAIST 94
++E +KCD DV EEL +Y D D + T
Sbjct: 12 SSEIEKCDEDVEEELYSYPDSDFLVT 37
>SPCC970.04c |mob2||protein kinase activator
Mob2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 244
Score = 25.4 bits (53), Expect = 7.3
Identities = 9/31 (29%), Positives = 14/31 (45%)
Frame = -2
Query: 643 EWLDAVVFPFYVQLGHYYTVISCVCQTSGPP 551
EW+ V+ + L H+Y V + C P
Sbjct: 84 EWVALNVYELFTYLNHFYDVFATFCTVKTCP 114
>SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1273
Score = 25.4 bits (53), Expect = 7.3
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 287 SLLPFAIFKDNSPFSLHYSMFVPAIIAQANDE 382
S LP+A+ SP ++HY FV + + ND+
Sbjct: 779 SQLPWALQSYPSPLNIHYEKFVSKVTIE-NDK 809
>SPBC543.07 |pek1|skh1, mkk1|MAP kinase kinase Pek1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 363
Score = 25.0 bits (52), Expect = 9.6
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +2
Query: 158 EEYLSHKEKYENAIRKSVLLYKVLEEIKDPNETEMQNARTFFRSLL 295
EEY+SH E+ +N + E K E ++++TF S L
Sbjct: 17 EEYISHPERNDNQGIVEITDLVFSSESKLTQRKESRDSKTFVPSFL 62
>SPBP23A10.09 |||GINS complex subunit Psf1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 202
Score = 25.0 bits (52), Expect = 9.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1
Query: 380 HH*LAQL*RERTWSNGGRMESC 315
H+ Q R+ WS G RMESC
Sbjct: 92 HNLRLQRLRQYCWSGGKRMESC 113
>SPAC13G6.13 ||SPAC24B11.02|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 115
Score = 25.0 bits (52), Expect = 9.6
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 344 MFVPAIIAQANDEQKKYWLKRAMNTEIIGTYAQTE 448
MF +I +AND + KY+ +R T +I Y +++
Sbjct: 1 MFQLPMIVEANDMKIKYYKRRNCYTLLIFKYKESK 35
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 25.0 bits (52), Expect = 9.6
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +2
Query: 182 KYENAIRKSVLLYKVLEEIKD 244
KY++AIRK + L++ +E+ D
Sbjct: 15 KYQDAIRKCIALFQTVEQWPD 35
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,803,991
Number of Sequences: 5004
Number of extensions: 60117
Number of successful extensions: 198
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 297805304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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