Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31679
(656 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0023 + 227014-227166,227893-228001,228096-228157,228284-22... 147 8e-36
06_02_0320 - 14347195-14347443,14347573-14347674,14347747-143478... 97 1e-20
11_06_0340 - 22500411-22500566,22500660-22500783,22500914-225010... 67 1e-11
02_04_0287 + 21600047-21600478 31 0.61
01_01_0413 - 3107668-3107796,3107879-3107971,3108082-3108253,310... 31 0.81
03_02_0900 - 12262149-12262565,12262924-12263061,12263387-122634... 30 1.9
01_06_0924 - 33058194-33058697,33058798-33060147,33060234-330603... 30 1.9
11_01_0266 - 2010572-2011879 29 4.3
06_02_0283 + 13726047-13726090,13726160-13726266,13726515-137266... 29 4.3
01_05_0032 + 17380349-17381088,17382720-17382746,17382870-173830... 28 5.7
10_08_0781 + 20509033-20509714,20510048-20510191,20510604-205107... 28 7.5
01_01_0681 + 5235623-5235873,5235958-5236285,5236786-5236935,523... 28 7.5
01_01_0623 + 4672581-4673413,4674274-4674389,4674694-4674902,467... 28 7.5
12_01_0264 - 1929022-1930212 27 9.9
04_04_1410 + 33363784-33364086,33364221-33364280,33364388-333644... 27 9.9
03_05_0070 - 20478396-20478505,20478605-20478780,20481162-204812... 27 9.9
02_03_0171 + 15945591-15945681,15947068-15947138,15947715-159478... 27 9.9
>06_01_0023 +
227014-227166,227893-228001,228096-228157,228284-228493,
228609-228696,228774-228936,229037-229235,229456-229653,
229887-230018,230182-230302,230453-230563,230710-230779,
230880-231063,231137-231346
Length = 669
Score = 147 bits (356), Expect = 8e-36
Identities = 85/211 (40%), Positives = 121/211 (57%), Gaps = 1/211 (0%)
Frame = +2
Query: 26 ERKKCDFDVEELTNYIDGDAISTHKRRQLENKVLSVKELFDDVPEEYLSHKEKYENAIRK 205
ER FDVE + G + ++ V S +F L KE +++ +RK
Sbjct: 15 ERATAQFDVEHMKVAWAGSRHAVDVADRMARLVAS-DPVFRKDNRTMLPRKELFKDTLRK 73
Query: 206 SVLLYKVLEEIKDPNETEMQNARTFFRSLLPFAIFKDNSPF-SLHYSMFVPAIIAQANDE 382
+ +K + E++ E +LL ++ D + LH+ MFVPAI Q +E
Sbjct: 74 AAHAWKRIVELRLTEEEA---------NLL--RLYVDQPGYVDLHWGMFVPAIKGQGTEE 122
Query: 383 QKKYWLKRAMNTEIIGTYAQTELGHGTFIRGLETTATYDVETEEFVLHSPTLTAYKWWPG 562
Q+K WL A +IIG YAQTELGHG+ ++GLETTAT+D +T+EFV+HSPTLT+ KWWPG
Sbjct: 123 QQKKWLPLAYRFQIIGCYAQTELGHGSNVQGLETTATFDPKTDEFVIHSPTLTSSKWWPG 182
Query: 563 SLAHTANYCVVMAQLNIKGKNYGIQPFMVQL 655
L + + VV A+L +GK+YGI F+VQL
Sbjct: 183 GLGKASTHAVVYARLITEGKDYGIHGFIVQL 213
>06_02_0320 -
14347195-14347443,14347573-14347674,14347747-14347851,
14347938-14348084,14348171-14348290,14348743-14348878,
14349198-14349328,14350854-14350928,14351040-14351139,
14351213-14351385,14351474-14351581,14351674-14351791,
14353477-14353970
Length = 685
Score = 96.7 bits (230), Expect = 1e-20
Identities = 43/108 (39%), Positives = 67/108 (62%)
Frame = +2
Query: 332 LHYSMFVPAIIAQANDEQKKYWLKRAMNTEIIGTYAQTELGHGTFIRGLETTATYDVETE 511
+H+ ++ AI WL N I G ++ TELGHG+ +RG+ET ATYD++T
Sbjct: 160 VHFFLWGSAIKFLGTKRHHDKWLSDTENYVIKGCFSMTELGHGSNVRGIETVATYDIKTR 219
Query: 512 EFVLHSPTLTAYKWWPGSLAHTANYCVVMAQLNIKGKNYGIQPFMVQL 655
EFV+++P +A K+W G A+ A + +V AQL+I G+N G+ F+ Q+
Sbjct: 220 EFVINTPCESAQKYWIGGAANHATHTIVFAQLHINGRNEGVHAFVAQI 267
>11_06_0340 -
22500411-22500566,22500660-22500783,22500914-22501080,
22501157-22501336,22501544-22502427,22502728-22502843,
22503745-22504217
Length = 699
Score = 67.3 bits (157), Expect = 1e-11
Identities = 33/103 (32%), Positives = 57/103 (55%)
Frame = +2
Query: 332 LHYSMFVPAIIAQANDEQKKYWLKRAMNTEIIGTYAQTELGHGTFIRGLETTATYDVETE 511
+ YS++ +II + + + N + G +A TEL HG+ ++ L+TTAT+D T+
Sbjct: 155 VQYSLWGGSIINLGTKKHRDRFFDGIDNLDYPGCFAMTELHHGSNVQALQTTATFDPVTD 214
Query: 512 EFVLHSPTLTAYKWWPGSLAHTANYCVVMAQLNIKGKNYGIQP 640
EF++++P A KWW G+ A + V A+L + + G P
Sbjct: 215 EFIINTPNDGAIKWWIGNAALHGKFATVFARLILPLQGKGGDP 257
>02_04_0287 + 21600047-21600478
Length = 143
Score = 31.5 bits (68), Expect = 0.61
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 368 QANDEQKKYWLKRAMNTEIIGTYAQTELGHGTFIRGLETTATYDVE 505
+A + ++ +W A+N E+ T A + LG G GL+ T T VE
Sbjct: 86 RALERREPHWPDLAVNEELTSTAAPSLLGKGALRAGLDRTLTNRVE 131
>01_01_0413 -
3107668-3107796,3107879-3107971,3108082-3108253,
3108341-3108417,3108514-3108673,3108766-3108875,
3109384-3109443,3109545-3109618,3109748-3109871,
3110795-3110872,3111169-3111275,3112572-3112673,
3112800-3112815
Length = 433
Score = 31.1 bits (67), Expect = 0.81
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 332 LHYSMFVPAIIAQANDEQKKYWLKRAMNTEIIGTYAQTELGHGTFIRGLETTAT 493
+H S+ + I ++ QK+ +L +G +A TE HG+ L TTAT
Sbjct: 133 VHSSLAMVTIALCGSEVQKQKYLPSLAQLTAVGCWALTEPNHGSDASSLITTAT 186
>03_02_0900 -
12262149-12262565,12262924-12263061,12263387-12263446,
12263557-12263619,12264181-12264243,12264420-12264482,
12265076-12265153,12265673-12266080
Length = 429
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +2
Query: 53 EELTNYIDGDAISTHKRRQLENKVLSVKELFDDVPEEYLSHKEK---YENAIRKSVLLYK 223
E+L N +G + K L+NKV S++ + D + + S KE+ E + ++ K
Sbjct: 188 EKLNNLQNGYDVLIKKEVALDNKVRSIEVINDALTHQETSLKERLSGLEETNKVLLVQVK 247
Query: 224 VLEEIKDPNETEMQ 265
VLEE + E Q
Sbjct: 248 VLEEASNNTVEESQ 261
>01_06_0924 -
33058194-33058697,33058798-33060147,33060234-33060303,
33060918-33060976
Length = 660
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/64 (34%), Positives = 29/64 (45%)
Frame = -1
Query: 578 LCVPNFRATICTLLAWDCVARTPQFRRHMLQSSPDLG*TYRDPVLSEHMSLLFRCSLPSS 399
L VPN T+ TL DCV R + + S+ LG Y P + E S L S
Sbjct: 379 LLVPNLGYTVETLYDIDCVQRILDY---FMSSTDGLGTGYTSPAVVEEGSQLGALHAGSP 435
Query: 398 ASIS 387
+S+S
Sbjct: 436 SSLS 439
>11_01_0266 - 2010572-2011879
Length = 435
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 485 TATYDVETEEFVLHSPTLTAYKWWPGSLA 571
T +D TE+ V+H P L + KW P +A
Sbjct: 166 TIIFDTRTEK-VIHGPALNSAKWCPALMA 193
>06_02_0283 +
13726047-13726090,13726160-13726266,13726515-13726621,
13726735-13726812,13734948-13735071,13735585-13735658,
13735742-13735801,13737561-13737670,13737806-13737965,
13738218-13738360,13738461-13738605,13738727-13738819,
13740070-13740186
Length = 453
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 326 FSLHYSMFVPAIIAQANDE-QKKYWLKRAMNTEIIGTYAQTELGHGTFIRGLETTA 490
F L S IAQ E QK+ +L+ + + YA +E HG+ L TTA
Sbjct: 141 FCLVQSCLAMVSIAQLGSEAQKEKYLRPLSKMQKVCVYALSEPNHGSDASSLNTTA 196
>01_05_0032 +
17380349-17381088,17382720-17382746,17382870-17383038,
17383259-17383327,17385364-17385699
Length = 446
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 256 SFIWVFDFLQYFVQQY*FSYRILVFLFVTQILF 158
+ IWV + V Y Y ILVF+FV +LF
Sbjct: 158 NLIWVVSRMHVQVDHYPIWYIILVFVFVHGVLF 190
>10_08_0781 +
20509033-20509714,20510048-20510191,20510604-20510719,
20511356-20511520,20511822-20512043,20512613-20512735
Length = 483
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 406 GNEHRNNRDICSDRTGSRYVHPRSGDDC 489
GN ++N+ +DR SRYV +DC
Sbjct: 11 GNNYQNSNRFQNDRFASRYVDGNDTEDC 38
>01_01_0681 +
5235623-5235873,5235958-5236285,5236786-5236935,
5237255-5237503,5238581-5238670,5238781-5238966,
5239477-5239598,5242915-5243011
Length = 490
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +2
Query: 473 GLETTATYDVETEEFVLHSPTLTAYKWWPGSL 568
G T T D E FVL S W+P SL
Sbjct: 96 GSATVVTADAEVSRFVLQSDARAFVPWYPRSL 127
>01_01_0623 + 4672581-4673413,4674274-4674389,4674694-4674902,
4675953-4676072,4676185-4676313,4676394-4676442,
4676899-4676970,4677574-4677707,4677798-4677915,
4678332-4678541,4678630-4678942,4679539-4679632,
4679854-4679962,4680243-4680514,4680597-4680724,
4680832-4681066,4681570-4681758,4681845-4682128,
4682218-4682398,4682486-4682728,4682904-4682986,
4683119-4683227,4687996-4688091,4688675-4688764,
4688881-4689129,4689233-4689412,4690179-4690250,
4691385-4691474,4691605-4691705,4691794-4691959
Length = 1757
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 494 YDVETEEFVLHSPTLTAYKWWPGSL 568
Y+ FV TL AY+WW GS+
Sbjct: 970 YEDAFNRFVDEINTLAAYQWWEGSI 994
>12_01_0264 - 1929022-1930212
Length = 396
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 485 TATYDVETEEFVLHSPTLTAYKWWPGSLA 571
T +D TE+ V+H P L + KW P ++
Sbjct: 103 TVIFDTRTEK-VVHGPALNSAKWCPALMS 130
>04_04_1410 +
33363784-33364086,33364221-33364280,33364388-33364464,
33365032-33365089,33365179-33365262,33365358-33365394,
33365855-33365924,33366655-33366849,33366947-33367039,
33367187-33367418,33367515-33367598,33368205-33368301,
33368510-33368577,33368662-33368739,33368823-33368945,
33369059-33369172,33369288-33369368
Length = 617
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +2
Query: 83 AISTHKRRQLENKVLSVKELFDDVPEEYLSHKEKYENAIRKSVLLYKVLEEIKDPNETEM 262
A++ R + E V V +L ++Y + E+YE +RK ++ L D T+
Sbjct: 102 AMAEEARARYEKAVFKVVDL-----DDYAAEDEEYEEKLRKETIVLLFLATYGDGEPTD- 155
Query: 263 QNARTFFR 286
NA F++
Sbjct: 156 -NAARFYK 162
>03_05_0070 -
20478396-20478505,20478605-20478780,20481162-20481265,
20481346-20481504,20481718-20481857,20482222-20482311,
20482902-20482970,20484295-20484516,20486175-20486293,
20486377-20486492,20488058-20488146,20488790-20488883
Length = 495
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 56 ELTNYIDGDAISTHKRRQLENKVLSVK-ELFDDVPEEYLSH 175
EL Y GD+ +K++ L+ K LF DVPEE+ S+
Sbjct: 278 ELEGYNTGDSDDINKKKALDALNRMEKWNLFKDVPEEHHSY 318
>02_03_0171 +
15945591-15945681,15947068-15947138,15947715-15947817,
15948189-15948328,15948535-15948693,15948775-15948878,
15950373-15950548,15952643-15952832,15953704-15953803,
15954171-15954339,15954908-15954990,15955073-15955149,
15955386-15955557
Length = 544
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 56 ELTNYIDGDAISTHKRRQLENKVLSVK-ELFDDVPEEYLSH 175
EL Y GD+ +K++ L+ K LF DVPEE+ S+
Sbjct: 100 ELEGYNTGDSDDINKKKALDALNRMEKWNLFKDVPEEHHSY 140
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,017,484
Number of Sequences: 37544
Number of extensions: 377045
Number of successful extensions: 981
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -