Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31671
(623 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY283618-1|AAP37483.1| 1564|Homo sapiens hypothetical protein pr... 31 3.3
AL831833-1|CAD38544.1| 796|Homo sapiens hypothetical protein pr... 31 3.3
AL445232-2|CAI16506.2| 1564|Homo sapiens zinc finger CCCH-type c... 31 3.3
AL445232-1|CAI16505.1| 1668|Homo sapiens zinc finger CCCH-type c... 31 3.3
AL157758-3|CAM13064.1| 1564|Homo sapiens zinc finger CCCH-type c... 31 3.3
AL157758-2|CAI10903.1| 1668|Homo sapiens zinc finger CCCH-type c... 31 3.3
AB020660-1|BAA74876.1| 967|Homo sapiens KIAA0853 protein protein. 31 3.3
BC007570-1|AAH07570.1| 649|Homo sapiens FBF1 protein protein. 30 5.8
AJ289417-1|CAB93299.1| 112|Homo sapiens immunoglobulin heavy ch... 30 5.8
>AY283618-1|AAP37483.1| 1564|Homo sapiens hypothetical protein
protein.
Length = 1564
Score = 31.1 bits (67), Expect = 3.3
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = -1
Query: 200 HDQRRSRHQQGIISR*KTGRPSLLKSRRRNEVSSP----YQGGEESDQIQHLLGRDLASP 33
HD+R+S+ + G PS +S +R SP Y G++ ++ LL + + P
Sbjct: 817 HDERKSKKRYR-----NEGSPSPRQSPKRRREHSPDSDAYNSGDDKNEKHRLLSQ-VVRP 870
Query: 32 QESRSL 15
QESRSL
Sbjct: 871 QESRSL 876
>AL831833-1|CAD38544.1| 796|Homo sapiens hypothetical protein
protein.
Length = 796
Score = 31.1 bits (67), Expect = 3.3
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = -1
Query: 200 HDQRRSRHQQGIISR*KTGRPSLLKSRRRNEVSSP----YQGGEESDQIQHLLGRDLASP 33
HD+R+S+ + G PS +S +R SP Y G++ ++ LL + + P
Sbjct: 642 HDERKSKKRYR-----NEGSPSPRQSPKRRREHSPDSDAYNSGDDKNEKHRLLSQ-VVRP 695
Query: 32 QESRSL 15
QESRSL
Sbjct: 696 QESRSL 701
>AL445232-2|CAI16506.2| 1564|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1564
Score = 31.1 bits (67), Expect = 3.3
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = -1
Query: 200 HDQRRSRHQQGIISR*KTGRPSLLKSRRRNEVSSP----YQGGEESDQIQHLLGRDLASP 33
HD+R+S+ + G PS +S +R SP Y G++ ++ LL + + P
Sbjct: 817 HDERKSKKRYR-----NEGSPSPRQSPKRRREHSPDSDAYNSGDDKNEKHRLLSQ-VVRP 870
Query: 32 QESRSL 15
QESRSL
Sbjct: 871 QESRSL 876
>AL445232-1|CAI16505.1| 1668|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1668
Score = 31.1 bits (67), Expect = 3.3
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = -1
Query: 200 HDQRRSRHQQGIISR*KTGRPSLLKSRRRNEVSSP----YQGGEESDQIQHLLGRDLASP 33
HD+R+S+ + G PS +S +R SP Y G++ ++ LL + + P
Sbjct: 817 HDERKSKKRYR-----NEGSPSPRQSPKRRREHSPDSDAYNSGDDKNEKHRLLSQ-VVRP 870
Query: 32 QESRSL 15
QESRSL
Sbjct: 871 QESRSL 876
>AL157758-3|CAM13064.1| 1564|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1564
Score = 31.1 bits (67), Expect = 3.3
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = -1
Query: 200 HDQRRSRHQQGIISR*KTGRPSLLKSRRRNEVSSP----YQGGEESDQIQHLLGRDLASP 33
HD+R+S+ + G PS +S +R SP Y G++ ++ LL + + P
Sbjct: 817 HDERKSKKRYR-----NEGSPSPRQSPKRRREHSPDSDAYNSGDDKNEKHRLLSQ-VVRP 870
Query: 32 QESRSL 15
QESRSL
Sbjct: 871 QESRSL 876
>AL157758-2|CAI10903.1| 1668|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1668
Score = 31.1 bits (67), Expect = 3.3
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = -1
Query: 200 HDQRRSRHQQGIISR*KTGRPSLLKSRRRNEVSSP----YQGGEESDQIQHLLGRDLASP 33
HD+R+S+ + G PS +S +R SP Y G++ ++ LL + + P
Sbjct: 817 HDERKSKKRYR-----NEGSPSPRQSPKRRREHSPDSDAYNSGDDKNEKHRLLSQ-VVRP 870
Query: 32 QESRSL 15
QESRSL
Sbjct: 871 QESRSL 876
>AB020660-1|BAA74876.1| 967|Homo sapiens KIAA0853 protein protein.
Length = 967
Score = 31.1 bits (67), Expect = 3.3
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = -1
Query: 200 HDQRRSRHQQGIISR*KTGRPSLLKSRRRNEVSSP----YQGGEESDQIQHLLGRDLASP 33
HD+R+S+ + G PS +S +R SP Y G++ ++ LL + + P
Sbjct: 116 HDERKSKKRYR-----NEGSPSPRQSPKRRREHSPDSDAYNSGDDKNEKHRLLSQ-VVRP 169
Query: 32 QESRSL 15
QESRSL
Sbjct: 170 QESRSL 175
>BC007570-1|AAH07570.1| 649|Homo sapiens FBF1 protein protein.
Length = 649
Score = 30.3 bits (65), Expect = 5.8
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = -1
Query: 359 LGRSISDVRCKDLGCQQRVVDEVEG--NEGQERLGQEPWTLPADVAKVKHLGPKAHDQRR 186
LG+ D+ ++ QQ V+ ++E NE L QE W + A+ +K + + +QR+
Sbjct: 303 LGQQQRDME-EERSRQQEVIGKMEARLNEQSRLLEQERWRVTAEQSKAESMQRALEEQRK 361
Query: 185 SRHQQGIISR 156
QQ + R
Sbjct: 362 VTAQQMAMER 371
>AJ289417-1|CAB93299.1| 112|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 112
Score = 30.3 bits (65), Expect = 5.8
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -1
Query: 611 VHRSVSVQQIRLNSLFSDKRILGFISVG*GSGTGRYYGAYFG 486
V RS+S ++LNSL + + + + GSG +YY Y+G
Sbjct: 63 VDRSISTAYLQLNSLKASDTAMYYCARQGGSGWSKYYFDYWG 104
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,955,406
Number of Sequences: 237096
Number of extensions: 1974000
Number of successful extensions: 9230
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9227
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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